RNA–Protein interactions for RNA: ENST00000613045.1

AP001043.1-206, humanhuman

TSL 5 BASIC

Gene AP001043.1, Length 730 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001043.1-206ENST00000613045 TGFB2P61812 414 aa17.23■□□□□ 0.35
AP001043.1-206ENST00000613045 ITPK1Q13572 414 aa17.23■□□□□ 0.35
AP001043.1-206ENST00000613045 SMARCC1Q92922 1105 aaPredicted RBP17.23■□□□□ 0.35
AP001043.1-206ENST00000613045 RTL1A6NKG5 1358 aa17.23■□□□□ 0.35
AP001043.1-206ENST00000613045 TNRC6CQ9HCJ0 1690 aaKnown RBP17.23■□□□□ 0.35
AP001043.1-206ENST00000613045 FYB1O15117 783 aa17.22■□□□□ 0.35
AP001043.1-206ENST00000613045 GNPATO15228 680 aa17.22■□□□□ 0.35
AP001043.1-206ENST00000613045 KCNA3P22001 575 aa17.22■□□□□ 0.35
AP001043.1-206ENST00000613045 HSP90AB2PQ58FF8 381 aa17.22■□□□□ 0.35
AP001043.1-206ENST00000613045 TESK2Q96S53 571 aa17.22■□□□□ 0.35
AP001043.1-206ENST00000613045 GGNBP2Q9H3C7 697 aa17.22■□□□□ 0.35
AP001043.1-206ENST00000613045 C10orf71Q711Q0 1435 aa17.21■□□□□ 0.35
AP001043.1-206ENST00000613045 SMG6Q86US8 1419 aaKnown RBP17.21■□□□□ 0.35
AP001043.1-206ENST00000613045 C4AP0C0L4 1744 aa17.21■□□□□ 0.35
AP001043.1-206ENST00000613045 CCDC88AQ3V6T2 1871 aa17.2■□□□□ 0.34
AP001043.1-206ENST00000613045 ST20-MTHFSA0A0A6YYL1 179 aa17.2■□□□□ 0.34
AP001043.1-206ENST00000613045 LOC102724428A0A0B4J2F2 783 aa17.2■□□□□ 0.34
AP001043.1-206ENST00000613045 SIK1P57059 783 aa17.2■□□□□ 0.34
AP001043.1-206ENST00000613045 NSD3Q9BZ95 1437 aa17.19■□□□□ 0.34
AP001043.1-206ENST00000613045 RNF181Q9P0P0 153 aa17.18■□□□□ 0.34
AP001043.1-206ENST00000613045 ASAP1Q9ULH1 1129 aa17.18■□□□□ 0.34
AP001043.1-206ENST00000613045 KDM2BQ8NHM5 1336 aa17.18■□□□□ 0.34
AP001043.1-206ENST00000613045 INSRP06213 1382 aa17.17■□□□□ 0.34
AP001043.1-206ENST00000613045 PLEKHG2Q9H7P9 1386 aa17.17■□□□□ 0.34
AP001043.1-206ENST00000613045 SLC24A1O60721 1099 aa17.16■□□□□ 0.34
AP001043.1-206ENST00000613045 ATP6V1AP38606 617 aa17.16■□□□□ 0.34
AP001043.1-206ENST00000613045 SMC1BQ8NDV3 1235 aa17.16■□□□□ 0.34
AP001043.1-206ENST00000613045 MYH14Q7Z406 1995 aaKnown RBP17.16■□□□□ 0.34
AP001043.1-206ENST00000613045 NKX1-1Q15270 411 aaPredicted RBP17.15■□□□□ 0.34
AP001043.1-206ENST00000613045 TMF1P82094 1093 aa17.14■□□□□ 0.33
AP001043.1-206ENST00000613045 DCAF5Q96JK2 942 aa17.14■□□□□ 0.33
AP001043.1-206ENST00000613045 CCDC87Q9NVE4 849 aa17.14■□□□□ 0.33
AP001043.1-206ENST00000613045 FLT4P35916 1363 aa17.14■□□□□ 0.33
AP001043.1-206ENST00000613045 ARHGEF1Q92888 912 aaKnown RBP17.13■□□□□ 0.33
AP001043.1-206ENST00000613045 SPG7Q9UQ90 795 aa17.13■□□□□ 0.33
AP001043.1-206ENST00000613045 COL5A3P25940 1745 aaPredicted RBP17.13■□□□□ 0.33
AP001043.1-206ENST00000613045 GYS1P13807 737 aa17.12■□□□□ 0.33
AP001043.1-206ENST00000613045 TRAPPC3LQ5T215 181 aa17.12■□□□□ 0.33
AP001043.1-206ENST00000613045 NLGN1Q8N2Q7 840 aa17.12■□□□□ 0.33
AP001043.1-206ENST00000613045 SLC4A9Q96Q91 983 aa17.12■□□□□ 0.33
AP001043.1-206ENST00000613045 TMOD3Q9NYL9 352 aa17.12■□□□□ 0.33
AP001043.1-206ENST00000613045 PIM2Q9P1W9 311 aa17.12■□□□□ 0.33
AP001043.1-206ENST00000613045 TONSLQ96HA7 1378 aa17.12■□□□□ 0.33
AP001043.1-206ENST00000613045 CHRNA5P30532 468 aa17.11■□□□□ 0.33
AP001043.1-206ENST00000613045 ATG3Q9NT62 314 aa17.11■□□□□ 0.33
AP001043.1-206ENST00000613045 KIF24Q5T7B8 1368 aa17.11■□□□□ 0.33
AP001043.1-206ENST00000613045 RASSF7Q02833 373 aa17.1■□□□□ 0.33
AP001043.1-206ENST00000613045 DALRD3Q5D0E6 543 aaKnown RBP17.1■□□□□ 0.33
AP001043.1-206ENST00000613045 EMILIN1Q9Y6C2 1016 aa17.1■□□□□ 0.33
AP001043.1-206ENST00000613045 PARP3Q9Y6F1 533 aa17.1■□□□□ 0.33
AP001043.1-206ENST00000613045 PPM1GO15355 546 aaPredicted RBP17.09■□□□□ 0.33
AP001043.1-206ENST00000613045 RTCBQ9Y3I0 505 aaKnown RBP17.09■□□□□ 0.33
AP001043.1-206ENST00000613045 TIAM2Q8IVF5 1701 aa17.08■□□□□ 0.32
AP001043.1-206ENST00000613045 PIAS4Q8N2W9 510 aaPredicted RBP17.08■□□□□ 0.32
AP001043.1-206ENST00000613045 FOXN1O15353 648 aa17.07■□□□□ 0.32
AP001043.1-206ENST00000613045 IFNL2Q8IZJ0 200 aa17.07■□□□□ 0.32
AP001043.1-206ENST00000613045 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.07■□□□□ 0.32
AP001043.1-206ENST00000613045 KDRP35968 1356 aa17.06■□□□□ 0.32
AP001043.1-206ENST00000613045 POTECB2RU33 542 aa17.06■□□□□ 0.32
AP001043.1-206ENST00000613045 PHKG2P15735 406 aa17.06■□□□□ 0.32
AP001043.1-206ENST00000613045 DDR1Q08345 913 aa17.06■□□□□ 0.32
AP001043.1-206ENST00000613045 SRP68Q9UHB9 627 aaKnown RBP17.06■□□□□ 0.32
AP001043.1-206ENST00000613045 MKRN1Q9UHC7 482 aaKnown RBP17.06■□□□□ 0.32
AP001043.1-206ENST00000613045 VEGFAP15692 232 aaPredicted RBP17.05■□□□□ 0.32
AP001043.1-206ENST00000613045 RFC4P35249 363 aa17.05■□□□□ 0.32
AP001043.1-206ENST00000613045 EYA1Q99502 592 aa17.05■□□□□ 0.32
AP001043.1-206ENST00000613045 CARD14Q9BXL6 1004 aa17.05■□□□□ 0.32
AP001043.1-206ENST00000613045 AFDNP55196 1824 aaKnown RBP17.05■□□□□ 0.32
AP001043.1-206ENST00000613045 KIF20BQ96Q89 1820 aa17.05■□□□□ 0.32
AP001043.1-206ENST00000613045 NCAPD2Q15021 1401 aa17.04■□□□□ 0.32
AP001043.1-206ENST00000613045 GLTPD2A6NH11 291 aa17.04■□□□□ 0.32
AP001043.1-206ENST00000613045 FKBP8Q14318 412 aa17.04■□□□□ 0.32
AP001043.1-206ENST00000613045 RBM42Q9BTD8 480 aaKnown RBP17.04■□□□□ 0.32
AP001043.1-206ENST00000613045 KDM6AO15550 1401 aaPredicted RBP17.04■□□□□ 0.32
AP001043.1-206ENST00000613045 ZNF831Q5JPB2 1677 aa17.04■□□□□ 0.32
AP001043.1-206ENST00000613045 WASHC2AQ641Q2 1341 aa17.03■□□□□ 0.32
AP001043.1-206ENST00000613045 RPS6KA4O75676 772 aa17.03■□□□□ 0.32
AP001043.1-206ENST00000613045 FAM161AQ3B820 660 aa17.02■□□□□ 0.32
AP001043.1-206ENST00000613045 RC3H1Q5TC82 1133 aaKnown RBP17.02■□□□□ 0.32
AP001043.1-206ENST00000613045 ADRA2BP18089 450 aa17.01■□□□□ 0.31
AP001043.1-206ENST00000613045 VIRMAQ69YN4 1812 aaKnown RBP17■□□□□ 0.31
AP001043.1-206ENST00000613045 CDCA8Q53HL2 280 aa17■□□□□ 0.31
AP001043.1-206ENST00000613045 ADAMTS7Q9UKP4 1686 aa17■□□□□ 0.31
AP001043.1-206ENST00000613045 DICER1Q9UPY3 1922 aaKnown RBP17■□□□□ 0.31
AP001043.1-206ENST00000613045 DLEC1Q9Y238 1755 aa17■□□□□ 0.31
AP001043.1-206ENST00000613045 CNTNAP4Q9C0A0 1308 aa16.99■□□□□ 0.31
AP001043.1-206ENST00000613045 POTEIP0CG38 1075 aa16.99■□□□□ 0.31
AP001043.1-206ENST00000613045 POTEJP0CG39 1038 aa16.99■□□□□ 0.31
AP001043.1-206ENST00000613045 ERVV-2B6SEH9 535 aa16.98■□□□□ 0.31
AP001043.1-206ENST00000613045 LMNB1P20700 586 aa16.98■□□□□ 0.31
AP001043.1-206ENST00000613045 PRDM10Q9NQV6 1147 aa16.98■□□□□ 0.31
AP001043.1-206ENST00000613045 POLRMTO00411 1230 aaKnown RBP16.97■□□□□ 0.31
AP001043.1-206ENST00000613045 POLKQ9UBT6 870 aa16.97■□□□□ 0.31
AP001043.1-206ENST00000613045 ZC3H4Q9UPT8 1303 aaKnown RBP16.96■□□□□ 0.31
AP001043.1-206ENST00000613045 TJP1Q07157 1748 aa16.96■□□□□ 0.31
AP001043.1-206ENST00000613045 TM4SF1P30408 202 aa16.96■□□□□ 0.31
AP001043.1-206ENST00000613045 CREBZFQ9NS37 354 aa16.96■□□□□ 0.31
AP001043.1-206ENST00000613045 USP42Q9H9J4 1324 aaKnown RBP16.96■□□□□ 0.3
AP001043.1-206ENST00000613045 LBX1P52954 281 aa16.95■□□□□ 0.3
AP001043.1-206ENST00000613045 EIF4A2Q14240 407 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms