RNA–Protein interactions for RNA: ENST00000612798.4

LSP1-217, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-217ENST00000612798 SLC52A2Q9HAB3 445 aa22.03■■□□□ 1.12
LSP1-217ENST00000612798 SMC4Q9NTJ3 1288 aa22.03■■□□□ 1.12
LSP1-217ENST00000612798 AFF2P51816 1311 aa22.03■■□□□ 1.12
LSP1-217ENST00000612798 TNNQ9UQP3 1299 aa22.02■■□□□ 1.12
LSP1-217ENST00000612798 THRAP3Q9Y2W1 955 aaKnown RBP22.02■■□□□ 1.12
LSP1-217ENST00000612798 SIPA1L3O60292 1781 aaPredicted RBP22.01■■□□□ 1.11
LSP1-217ENST00000612798 EXOC5O00471 708 aa22.01■■□□□ 1.11
LSP1-217ENST00000612798 HSP90AB1P08238 724 aaKnown RBP22.01■■□□□ 1.11
LSP1-217ENST00000612798 SLC39A6Q13433 755 aa22.01■■□□□ 1.11
LSP1-217ENST00000612798 FAM98CQ17RN3 349 aaKnown RBP22■■□□□ 1.11
LSP1-217ENST00000612798 BABAM1Q9NWV8 329 aa22■■□□□ 1.11
LSP1-217ENST00000612798 KDM3BQ7LBC6 1761 aa22■■□□□ 1.11
LSP1-217ENST00000612798 NKX1-1Q15270 411 aaPredicted RBP22■■□□□ 1.11
LSP1-217ENST00000612798 CABP4P57796 275 aa21.98■■□□□ 1.11
LSP1-217ENST00000612798 EIF4A1P60842 406 aaKnown RBP21.98■■□□□ 1.11
LSP1-217ENST00000612798 CANXP27824 592 aaKnown RBP21.98■■□□□ 1.11
LSP1-217ENST00000612798 BARGINQ6ZT62 677 aa21.98■■□□□ 1.11
LSP1-217ENST00000612798 DDB1Q16531 1140 aa21.97■■□□□ 1.11
LSP1-217ENST00000612798 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.97■■□□□ 1.11
LSP1-217ENST00000612798 EXOC6Q8TAG9 804 aa21.97■■□□□ 1.11
LSP1-217ENST00000612798 NECTIN2Q92692 538 aa21.97■■□□□ 1.11
LSP1-217ENST00000612798 ALDH1L2Q3SY69 923 aa21.96■■□□□ 1.11
LSP1-217ENST00000612798 MRPL50Q8N5N7 158 aaKnown RBP21.96■■□□□ 1.11
LSP1-217ENST00000612798 CRBNQ96SW2 442 aa21.96■■□□□ 1.11
LSP1-217ENST00000612798 NOB1Q9ULX3 412 aaKnown RBP21.96■■□□□ 1.11
LSP1-217ENST00000612798 MRC1P22897 1456 aa21.96■■□□□ 1.11
LSP1-217ENST00000612798 TNS2Q63HR2 1409 aa21.96■■□□□ 1.11
LSP1-217ENST00000612798 CDCA7Q9BWT1 371 aaPredicted RBP21.96■■□□□ 1.11
LSP1-217ENST00000612798 TOGARAM1Q9Y4F4 1720 aa21.95■■□□□ 1.11
LSP1-217ENST00000612798 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.95■■□□□ 1.1
LSP1-217ENST00000612798 PANK1Q8TE04 598 aa21.94■■□□□ 1.1
LSP1-217ENST00000612798 PRAMEF22A3QJZ6 481 aa21.94■■□□□ 1.1
LSP1-217ENST00000612798 ZNF790Q6PG37 636 aa21.94■■□□□ 1.1
LSP1-217ENST00000612798 MARCH10Q8NA82 808 aaPredicted RBP21.94■■□□□ 1.1
LSP1-217ENST00000612798 CLUAP1Q96AJ1 413 aa21.94■■□□□ 1.1
LSP1-217ENST00000612798 ZNF428Q96B54 188 aa21.94■■□□□ 1.1
LSP1-217ENST00000612798 ERVV-2B6SEH9 535 aa21.93■■□□□ 1.1
LSP1-217ENST00000612798 A0A0G2JS52 829 aa21.92■■□□□ 1.1
LSP1-217ENST00000612798 RLBP1P12271 317 aa21.92■■□□□ 1.1
LSP1-217ENST00000612798 MYT1Q01538 1121 aa21.92■■□□□ 1.1
LSP1-217ENST00000612798 GJD4Q96KN9 370 aaPredicted RBP21.92■■□□□ 1.1
LSP1-217ENST00000612798 EIF2S2P20042 333 aaKnown RBP21.91■■□□□ 1.1
LSP1-217ENST00000612798 GLI3P10071 1580 aa21.91■■□□□ 1.1
LSP1-217ENST00000612798 ZKSCAN2Q63HK3 967 aa21.9■■□□□ 1.1
LSP1-217ENST00000612798 ATRNO75882 1429 aa21.9■■□□□ 1.1
LSP1-217ENST00000612798 TRIM27P14373 513 aa21.9■■□□□ 1.1
LSP1-217ENST00000612798 ZNF496Q96IT1 587 aaPredicted RBP21.9■■□□□ 1.1
LSP1-217ENST00000612798 QTRT2Q9H974 415 aaKnown RBP21.89■■□□□ 1.09
LSP1-217ENST00000612798 GIGYF1O75420 1035 aaPredicted RBP21.88■■□□□ 1.09
LSP1-217ENST00000612798 SLC4A2P04920 1241 aa21.88■■□□□ 1.09
LSP1-217ENST00000612798 BRPF1P55201 1214 aaPredicted RBP21.88■■□□□ 1.09
LSP1-217ENST00000612798 FBXO41Q8TF61 875 aa21.88■■□□□ 1.09
LSP1-217ENST00000612798 TMOD3Q9NYL9 352 aa21.88■■□□□ 1.09
LSP1-217ENST00000612798 TRPC5Q9UL62 973 aaPredicted RBP21.88■■□□□ 1.09
LSP1-217ENST00000612798 COG6Q9Y2V7 657 aa21.88■■□□□ 1.09
LSP1-217ENST00000612798 HEG1Q9ULI3 1381 aa21.88■■□□□ 1.09
LSP1-217ENST00000612798 HDGFL1Q5TGJ6 251 aa21.88■■□□□ 1.09
LSP1-217ENST00000612798 ATF7IPQ6VMQ6 1270 aa21.88■■□□□ 1.09
LSP1-217ENST00000612798 G2E3Q7L622 706 aa21.88■■□□□ 1.09
LSP1-217ENST00000612798 TTC5Q8N0Z6 440 aa21.88■■□□□ 1.09
LSP1-217ENST00000612798 PIGBQ92521 554 aa21.88■■□□□ 1.09
LSP1-217ENST00000612798 ACSBG1Q96GR2 724 aa21.88■■□□□ 1.09
LSP1-217ENST00000612798 KIF16BQ96L93 1317 aa21.87■■□□□ 1.09
LSP1-217ENST00000612798 PDE3AQ14432 1141 aa21.87■■□□□ 1.09
LSP1-217ENST00000612798 SYTL4Q96C24 671 aaPredicted RBP21.87■■□□□ 1.09
LSP1-217ENST00000612798 PRIM1P49642 420 aaKnown RBP21.86■■□□□ 1.09
LSP1-217ENST00000612798 CCDC30Q5VVM6 783 aa21.86■■□□□ 1.09
LSP1-217ENST00000612798 ERICH6BQ5W0A0 696 aa21.86■■□□□ 1.09
LSP1-217ENST00000612798 DZIP1LQ8IYY4 767 aaKnown RBP21.86■■□□□ 1.09
LSP1-217ENST00000612798 ITGB4P16144 1822 aa21.85■■□□□ 1.09
LSP1-217ENST00000612798 ASAP1Q9ULH1 1129 aa21.85■■□□□ 1.09
LSP1-217ENST00000612798 KAT6BQ8WYB5 2073 aa21.84■■□□□ 1.09
LSP1-217ENST00000612798 ANXA1P04083 346 aa21.84■■□□□ 1.09
LSP1-217ENST00000612798 FAM182BQ5T319 152 aa21.84■■□□□ 1.09
LSP1-217ENST00000612798 DOT1LQ8TEK3 1739 aa21.84■■□□□ 1.09
LSP1-217ENST00000612798 C5P01031 1676 aa21.84■■□□□ 1.09
LSP1-217ENST00000612798 THSD7AQ9UPZ6 1657 aa21.84■■□□□ 1.09
LSP1-217ENST00000612798 IPO8O15397 1037 aaKnown RBP21.83■■□□□ 1.09
LSP1-217ENST00000612798 PTCD1O75127 700 aaKnown RBP21.83■■□□□ 1.09
LSP1-217ENST00000612798 B4GALNT3Q6L9W6 998 aa21.83■■□□□ 1.09
LSP1-217ENST00000612798 FTSJ3Q8IY81 847 aaKnown RBP21.83■■□□□ 1.09
LSP1-217ENST00000612798 STK31Q9BXU1 1019 aa21.83■■□□□ 1.09
LSP1-217ENST00000612798 PPP4R2Q9NY27 417 aa21.83■■□□□ 1.09
LSP1-217ENST00000612798 SOS1Q07889 1333 aaPredicted RBP21.83■■□□□ 1.08
LSP1-217ENST00000612798 HOXB7P09629 217 aa21.83■■□□□ 1.08
LSP1-217ENST00000612798 FMNL2Q96PY5 1086 aa21.83■■□□□ 1.08
LSP1-217ENST00000612798 CHPF2Q9P2E5 772 aa21.83■■□□□ 1.08
LSP1-217ENST00000612798 PAPPAQ13219 1627 aa21.82■■□□□ 1.08
LSP1-217ENST00000612798 TMEM57Q8N5G2 664 aa21.81■■□□□ 1.08
LSP1-217ENST00000612798 ATG3Q9NT62 314 aa21.81■■□□□ 1.08
LSP1-217ENST00000612798 USP16Q9Y5T5 823 aa21.81■■□□□ 1.08
LSP1-217ENST00000612798 BCL9O00512 1426 aa21.81■■□□□ 1.08
LSP1-217ENST00000612798 KCPQ6ZWJ8 1503 aa21.81■■□□□ 1.08
LSP1-217ENST00000612798 PHAXQ9H814 394 aaKnown RBP21.81■■□□□ 1.08
LSP1-217ENST00000612798 KCNQ2O43526 872 aa21.8■■□□□ 1.08
LSP1-217ENST00000612798 PROSER3Q2NL68 480 aa21.8■■□□□ 1.08
LSP1-217ENST00000612798 SEPT12Q8IYM1 358 aa21.8■■□□□ 1.08
LSP1-217ENST00000612798 ARHGAP45Q92619 1136 aa21.8■■□□□ 1.08
LSP1-217ENST00000612798 SNRPA1P09661 255 aaKnown RBP21.79■■□□□ 1.08
LSP1-217ENST00000612798 ONECUT3O60422 494 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms