RNA–Protein interactions for RNA: ENST00000611899.4

PDE1B-209, Transcript of phosphodiesterase 1B, humanhuman

TSL 4

Gene PDE1B, Length 628 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-209ENST00000611899 ADCY9O60503 1353 aa28.95■■■□□ 2.22
PDE1B-209ENST00000611899 MAP2P11137 1827 aaKnown RBP28.94■■■□□ 2.22
PDE1B-209ENST00000611899 PLEKHG2Q9H7P9 1386 aa28.93■■■□□ 2.22
PDE1B-209ENST00000611899 MMP10P09238 476 aa28.92■■■□□ 2.22
PDE1B-209ENST00000611899 RTCBQ9Y3I0 505 aaKnown RBP28.91■■■□□ 2.22
PDE1B-209ENST00000611899 ERVV-2B6SEH9 535 aa28.9■■■□□ 2.22
PDE1B-209ENST00000611899 HSP90AB1P08238 724 aaKnown RBP28.9■■■□□ 2.22
PDE1B-209ENST00000611899 RBM42Q9BTD8 480 aaKnown RBP28.9■■■□□ 2.22
PDE1B-209ENST00000611899 KDRP35968 1356 aa28.89■■■□□ 2.22
PDE1B-209ENST00000611899 TRAPPC3LQ5T215 181 aa28.89■■■□□ 2.22
PDE1B-209ENST00000611899 DCAF5Q96JK2 942 aa28.89■■■□□ 2.22
PDE1B-209ENST00000611899 PLEKHO1Q53GL0 409 aaPredicted RBP28.88■■■□□ 2.21
PDE1B-209ENST00000611899 NLGN1Q8N2Q7 840 aa28.86■■■□□ 2.21
PDE1B-209ENST00000611899 SLC4A9Q96Q91 983 aa28.86■■■□□ 2.21
PDE1B-209ENST00000611899 CLSPNQ9HAW4 1339 aa28.86■■■□□ 2.21
PDE1B-209ENST00000611899 ZNF530Q6P9A1 599 aaPredicted RBP28.85■■■□□ 2.21
PDE1B-209ENST00000611899 PANK3Q9H999 370 aa28.85■■■□□ 2.21
PDE1B-209ENST00000611899 CABP4P57796 275 aa28.84■■■□□ 2.21
PDE1B-209ENST00000611899 ADRA2BP18089 450 aa28.83■■■□□ 2.21
PDE1B-209ENST00000611899 EIF4G2P78344 907 aaKnown RBP eCLIP28.83■■■□□ 2.21
PDE1B-209ENST00000611899 AMOTQ4VCS5 1084 aa28.83■■■□□ 2.21
PDE1B-209ENST00000611899 RC3H1Q5TC82 1133 aaKnown RBP28.83■■■□□ 2.21
PDE1B-209ENST00000611899 ARHGEF1Q92888 912 aaKnown RBP28.83■■■□□ 2.21
PDE1B-209ENST00000611899 PCGF6Q9BYE7 350 aa28.83■■■□□ 2.21
PDE1B-209ENST00000611899 PXDNLA1KZ92 1463 aa28.83■■■□□ 2.21
PDE1B-209ENST00000611899 TGFB2P61812 414 aa28.82■■■□□ 2.2
PDE1B-209ENST00000611899 CNTNAP4Q9C0A0 1308 aa28.82■■■□□ 2.2
PDE1B-209ENST00000611899 CEP350Q5VT06 3117 aa28.81■■■□□ 2.2
PDE1B-209ENST00000611899 RFC4P35249 363 aa28.81■■■□□ 2.2
PDE1B-209ENST00000611899 KDM6AO15550 1401 aaPredicted RBP28.8■■■□□ 2.2
PDE1B-209ENST00000611899 RPS6KA4O75676 772 aa28.8■■■□□ 2.2
PDE1B-209ENST00000611899 HSPA6P17066 643 aa28.8■■■□□ 2.2
PDE1B-209ENST00000611899 BCS1LQ9Y276 419 aa28.8■■■□□ 2.2
PDE1B-209ENST00000611899 CICQ96RK0 1608 aaPredicted RBP28.8■■■□□ 2.2
PDE1B-209ENST00000611899 A0A0G2JLW4 131 aa28.79■■■□□ 2.2
PDE1B-209ENST00000611899 HSPA5P11021 654 aaKnown RBP28.79■■■□□ 2.2
PDE1B-209ENST00000611899 MTHFSP49914 203 aa28.79■■■□□ 2.2
PDE1B-209ENST00000611899 C1orf141Q5JVX7 400 aa28.79■■■□□ 2.2
PDE1B-209ENST00000611899 CCDC87Q9NVE4 849 aa28.79■■■□□ 2.2
PDE1B-209ENST00000611899 GYS1P13807 737 aa28.78■■■□□ 2.2
PDE1B-209ENST00000611899 MORC1Q86VD1 984 aa28.78■■■□□ 2.2
PDE1B-209ENST00000611899 C10orf71Q711Q0 1435 aa28.77■■■□□ 2.2
PDE1B-209ENST00000611899 PTCD1O75127 700 aaKnown RBP28.77■■■□□ 2.2
PDE1B-209ENST00000611899 AEBP1Q8IUX7 1158 aa28.77■■■□□ 2.2
PDE1B-209ENST00000611899 PARP3Q9Y6F1 533 aa28.77■■■□□ 2.2
PDE1B-209ENST00000611899 ZNF831Q5JPB2 1677 aa28.74■■■□□ 2.19
PDE1B-209ENST00000611899 KIF3CO14782 793 aa28.74■■■□□ 2.19
PDE1B-209ENST00000611899 DPEP1P16444 411 aa28.73■■■□□ 2.19
PDE1B-209ENST00000611899 ARHGAP27Q6ZUM4 889 aa28.73■■■□□ 2.19
PDE1B-209ENST00000611899 NFATC2IPQ8NCF5 419 aa28.73■■■□□ 2.19
PDE1B-209ENST00000611899 FCHSD2O94868 740 aa28.72■■■□□ 2.19
PDE1B-209ENST00000611899 CRKLP46109 303 aaKnown RBP28.72■■■□□ 2.19
PDE1B-209ENST00000611899 SULT6B1Q6IMI4 303 aa28.72■■■□□ 2.19
PDE1B-209ENST00000611899 IFFO2Q5TF58 517 aa28.71■■■□□ 2.19
PDE1B-209ENST00000611899 COL5A3P25940 1745 aaPredicted RBP28.69■■■□□ 2.18
PDE1B-209ENST00000611899 KIF13BQ9NQT8 1826 aa28.69■■■□□ 2.18
PDE1B-209ENST00000611899 KNSTRNQ9Y448 316 aa28.69■■■□□ 2.18
PDE1B-209ENST00000611899 C4AP0C0L4 1744 aa28.69■■■□□ 2.18
PDE1B-209ENST00000611899 KIAA1551Q9HCM1 1747 aa28.68■■■□□ 2.18
PDE1B-209ENST00000611899 SRP68Q9UHB9 627 aaKnown RBP28.67■■■□□ 2.18
PDE1B-209ENST00000611899 N4BP2Q86UW6 1770 aaPredicted RBP28.66■■■□□ 2.18
PDE1B-209ENST00000611899 IL13P35225 146 aa28.66■■■□□ 2.18
PDE1B-209ENST00000611899 USP42Q9H9J4 1324 aaKnown RBP28.66■■■□□ 2.18
PDE1B-209ENST00000611899 FKBP8Q14318 412 aa28.64■■■□□ 2.18
PDE1B-209ENST00000611899 PIM2Q9P1W9 311 aa28.64■■■□□ 2.18
PDE1B-209ENST00000611899 KCNA3P22001 575 aa28.63■■■□□ 2.17
PDE1B-209ENST00000611899 TOMM70O94826 608 aa28.62■■■□□ 2.17
PDE1B-209ENST00000611899 AKAP4Q5JQC9 854 aa28.62■■■□□ 2.17
PDE1B-209ENST00000611899 DDR1Q08345 913 aa28.61■■■□□ 2.17
PDE1B-209ENST00000611899 DALRD3Q5D0E6 543 aaKnown RBP28.6■■■□□ 2.17
PDE1B-209ENST00000611899 C9orf131Q5VYM1 1079 aa28.6■■■□□ 2.17
PDE1B-209ENST00000611899 INTS5Q6P9B9 1019 aaKnown RBP28.6■■■□□ 2.17
PDE1B-209ENST00000611899 APLP1P51693 650 aa28.59■■■□□ 2.17
PDE1B-209ENST00000611899 SLC52A2Q9HAB3 445 aa28.59■■■□□ 2.17
PDE1B-209ENST00000611899 NMRK2Q9NPI5 230 aa28.59■■■□□ 2.17
PDE1B-209ENST00000611899 MYH14Q7Z406 1995 aaKnown RBP28.59■■■□□ 2.17
PDE1B-209ENST00000611899 DNAJC10Q8IXB1 793 aa28.58■■■□□ 2.17
PDE1B-209ENST00000611899 ZPR1O75312 459 aa28.57■■■□□ 2.16
PDE1B-209ENST00000611899 LGR6Q9HBX8 967 aa28.56■■■□□ 2.16
PDE1B-209ENST00000611899 TJP1Q07157 1748 aa28.55■■■□□ 2.16
PDE1B-209ENST00000611899 POLRMTO00411 1230 aaKnown RBP28.55■■■□□ 2.16
PDE1B-209ENST00000611899 CHRNA5P30532 468 aa28.55■■■□□ 2.16
PDE1B-209ENST00000611899 AMER1Q5JTC6 1135 aaPredicted RBP28.55■■■□□ 2.16
PDE1B-209ENST00000611899 USPL1Q5W0Q7 1092 aa28.55■■■□□ 2.16
PDE1B-209ENST00000611899 HMOX1P09601 288 aa28.54■■■□□ 2.16
PDE1B-209ENST00000611899 TM4SF1P30408 202 aa28.54■■■□□ 2.16
PDE1B-209ENST00000611899 CCER1Q8TC90 406 aaPredicted RBP28.54■■■□□ 2.16
PDE1B-209ENST00000611899 SOS1Q07889 1333 aaPredicted RBP28.53■■■□□ 2.16
PDE1B-209ENST00000611899 RNMTO43148 476 aaKnown RBP28.53■■■□□ 2.16
PDE1B-209ENST00000611899 SLC39A6Q13433 755 aa28.53■■■□□ 2.16
PDE1B-209ENST00000611899 C16orf71Q8IYS4 520 aaPredicted RBP28.53■■■□□ 2.16
PDE1B-209ENST00000611899 CYP19A1P11511 503 aaPredicted RBP28.52■■■□□ 2.16
PDE1B-209ENST00000611899 RNF181Q9P0P0 153 aa28.52■■■□□ 2.16
PDE1B-209ENST00000611899 BRCA1P38398 1863 aaKnown RBP28.51■■■□□ 2.15
PDE1B-209ENST00000611899 SCN11AQ9UI33 1791 aa28.5■■■□□ 2.15
PDE1B-209ENST00000611899 KDM2BQ8NHM5 1336 aa28.49■■■□□ 2.15
PDE1B-209ENST00000611899 MRC1P22897 1456 aa28.49■■■□□ 2.15
PDE1B-209ENST00000611899 RBM46Q8TBY0 533 aaKnown RBP28.49■■■□□ 2.15
PDE1B-209ENST00000611899 NARFQ9UHQ1 456 aa28.48■■■□□ 2.15
PDE1B-209ENST00000611899 COL15A1P39059 1388 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms