RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 CCDC27Q2M243 656 aa9.75□□□□□ -0.85
CBWD1-219ENST00000611457 PLEKHO1Q53GL0 409 aaPredicted RBP9.75□□□□□ -0.85
CBWD1-219ENST00000611457 PNNQ9H307 717 aaKnown RBP9.75□□□□□ -0.85
CBWD1-219ENST00000611457 MYBBP1AQ9BQG0 1328 aaKnown RBP9.74□□□□□ -0.85
CBWD1-219ENST00000611457 GGNBP2Q9H3C7 697 aa9.74□□□□□ -0.85
CBWD1-219ENST00000611457 PDZRN3Q9UPQ7 1066 aa9.74□□□□□ -0.85
CBWD1-219ENST00000611457 PALLDQ8WX93 1383 aa9.74□□□□□ -0.85
CBWD1-219ENST00000611457 PPP2R1AP30153 589 aa9.74□□□□□ -0.85
CBWD1-219ENST00000611457 AMPHP49418 695 aa9.74□□□□□ -0.85
CBWD1-219ENST00000611457 PTGER2P43116 358 aa9.74□□□□□ -0.85
CBWD1-219ENST00000611457 HSP90AB2PQ58FF8 381 aa9.74□□□□□ -0.85
CBWD1-219ENST00000611457 EMILIN1Q9Y6C2 1016 aa9.74□□□□□ -0.85
CBWD1-219ENST00000611457 RNF123Q5XPI4 1314 aa9.73□□□□□ -0.85
CBWD1-219ENST00000611457 TMC1Q8TDI8 760 aa9.73□□□□□ -0.85
CBWD1-219ENST00000611457 HOXB7P09629 217 aa9.72□□□□□ -0.85
CBWD1-219ENST00000611457 SF3B2Q13435 895 aaKnown RBP9.72□□□□□ -0.85
CBWD1-219ENST00000611457 SLC15A2Q16348 729 aa9.72□□□□□ -0.85
CBWD1-219ENST00000611457 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.72□□□□□ -0.85
CBWD1-219ENST00000611457 GAS2L2Q8NHY3 880 aa9.72□□□□□ -0.85
CBWD1-219ENST00000611457 SCN4AP35499 1836 aa9.72□□□□□ -0.85
CBWD1-219ENST00000611457 NBPF14Q5TI25 921 aa9.72□□□□□ -0.85
CBWD1-219ENST00000611457 IL16Q14005 1332 aa9.72□□□□□ -0.85
CBWD1-219ENST00000611457 PNPLA7Q6ZV29 1317 aa9.72□□□□□ -0.85
CBWD1-219ENST00000611457 ECM29Q5VYK3 1845 aa9.71□□□□□ -0.85
CBWD1-219ENST00000611457 TXNRD1Q16881 649 aa9.71□□□□□ -0.85
CBWD1-219ENST00000611457 MORC1Q86VD1 984 aa9.71□□□□□ -0.85
CBWD1-219ENST00000611457 MTFR1LQ9H019 292 aa9.71□□□□□ -0.85
CBWD1-219ENST00000611457 RAPGEF4Q8WZA2 1011 aa9.71□□□□□ -0.86
CBWD1-219ENST00000611457 PNISRQ8TF01 805 aaKnown RBP9.71□□□□□ -0.86
CBWD1-219ENST00000611457 ZC3H4Q9UPT8 1303 aaKnown RBP9.7□□□□□ -0.86
CBWD1-219ENST00000611457 DIAPH1O60610 1272 aaKnown RBP9.7□□□□□ -0.86
CBWD1-219ENST00000611457 TEX13AQ9BXU3 409 aaPredicted RBP9.7□□□□□ -0.86
CBWD1-219ENST00000611457 KCNQ2O43526 872 aa9.69□□□□□ -0.86
CBWD1-219ENST00000611457 SLC52A2Q9HAB3 445 aa9.69□□□□□ -0.86
CBWD1-219ENST00000611457 COL15A1P39059 1388 aa9.69□□□□□ -0.86
CBWD1-219ENST00000611457 RNMTO43148 476 aaKnown RBP9.68□□□□□ -0.86
CBWD1-219ENST00000611457 EZH2Q15910 746 aaKnown RBP9.68□□□□□ -0.86
CBWD1-219ENST00000611457 KAT6BQ8WYB5 2073 aa9.68□□□□□ -0.86
CBWD1-219ENST00000611457 RRS1Q15050 365 aaKnown RBP9.68□□□□□ -0.86
CBWD1-219ENST00000611457 STRN4Q9NRL3 753 aa9.68□□□□□ -0.86
CBWD1-219ENST00000611457 CFAP53Q96M91 514 aa9.67□□□□□ -0.86
CBWD1-219ENST00000611457 ATG3Q9NT62 314 aa9.67□□□□□ -0.86
CBWD1-219ENST00000611457 CD2APQ9Y5K6 639 aa9.67□□□□□ -0.86
CBWD1-219ENST00000611457 KLRG2A4D1S0 409 aaPredicted RBP9.67□□□□□ -0.86
CBWD1-219ENST00000611457 NLRP2Q9NX02 1062 aa9.67□□□□□ -0.86
CBWD1-219ENST00000611457 PAPPA2Q9BXP8 1791 aa9.67□□□□□ -0.86
CBWD1-219ENST00000611457 COL4A1P02462 1669 aa9.66□□□□□ -0.86
CBWD1-219ENST00000611457 NUTM2GQ5VZR2 741 aa9.66□□□□□ -0.86
CBWD1-219ENST00000611457 LRRC4BQ9NT99 713 aa9.66□□□□□ -0.86
CBWD1-219ENST00000611457 APBA3O96018 575 aa9.66□□□□□ -0.86
CBWD1-219ENST00000611457 ZNF853P0CG23 659 aa9.66□□□□□ -0.86
CBWD1-219ENST00000611457 PIGBQ92521 554 aa9.66□□□□□ -0.86
CBWD1-219ENST00000611457 STK32BQ9NY57 414 aa9.66□□□□□ -0.86
CBWD1-219ENST00000611457 RPS6KA4O75676 772 aa9.65□□□□□ -0.86
CBWD1-219ENST00000611457 TRIM37O94972 964 aa9.65□□□□□ -0.86
CBWD1-219ENST00000611457 MTHFSP49914 203 aa9.65□□□□□ -0.86
CBWD1-219ENST00000611457 LTBP3Q9NS15 1303 aa9.65□□□□□ -0.87
CBWD1-219ENST00000611457 ANO8Q9HCE9 1232 aaPredicted RBP9.64□□□□□ -0.87
CBWD1-219ENST00000611457 A0A087WZG4 1122 aa9.64□□□□□ -0.87
CBWD1-219ENST00000611457 ZNF316A6NFI3 1004 aaPredicted RBP9.64□□□□□ -0.87
CBWD1-219ENST00000611457 ZNF827Q17R98 1081 aa9.64□□□□□ -0.87
CBWD1-219ENST00000611457 SENP3Q9H4L4 574 aaPredicted RBP9.64□□□□□ -0.87
CBWD1-219ENST00000611457 LMOD3Q0VAK6 560 aa9.63□□□□□ -0.87
CBWD1-219ENST00000611457 LRP10Q7Z4F1 713 aa9.63□□□□□ -0.87
CBWD1-219ENST00000611457 NUDCQ9Y266 331 aa9.63□□□□□ -0.87
CBWD1-219ENST00000611457 CSB-PGBD3P0DP91 1061 aa9.62□□□□□ -0.87
CBWD1-219ENST00000611457 EN1Q05925 392 aaPredicted RBP9.62□□□□□ -0.87
CBWD1-219ENST00000611457 TAF1P21675 1872 aa9.62□□□□□ -0.87
CBWD1-219ENST00000611457 TM4SF1P30408 202 aa9.62□□□□□ -0.87
CBWD1-219ENST00000611457 GNAT3A8MTJ3 354 aa9.62□□□□□ -0.87
CBWD1-219ENST00000611457 NFE2L2Q16236 605 aa9.62□□□□□ -0.87
CBWD1-219ENST00000611457 INTS5Q6P9B9 1019 aaKnown RBP9.62□□□□□ -0.87
CBWD1-219ENST00000611457 ZNF521Q96K83 1311 aa9.62□□□□□ -0.87
CBWD1-219ENST00000611457 USP42Q9H9J4 1324 aaKnown RBP9.62□□□□□ -0.87
CBWD1-219ENST00000611457 CACNA1SQ13698 1873 aa9.61□□□□□ -0.87
CBWD1-219ENST00000611457 GRIPAP1Q4V328 841 aa9.61□□□□□ -0.87
CBWD1-219ENST00000611457 CLEC4GQ6UXB4 293 aa9.61□□□□□ -0.87
CBWD1-219ENST00000611457 SLC4A9Q96Q91 983 aa9.61□□□□□ -0.87
CBWD1-219ENST00000611457 LOC102724428A0A0B4J2F2 783 aa9.61□□□□□ -0.87
CBWD1-219ENST00000611457 SIK1P57059 783 aa9.61□□□□□ -0.87
CBWD1-219ENST00000611457 TGFB2P61812 414 aa9.61□□□□□ -0.87
CBWD1-219ENST00000611457 BCL11AQ9H165 835 aa9.61□□□□□ -0.87
CBWD1-219ENST00000611457 PRKRIP1Q9H875 184 aaPredicted RBP9.61□□□□□ -0.87
CBWD1-219ENST00000611457 SPON1Q9HCB6 807 aa9.61□□□□□ -0.87
CBWD1-219ENST00000611457 RTL9Q8NET4 1388 aa9.61□□□□□ -0.87
CBWD1-219ENST00000611457 CYP19A1P11511 503 aaPredicted RBP9.61□□□□□ -0.87
CBWD1-219ENST00000611457 MTHFSDQ2M296 383 aaKnown RBP9.61□□□□□ -0.87
CBWD1-219ENST00000611457 LINC00116Q8NCU8 138 aa9.61□□□□□ -0.87
CBWD1-219ENST00000611457 CHMP4AQ9BY43 222 aa9.61□□□□□ -0.87
CBWD1-219ENST00000611457 ERVV-1B6SEH8 477 aa9.6□□□□□ -0.87
CBWD1-219ENST00000611457 IL6STP40189 918 aaPredicted RBP9.6□□□□□ -0.87
CBWD1-219ENST00000611457 TMOD3Q9NYL9 352 aa9.6□□□□□ -0.87
CBWD1-219ENST00000611457 CCDC88AQ3V6T2 1871 aa9.6□□□□□ -0.87
CBWD1-219ENST00000611457 VPS33BQ9H267 617 aa9.59□□□□□ -0.87
CBWD1-219ENST00000611457 EIF5P55010 431 aaKnown RBP9.59□□□□□ -0.87
CBWD1-219ENST00000611457 DEFB132Q7Z7B7 95 aa9.59□□□□□ -0.87
CBWD1-219ENST00000611457 PRIM1P49642 420 aaKnown RBP9.59□□□□□ -0.87
CBWD1-219ENST00000611457 BRPF1P55201 1214 aaPredicted RBP9.58□□□□□ -0.88
CBWD1-219ENST00000611457 ITPK1Q13572 414 aa9.58□□□□□ -0.88
CBWD1-219ENST00000611457 CCDC9Q9Y3X0 531 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms