RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 C10orf71Q711Q0 1435 aa16.48■□□□□ 0.23
FDPS-220ENST00000611010 ASAP1Q9ULH1 1129 aa16.48■□□□□ 0.23
FDPS-220ENST00000611010 KIF3CO14782 793 aa16.47■□□□□ 0.23
FDPS-220ENST00000611010 HSPA6P17066 643 aa16.47■□□□□ 0.23
FDPS-220ENST00000611010 EYA1Q99502 592 aa16.47■□□□□ 0.23
FDPS-220ENST00000611010 SLC24A1O60721 1099 aa16.46■□□□□ 0.23
FDPS-220ENST00000611010 SLC4A9Q96Q91 983 aa16.46■□□□□ 0.23
FDPS-220ENST00000611010 VIRMAQ69YN4 1812 aaKnown RBP16.46■□□□□ 0.23
FDPS-220ENST00000611010 WASHC2AQ641Q2 1341 aa16.45■□□□□ 0.22
FDPS-220ENST00000611010 KDM6AO15550 1401 aaPredicted RBP16.45■□□□□ 0.22
FDPS-220ENST00000611010 WDR90Q96KV7 1748 aa16.45■□□□□ 0.22
FDPS-220ENST00000611010 GNPATO15228 680 aa16.45■□□□□ 0.22
FDPS-220ENST00000611010 PHKG2P15735 406 aa16.45■□□□□ 0.22
FDPS-220ENST00000611010 ATG3Q9NT62 314 aa16.44■□□□□ 0.22
FDPS-220ENST00000611010 TMOD3Q9NYL9 352 aa16.43■□□□□ 0.22
FDPS-220ENST00000611010 POLKQ9UBT6 870 aa16.43■□□□□ 0.22
FDPS-220ENST00000611010 SPG7Q9UQ90 795 aa16.43■□□□□ 0.22
FDPS-220ENST00000611010 SCN11AQ9UI33 1791 aa16.43■□□□□ 0.22
FDPS-220ENST00000611010 PPM1GO15355 546 aaPredicted RBP16.42■□□□□ 0.22
FDPS-220ENST00000611010 MMP10P09238 476 aa16.42■□□□□ 0.22
FDPS-220ENST00000611010 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.42■□□□□ 0.226e-9■□□□□ 10.6
FDPS-220ENST00000611010 SBF1O95248 1867 aa16.42■□□□□ 0.22
FDPS-220ENST00000611010 ATP6V1AP38606 617 aa16.41■□□□□ 0.22
FDPS-220ENST00000611010 EIF4A2Q14240 407 aaKnown RBP16.41■□□□□ 0.22
FDPS-220ENST00000611010 PLEKHG2Q9H7P9 1386 aa16.4■□□□□ 0.22
FDPS-220ENST00000611010 IFNL2Q8IZJ0 200 aa16.39■□□□□ 0.21
FDPS-220ENST00000611010 DLEC1Q9Y238 1755 aa16.38■□□□□ 0.21
FDPS-220ENST00000611010 AFDNP55196 1824 aaKnown RBP16.38■□□□□ 0.21
FDPS-220ENST00000611010 HMGB2P26583 209 aaKnown RBP16.38■□□□□ 0.21
FDPS-220ENST00000611010 A0A0G2JLW4 131 aa16.37■□□□□ 0.21
FDPS-220ENST00000611010 GYS1P13807 737 aa16.37■□□□□ 0.21
FDPS-220ENST00000611010 CDCA8Q53HL2 280 aa16.37■□□□□ 0.21
FDPS-220ENST00000611010 CCER1Q8TC90 406 aaPredicted RBP16.37■□□□□ 0.21
FDPS-220ENST00000611010 TNRC6CQ9HCJ0 1690 aaKnown RBP16.37■□□□□ 0.21
FDPS-220ENST00000611010 CNTNAP4Q9C0A0 1308 aa16.36■□□□□ 0.21
FDPS-220ENST00000611010 NRXN2Q9P2S2 1712 aa16.36■□□□□ 0.21
FDPS-220ENST00000611010 DPEP1P16444 411 aa16.35■□□□□ 0.21
FDPS-220ENST00000611010 KCNA3P22001 575 aa16.35■□□□□ 0.21
FDPS-220ENST00000611010 ARHGEF1Q92888 912 aaKnown RBP16.35■□□□□ 0.21
FDPS-220ENST00000611010 NMRK2Q9NPI5 230 aa16.35■□□□□ 0.21
FDPS-220ENST00000611010 BCS1LQ9Y276 419 aa16.35■□□□□ 0.21
FDPS-220ENST00000611010 TNNT2P45379 298 aaPredicted RBP16.34■□□□□ 0.21
FDPS-220ENST00000611010 RTCBQ9Y3I0 505 aaKnown RBP16.34■□□□□ 0.21
FDPS-220ENST00000611010 TIAM2Q8IVF5 1701 aa16.33■□□□□ 0.21
FDPS-220ENST00000611010 TGFB2P61812 414 aa16.33■□□□□ 0.2
FDPS-220ENST00000611010 DNAJC5GQ8N7S2 189 aa16.33■□□□□ 0.2
FDPS-220ENST00000611010 KCPQ6ZWJ8 1503 aa16.33■□□□□ 0.2
FDPS-220ENST00000611010 ERVV-2B6SEH9 535 aa16.32■□□□□ 0.2
FDPS-220ENST00000611010 MRC1P22897 1456 aa16.32■□□□□ 0.2
FDPS-220ENST00000611010 TRAPPC3LQ5T215 181 aa16.32■□□□□ 0.2
FDPS-220ENST00000611010 RC3H1Q5TC82 1133 aaKnown RBP16.32■□□□□ 0.2
FDPS-220ENST00000611010 AEBP1Q8IUX7 1158 aa16.32■□□□□ 0.2
FDPS-220ENST00000611010 UBR2Q8IWV8 1755 aa16.32■□□□□ 0.2
FDPS-220ENST00000611010 RBM42Q9BTD8 480 aaKnown RBP16.32■□□□□ 0.2
FDPS-220ENST00000611010 CCDC88AQ3V6T2 1871 aa16.31■□□□□ 0.2
FDPS-220ENST00000611010 RPS6KA4O75676 772 aa16.31■□□□□ 0.2
FDPS-220ENST00000611010 ADRA2BP18089 450 aa16.31■□□□□ 0.2
FDPS-220ENST00000611010 DDR1Q08345 913 aa16.31■□□□□ 0.2
FDPS-220ENST00000611010 NLGN1Q8N2Q7 840 aa16.31■□□□□ 0.2
FDPS-220ENST00000611010 SRP68Q9UHB9 627 aaKnown RBP16.31■□□□□ 0.2
FDPS-220ENST00000611010 DCAF5Q96JK2 942 aa16.3■□□□□ 0.2
FDPS-220ENST00000611010 USP42Q9H9J4 1324 aaKnown RBP16.29■□□□□ 0.2
FDPS-220ENST00000611010 TOMM70O94826 608 aa16.29■□□□□ 0.2
FDPS-220ENST00000611010 ZNF530Q6P9A1 599 aaPredicted RBP16.29■□□□□ 0.2
FDPS-220ENST00000611010 CCDC87Q9NVE4 849 aa16.29■□□□□ 0.2
FDPS-220ENST00000611010 PCNTO95613 3336 aa16.29■□□□□ 0.2
FDPS-220ENST00000611010 ANKRD31Q8N7Z5 1873 aa16.29■□□□□ 0.2
FDPS-220ENST00000611010 COL11A2P13942 1736 aaPredicted RBP16.28■□□□□ 0.2
FDPS-220ENST00000611010 FCHSD2O94868 740 aa16.28■□□□□ 0.2
FDPS-220ENST00000611010 CRKLP46109 303 aaKnown RBP16.28■□□□□ 0.2
FDPS-220ENST00000611010 APLP1P51693 650 aa16.28■□□□□ 0.2
FDPS-220ENST00000611010 HTRA3P83110 453 aa16.28■□□□□ 0.2
FDPS-220ENST00000611010 FKBP8Q14318 412 aa16.28■□□□□ 0.2
FDPS-220ENST00000611010 ARHGAP27Q6ZUM4 889 aa16.28■□□□□ 0.2
FDPS-220ENST00000611010 C9orf131Q5VYM1 1079 aa16.27■□□□□ 0.2
FDPS-220ENST00000611010 PTCD1O75127 700 aaKnown RBP16.26■□□□□ 0.19
FDPS-220ENST00000611010 RFC4P35249 363 aa16.26■□□□□ 0.19
FDPS-220ENST00000611010 PARP3Q9Y6F1 533 aa16.26■□□□□ 0.19
FDPS-220ENST00000611010 SCN7AQ01118 1682 aa16.26■□□□□ 0.19
FDPS-220ENST00000611010 CHRNA5P30532 468 aa16.25■□□□□ 0.19
FDPS-220ENST00000611010 SIPA1L3O60292 1781 aaPredicted RBP16.25■□□□□ 0.19
FDPS-220ENST00000611010 POLRMTO00411 1230 aaKnown RBP16.24■□□□□ 0.19
FDPS-220ENST00000611010 HSP90AB1P08238 724 aaKnown RBP16.24■□□□□ 0.19
FDPS-220ENST00000611010 CABP4P57796 275 aa16.24■□□□□ 0.19
FDPS-220ENST00000611010 PLEKHO1Q53GL0 409 aaPredicted RBP16.24■□□□□ 0.19
FDPS-220ENST00000611010 INTS5Q6P9B9 1019 aaKnown RBP16.24■□□□□ 0.19
FDPS-220ENST00000611010 POLR3GLQ9BT43 218 aa16.24■□□□□ 0.19
FDPS-220ENST00000611010 CACNA1SQ13698 1873 aa16.23■□□□□ 0.19
FDPS-220ENST00000611010 PRELPP51888 382 aa16.23■□□□□ 0.19
FDPS-220ENST00000611010 NFATC2IPQ8NCF5 419 aa16.23■□□□□ 0.19
FDPS-220ENST00000611010 RBM46Q8TBY0 533 aaKnown RBP16.23■□□□□ 0.19
FDPS-220ENST00000611010 DICER1Q9UPY3 1922 aaKnown RBP16.22■□□□□ 0.19
FDPS-220ENST00000611010 AMOTQ4VCS5 1084 aa16.22■□□□□ 0.19
FDPS-220ENST00000611010 PANK3Q9H999 370 aa16.22■□□□□ 0.19
FDPS-220ENST00000611010 PIM2Q9P1W9 311 aa16.22■□□□□ 0.19
FDPS-220ENST00000611010 CARMIL3Q8ND23 1372 aa16.22■□□□□ 0.19
FDPS-220ENST00000611010 SOS1Q07889 1333 aaPredicted RBP16.21■□□□□ 0.19
FDPS-220ENST00000611010 TM4SF1P30408 202 aa16.21■□□□□ 0.19
FDPS-220ENST00000611010 MTHFSP49914 203 aa16.21■□□□□ 0.19
FDPS-220ENST00000611010 RASSF7Q02833 373 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms