RNA–Protein interactions for RNA: ENST00000608431.1

LINC00649-213, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 260 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-213ENST00000608431 SPRYD3Q8NCJ5 442 aa8.37□□□□□ -1.07
LINC00649-213ENST00000608431 ZFP91Q96JP5 570 aaPredicted RBP8.37□□□□□ -1.07
LINC00649-213ENST00000608431 CCDC88AQ3V6T2 1871 aa8.36□□□□□ -1.07
LINC00649-213ENST00000608431 UBR3Q6ZT12 1888 aa8.36□□□□□ -1.07
LINC00649-213ENST00000608431 STK25O00506 426 aa8.36□□□□□ -1.07
LINC00649-213ENST00000608431 CFAP70Q5T0N1 1121 aa8.36□□□□□ -1.07
LINC00649-213ENST00000608431 ARHGAP27Q6ZUM4 889 aa8.36□□□□□ -1.07
LINC00649-213ENST00000608431 RRAGCQ9HB90 399 aa8.36□□□□□ -1.07
LINC00649-213ENST00000608431 CUL9Q8IWT3 2517 aa8.35□□□□□ -1.07
LINC00649-213ENST00000608431 CCDC85CA6NKD9 419 aa8.35□□□□□ -1.07
LINC00649-213ENST00000608431 CCER1Q8TC90 406 aaPredicted RBP8.35□□□□□ -1.07
LINC00649-213ENST00000608431 TAOK2Q9UL54 1235 aa8.35□□□□□ -1.07
LINC00649-213ENST00000608431 PCDHB8Q9UN66 801 aa8.35□□□□□ -1.07
LINC00649-213ENST00000608431 PCDHB13Q9Y5F0 798 aa8.35□□□□□ -1.07
LINC00649-213ENST00000608431 CPSF1Q10570 1443 aaKnown RBP8.35□□□□□ -1.07
LINC00649-213ENST00000608431 A0A0C4DFX4 3053 aa8.34□□□□□ -1.07
LINC00649-213ENST00000608431 C9orf131Q5VYM1 1079 aa8.34□□□□□ -1.07
LINC00649-213ENST00000608431 CCNL1Q9UK58 526 aaPredicted RBP8.34□□□□□ -1.07
LINC00649-213ENST00000608431 KDM2AQ9Y2K7 1162 aa8.34□□□□□ -1.07
LINC00649-213ENST00000608431 AXIN2Q9Y2T1 843 aa8.34□□□□□ -1.07
LINC00649-213ENST00000608431 ADGRB1O14514 1584 aa8.34□□□□□ -1.07
LINC00649-213ENST00000608431 PLEKHG3A1L390 1219 aa8.33□□□□□ -1.08
LINC00649-213ENST00000608431 ITGAEP38570 1179 aa8.33□□□□□ -1.08
LINC00649-213ENST00000608431 KCNQ4P56696 695 aa8.33□□□□□ -1.08
LINC00649-213ENST00000608431 NLRP6P59044 892 aa8.33□□□□□ -1.08
LINC00649-213ENST00000608431 KIF12Q96FN5 646 aa8.33□□□□□ -1.08
LINC00649-213ENST00000608431 TSHZ2Q9NRE2 1034 aa8.33□□□□□ -1.08
LINC00649-213ENST00000608431 TRAK1Q9UPV9 953 aa8.33□□□□□ -1.08
LINC00649-213ENST00000608431 BCS1LQ9Y276 419 aa8.33□□□□□ -1.08
LINC00649-213ENST00000608431 NSD3Q9BZ95 1437 aa8.32□□□□□ -1.08
LINC00649-213ENST00000608431 GTPBP6O43824 516 aaPredicted RBP8.32□□□□□ -1.08
LINC00649-213ENST00000608431 IL2RBP14784 551 aa8.32□□□□□ -1.08
LINC00649-213ENST00000608431 VEGFAP15692 232 aaPredicted RBP8.32□□□□□ -1.08
LINC00649-213ENST00000608431 LBX1P52954 281 aa8.32□□□□□ -1.08
LINC00649-213ENST00000608431 ZNF467Q7Z7K2 595 aaPredicted RBP8.32□□□□□ -1.08
LINC00649-213ENST00000608431 C4BP0C0L5 1744 aa8.32□□□□□ -1.08
LINC00649-213ENST00000608431 ZC3H4Q9UPT8 1303 aaKnown RBP8.31□□□□□ -1.08
LINC00649-213ENST00000608431 LTN1O94822 1766 aa8.31□□□□□ -1.08
LINC00649-213ENST00000608431 TGFB2P61812 414 aa8.31□□□□□ -1.08
LINC00649-213ENST00000608431 VSIG10Q8N0Z9 540 aa8.31□□□□□ -1.08
LINC00649-213ENST00000608431 SYTL4Q96C24 671 aaPredicted RBP8.31□□□□□ -1.08
LINC00649-213ENST00000608431 MKRN1Q9UHC7 482 aaKnown RBP8.31□□□□□ -1.08
LINC00649-213ENST00000608431 STK24Q9Y6E0 443 aa8.31□□□□□ -1.08
LINC00649-213ENST00000608431 ANKRD36BQ8N2N9 1353 aa8.31□□□□□ -1.08
LINC00649-213ENST00000608431 FAM208AQ9UK61 1670 aaKnown RBP8.3□□□□□ -1.08
LINC00649-213ENST00000608431 TIAM2Q8IVF5 1701 aa8.3□□□□□ -1.08
LINC00649-213ENST00000608431 TOGARAM1Q9Y4F4 1720 aa8.3□□□□□ -1.08
LINC00649-213ENST00000608431 MAP3K13O43283 966 aa8.3□□□□□ -1.08
LINC00649-213ENST00000608431 FCHSD2O94868 740 aa8.3□□□□□ -1.08
LINC00649-213ENST00000608431 CD44P16070 742 aaKnown RBP8.3□□□□□ -1.08
LINC00649-213ENST00000608431 ARHGEF25Q86VW2 580 aa8.3□□□□□ -1.08
LINC00649-213ENST00000608431 IFNL1Q8IU54 200 aa8.3□□□□□ -1.08
LINC00649-213ENST00000608431 ZNF579Q8NAF0 562 aaKnown RBP8.3□□□□□ -1.08
LINC00649-213ENST00000608431 KCNH5Q8NCM2 988 aa8.3□□□□□ -1.08
LINC00649-213ENST00000608431 RNF181Q9P0P0 153 aa8.3□□□□□ -1.08
LINC00649-213ENST00000608431 CNTNAP1P78357 1384 aa8.3□□□□□ -1.08
LINC00649-213ENST00000608431 PDAP1Q13442 181 aaKnown RBP8.29□□□□□ -1.08
LINC00649-213ENST00000608431 CDK19Q9BWU1 502 aa8.29□□□□□ -1.08
LINC00649-213ENST00000608431 WBP1LQ9NX94 342 aa8.29□□□□□ -1.08
LINC00649-213ENST00000608431 USP47Q96K76 1375 aa8.29□□□□□ -1.08
LINC00649-213ENST00000608431 DICER1Q9UPY3 1922 aaKnown RBP8.29□□□□□ -1.08
LINC00649-213ENST00000608431 ZNF316A6NFI3 1004 aaPredicted RBP8.28□□□□□ -1.08
LINC00649-213ENST00000608431 C19orf67A6NJJ6 358 aa8.28□□□□□ -1.08
LINC00649-213ENST00000608431 PRIM1P49642 420 aaKnown RBP8.28□□□□□ -1.08
LINC00649-213ENST00000608431 PRPF38BQ5VTL8 546 aaKnown RBP8.28□□□□□ -1.08
LINC00649-213ENST00000608431 PHF12Q96QT6 1004 aa8.28□□□□□ -1.08
LINC00649-213ENST00000608431 CASP8AP2Q9UKL3 1982 aa8.28□□□□□ -1.08
LINC00649-213ENST00000608431 CLSPNQ9HAW4 1339 aa8.28□□□□□ -1.08
LINC00649-213ENST00000608431 HSPA8P11142 646 aaKnown RBP8.27□□□□□ -1.09
LINC00649-213ENST00000608431 NLRP2Q9NX02 1062 aa8.27□□□□□ -1.09
LINC00649-213ENST00000608431 NSD2O96028 1365 aa8.26□□□□□ -1.09
LINC00649-213ENST00000608431 A0A0G2JLW4 131 aa8.26□□□□□ -1.09
LINC00649-213ENST00000608431 PSEN1P49768 467 aa8.26□□□□□ -1.09
LINC00649-213ENST00000608431 MAP2K1Q02750 393 aaPredicted RBP8.26□□□□□ -1.09
LINC00649-213ENST00000608431 DDX54Q8TDD1 881 aaKnown RBP8.26□□□□□ -1.09
LINC00649-213ENST00000608431 AK7Q96M32 723 aa8.26□□□□□ -1.09
LINC00649-213ENST00000608431 ITGB4P16144 1822 aa8.26□□□□□ -1.09
LINC00649-213ENST00000608431 NFAT5O94916 1531 aa8.25□□□□□ -1.09
LINC00649-213ENST00000608431 GLTPD2A6NH11 291 aa8.25□□□□□ -1.09
LINC00649-213ENST00000608431 C4AP0C0L4 1744 aa8.25□□□□□ -1.09
LINC00649-213ENST00000608431 ERBB3P21860 1342 aa8.25□□□□□ -1.09
LINC00649-213ENST00000608431 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.24□□□□□ -1.09
LINC00649-213ENST00000608431 SSFA2P28290 1259 aa8.24□□□□□ -1.09
LINC00649-213ENST00000608431 VEGFBP49765 207 aa8.24□□□□□ -1.09
LINC00649-213ENST00000608431 GCC1Q96CN9 775 aa8.24□□□□□ -1.09
LINC00649-213ENST00000608431 DALRD3Q5D0E6 543 aaKnown RBP8.23□□□□□ -1.09
LINC00649-213ENST00000608431 DCAF5Q96JK2 942 aa8.23□□□□□ -1.09
LINC00649-213ENST00000608431 BEGAINQ9BUH8 593 aa8.23□□□□□ -1.09
LINC00649-213ENST00000608431 CCDC87Q9NVE4 849 aa8.23□□□□□ -1.09
LINC00649-213ENST00000608431 PIM2Q9P1W9 311 aa8.23□□□□□ -1.09
LINC00649-213ENST00000608431 SCN4AP35499 1836 aa8.23□□□□□ -1.09
LINC00649-213ENST00000608431 PHF14O94880 888 aa8.22□□□□□ -1.09
LINC00649-213ENST00000608431 MMP10P09238 476 aa8.22□□□□□ -1.09
LINC00649-213ENST00000608431 DPEP1P16444 411 aa8.22□□□□□ -1.09
LINC00649-213ENST00000608431 THSD7BQ9C0I4 1608 aa8.21□□□□□ -1.09
LINC00649-213ENST00000608431 KDM6AO15550 1401 aaPredicted RBP8.21□□□□□ -1.09
LINC00649-213ENST00000608431 SOX12O15370 315 aa8.21□□□□□ -1.1
LINC00649-213ENST00000608431 SRPK2P78362 688 aaKnown RBP8.21□□□□□ -1.1
LINC00649-213ENST00000608431 DPY19L2Q6NUT2 758 aa8.21□□□□□ -1.1
LINC00649-213ENST00000608431 MAP2P11137 1827 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms