RNA–Protein interactions for RNA: ENST00000606102.1

HMGN2P28-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 28, humanhuman

BASIC

Gene HMGN2P28, Length 262 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P28-201ENST00000606102 SND1Q7KZF4 910 aaKnown RBP eCLIP5.86□□□□□ -1.47
HMGN2P28-201ENST00000606102 CYP2U1Q7Z449 544 aa5.86□□□□□ -1.47
HMGN2P28-201ENST00000606102 CCDC125Q86Z20 511 aa5.86□□□□□ -1.47
HMGN2P28-201ENST00000606102 GRIP2Q9C0E4 1043 aa5.86□□□□□ -1.47
HMGN2P28-201ENST00000606102 GPC1P35052 558 aa5.85□□□□□ -1.47
HMGN2P28-201ENST00000606102 POU4F2Q12837 409 aa5.85□□□□□ -1.47
HMGN2P28-201ENST00000606102 WHAMMQ8TF30 809 aa5.85□□□□□ -1.47
HMGN2P28-201ENST00000606102 CHIC2Q9UKJ5 165 aa5.85□□□□□ -1.47
HMGN2P28-201ENST00000606102 HRH3Q9Y5N1 445 aa5.85□□□□□ -1.47
HMGN2P28-201ENST00000606102 ERCC3P19447 782 aa5.84□□□□□ -1.47
HMGN2P28-201ENST00000606102 GAS6Q14393 721 aa5.84□□□□□ -1.47
HMGN2P28-201ENST00000606102 ZNF428Q96B54 188 aa5.84□□□□□ -1.47
HMGN2P28-201ENST00000606102 SPATA31C2B4DYI2 1134 aa5.83□□□□□ -1.48
HMGN2P28-201ENST00000606102 EIF4G2P78344 907 aaKnown RBP eCLIP5.83□□□□□ -1.48
HMGN2P28-201ENST00000606102 SV2AQ7L0J3 742 aa5.83□□□□□ -1.48
HMGN2P28-201ENST00000606102 ZNF592Q92610 1267 aa5.83□□□□□ -1.48
HMGN2P28-201ENST00000606102 GLMNQ92990 594 aa5.83□□□□□ -1.48
HMGN2P28-201ENST00000606102 ZNF837Q96EG3 531 aaPredicted RBP5.83□□□□□ -1.48
HMGN2P28-201ENST00000606102 BCL11AQ9H165 835 aa5.83□□□□□ -1.48
HMGN2P28-201ENST00000606102 PIK3CDO00329 1044 aa5.82□□□□□ -1.48
HMGN2P28-201ENST00000606102 GNRH1P01148 92 aa5.82□□□□□ -1.48
HMGN2P28-201ENST00000606102 THBS1P07996 1170 aa5.82□□□□□ -1.48
HMGN2P28-201ENST00000606102 DBN1Q16643 649 aa5.82□□□□□ -1.48
HMGN2P28-201ENST00000606102 SLC27A3Q5K4L6 730 aa5.82□□□□□ -1.48
HMGN2P28-201ENST00000606102 ZNF385CQ66K41 422 aaPredicted RBP5.82□□□□□ -1.48
HMGN2P28-201ENST00000606102 NBPF10Q6P3W6 841 aaKnown RBP5.82□□□□□ -1.48
HMGN2P28-201ENST00000606102 RNF135Q8IUD6 432 aa5.82□□□□□ -1.48
HMGN2P28-201ENST00000606102 NBPF15Q8N660 670 aa5.82□□□□□ -1.48
HMGN2P28-201ENST00000606102 CNKSR1Q969H4 720 aa5.82□□□□□ -1.48
HMGN2P28-201ENST00000606102 XAGE2Q96GT9 111 aa5.82□□□□□ -1.48
HMGN2P28-201ENST00000606102 NLRP3Q96P20 1036 aa5.82□□□□□ -1.48
HMGN2P28-201ENST00000606102 ESYT1Q9BSJ8 1104 aa5.82□□□□□ -1.48
HMGN2P28-201ENST00000606102 FHDC1Q9C0D6 1143 aaPredicted RBP5.82□□□□□ -1.48
HMGN2P28-201ENST00000606102 ETNK1Q9HBU6 452 aa5.82□□□□□ -1.48
HMGN2P28-201ENST00000606102 DOLKQ9UPQ8 538 aa5.82□□□□□ -1.48
HMGN2P28-201ENST00000606102 GPR25O00155 361 aa5.81□□□□□ -1.48
HMGN2P28-201ENST00000606102 CENPCQ03188 943 aa5.81□□□□□ -1.48
HMGN2P28-201ENST00000606102 OXLD1Q5BKU9 147 aa5.81□□□□□ -1.48
HMGN2P28-201ENST00000606102 WASLO00401 505 aaPredicted RBP5.8□□□□□ -1.48
HMGN2P28-201ENST00000606102 MYCP01106 439 aaPredicted RBP5.8□□□□□ -1.48
HMGN2P28-201ENST00000606102 SLURP2P0DP57 97 aa5.8□□□□□ -1.48
HMGN2P28-201ENST00000606102 GSK3AP49840 483 aa5.8□□□□□ -1.48
HMGN2P28-201ENST00000606102 SCNN1DP51172 638 aa5.8□□□□□ -1.48
HMGN2P28-201ENST00000606102 WASHC4Q2M389 1173 aa5.8□□□□□ -1.48
HMGN2P28-201ENST00000606102 SLFNL1Q499Z3 407 aa5.8□□□□□ -1.48
HMGN2P28-201ENST00000606102 TRIM22Q8IYM9 498 aa5.8□□□□□ -1.48
HMGN2P28-201ENST00000606102 TRIM52Q96A61 297 aa5.8□□□□□ -1.48
HMGN2P28-201ENST00000606102 GAS2L1Q99501 681 aaPredicted RBP5.8□□□□□ -1.48
HMGN2P28-201ENST00000606102 DYRK1BQ9Y463 629 aa5.8□□□□□ -1.48
HMGN2P28-201ENST00000606102 IVNS1ABPQ9Y6Y0 642 aa5.8□□□□□ -1.48
HMGN2P28-201ENST00000606102 FAM181BA6NEQ2 426 aa5.79□□□□□ -1.48
HMGN2P28-201ENST00000606102 PHKA2P46019 1235 aa5.79□□□□□ -1.48
HMGN2P28-201ENST00000606102 RIPOR1Q6ZS17 1223 aa5.79□□□□□ -1.48
HMGN2P28-201ENST00000606102 TAS1R3Q7RTX0 852 aa5.79□□□□□ -1.48
HMGN2P28-201ENST00000606102 PLPP7Q8NBV4 271 aa5.79□□□□□ -1.48
HMGN2P28-201ENST00000606102 POM121CA8CG34 1229 aa5.78□□□□□ -1.48
HMGN2P28-201ENST00000606102 ARHGEF15O94989 841 aa5.78□□□□□ -1.48
HMGN2P28-201ENST00000606102 ADAMTS2O95450 1211 aa5.78□□□□□ -1.48
HMGN2P28-201ENST00000606102 C4orf17Q53FE4 359 aa5.78□□□□□ -1.48
HMGN2P28-201ENST00000606102 ADAMTS19Q8TE59 1207 aa5.78□□□□□ -1.48
HMGN2P28-201ENST00000606102 GTPBP3Q969Y2 492 aaKnown RBP5.78□□□□□ -1.48
HMGN2P28-201ENST00000606102 ALG2Q9H553 416 aa5.78□□□□□ -1.48
HMGN2P28-201ENST00000606102 TIMMDC1Q9NPL8 285 aa5.78□□□□□ -1.48
HMGN2P28-201ENST00000606102 RBM47A0AV96 593 aaKnown RBP5.77□□□□□ -1.49
HMGN2P28-201ENST00000606102 USP4Q13107 963 aa5.77□□□□□ -1.49
HMGN2P28-201ENST00000606102 SEMA3FQ13275 785 aa5.77□□□□□ -1.49
HMGN2P28-201ENST00000606102 WDR44Q5JSH3 913 aa5.77□□□□□ -1.49
HMGN2P28-201ENST00000606102 LYPD4Q6UWN0 246 aa5.77□□□□□ -1.49
HMGN2P28-201ENST00000606102 ZSCAN10Q96SZ4 725 aaPredicted RBP5.77□□□□□ -1.49
HMGN2P28-201ENST00000606102 ESF1Q9H501 851 aaKnown RBP5.77□□□□□ -1.49
HMGN2P28-201ENST00000606102 TMEM229AB2RXF0 380 aa5.76□□□□□ -1.49
HMGN2P28-201ENST00000606102 NCLP19338 710 aaKnown RBP5.76□□□□□ -1.49
HMGN2P28-201ENST00000606102 GDF10P55107 478 aa5.76□□□□□ -1.49
HMGN2P28-201ENST00000606102 UBAP2LQ14157 1087 aaKnown RBP5.76□□□□□ -1.49
HMGN2P28-201ENST00000606102 SVOPQ8N4V2 548 aa5.76□□□□□ -1.49
HMGN2P28-201ENST00000606102 CCER1Q8TC90 406 aaPredicted RBP5.76□□□□□ -1.49
HMGN2P28-201ENST00000606102 VRTNQ9H8Y1 702 aa5.76□□□□□ -1.49
HMGN2P28-201ENST00000606102 GPAMQ9HCL2 828 aa5.76□□□□□ -1.49
HMGN2P28-201ENST00000606102 ADAMTS8Q9UP79 889 aa5.76□□□□□ -1.49
HMGN2P28-201ENST00000606102 GNEQ9Y223 722 aaKnown RBP5.76□□□□□ -1.49
HMGN2P28-201ENST00000606102 USP3Q9Y6I4 520 aa5.76□□□□□ -1.49
HMGN2P28-201ENST00000606102 F11P03951 625 aa5.75□□□□□ -1.49
HMGN2P28-201ENST00000606102 SOX11P35716 441 aa5.75□□□□□ -1.49
HMGN2P28-201ENST00000606102 SRSF11Q05519 484 aaKnown RBP5.75□□□□□ -1.49
HMGN2P28-201ENST00000606102 TLR1Q15399 786 aa5.75□□□□□ -1.49
HMGN2P28-201ENST00000606102 MAP7D1Q3KQU3 841 aa5.75□□□□□ -1.49
HMGN2P28-201ENST00000606102 ZNF295-AS1Q8N0V1 137 aa5.75□□□□□ -1.49
HMGN2P28-201ENST00000606102 GMCL1Q96IK5 515 aa5.75□□□□□ -1.49
HMGN2P28-201ENST00000606102 NUCKS1Q9H1E3 243 aaKnown RBP5.75□□□□□ -1.49
HMGN2P28-201ENST00000606102 PCDHGA11Q9Y5H2 935 aa5.75□□□□□ -1.49
HMGN2P28-201ENST00000606102 INHAP05111 366 aa5.74□□□□□ -1.49
HMGN2P28-201ENST00000606102 CELA2BP08218 269 aaPredicted RBP5.74□□□□□ -1.49
HMGN2P28-201ENST00000606102 MSX1P28360 303 aa5.74□□□□□ -1.49
HMGN2P28-201ENST00000606102 ESCO1Q5FWF5 840 aa5.74□□□□□ -1.49
HMGN2P28-201ENST00000606102 TMEM214Q6NUQ4 689 aaKnown RBP5.74□□□□□ -1.49
HMGN2P28-201ENST00000606102 PPARGC1BQ86YN6 1023 aaKnown RBP5.74□□□□□ -1.49
HMGN2P28-201ENST00000606102 FAM177A1Q8N128 213 aaPredicted RBP5.74□□□□□ -1.49
HMGN2P28-201ENST00000606102 UCN2Q96RP3 112 aa5.74□□□□□ -1.49
HMGN2P28-201ENST00000606102 RUBCNLQ9H714 662 aa5.74□□□□□ -1.49
HMGN2P28-201ENST00000606102 MBIPQ9NS73 344 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms