RNA–Protein interactions for RNA: ENST00000602998.1

SH3YL1-227, Transcript of SH3 and SYLF domain containing 1, humanhuman

Gene SH3YL1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-227ENST00000602998 GNPATO15228 680 aa13.78□□□□□ -0.2
SH3YL1-227ENST00000602998 SLC4A9Q96Q91 983 aa13.78□□□□□ -0.2
SH3YL1-227ENST00000602998 HSPA6P17066 643 aa13.77□□□□□ -0.21
SH3YL1-227ENST00000602998 SSFA2P28290 1259 aa13.77□□□□□ -0.21
SH3YL1-227ENST00000602998 KIF24Q5T7B8 1368 aa13.77□□□□□ -0.21
SH3YL1-227ENST00000602998 MYH14Q7Z406 1995 aaKnown RBP13.77□□□□□ -0.21
SH3YL1-227ENST00000602998 ATG3Q9NT62 314 aa13.77□□□□□ -0.21
SH3YL1-227ENST00000602998 WASHC2AQ641Q2 1341 aa13.76□□□□□ -0.21
SH3YL1-227ENST00000602998 MMP10P09238 476 aa13.76□□□□□ -0.21
SH3YL1-227ENST00000602998 PHKG2P15735 406 aa13.76□□□□□ -0.21
SH3YL1-227ENST00000602998 ATP6V1AP38606 617 aa13.76□□□□□ -0.21
SH3YL1-227ENST00000602998 TMOD3Q9NYL9 352 aa13.76□□□□□ -0.21
SH3YL1-227ENST00000602998 POLKQ9UBT6 870 aa13.76□□□□□ -0.21
SH3YL1-227ENST00000602998 PXDNLA1KZ92 1463 aa13.75□□□□□ -0.21
SH3YL1-227ENST00000602998 SLC24A1O60721 1099 aa13.75□□□□□ -0.21
SH3YL1-227ENST00000602998 SPG7Q9UQ90 795 aa13.75□□□□□ -0.21
SH3YL1-227ENST00000602998 KIF13BQ9NQT8 1826 aa13.75□□□□□ -0.21
SH3YL1-227ENST00000602998 A0A0G2JLW4 131 aa13.74□□□□□ -0.21
SH3YL1-227ENST00000602998 TNNT2P45379 298 aaPredicted RBP13.74□□□□□ -0.21
SH3YL1-227ENST00000602998 EIF4A2Q14240 407 aaKnown RBP13.74□□□□□ -0.21
SH3YL1-227ENST00000602998 KDRP35968 1356 aa13.73□□□□□ -0.21
SH3YL1-227ENST00000602998 CICQ96RK0 1608 aaPredicted RBP13.73□□□□□ -0.21
SH3YL1-227ENST00000602998 IFNL2Q8IZJ0 200 aa13.73□□□□□ -0.21
SH3YL1-227ENST00000602998 PCNTO95613 3336 aa13.72□□□□□ -0.21
SH3YL1-227ENST00000602998 BRCA1P38398 1863 aaKnown RBP13.72□□□□□ -0.21
SH3YL1-227ENST00000602998 COL5A3P25940 1745 aaPredicted RBP13.71□□□□□ -0.21
SH3YL1-227ENST00000602998 DPEP1P16444 411 aa13.71□□□□□ -0.21
SH3YL1-227ENST00000602998 ARHGEF1Q92888 912 aaKnown RBP13.71□□□□□ -0.21
SH3YL1-227ENST00000602998 RBM42Q9BTD8 480 aaKnown RBP13.71□□□□□ -0.21
SH3YL1-227ENST00000602998 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.71□□□□□ -0.21
SH3YL1-227ENST00000602998 BCS1LQ9Y276 419 aa13.71□□□□□ -0.21
SH3YL1-227ENST00000602998 CDCA8Q53HL2 280 aa13.7□□□□□ -0.22
SH3YL1-227ENST00000602998 TRAPPC3LQ5T215 181 aa13.7□□□□□ -0.22
SH3YL1-227ENST00000602998 POLR3GLQ9BT43 218 aa13.7□□□□□ -0.22
SH3YL1-227ENST00000602998 NMRK2Q9NPI5 230 aa13.7□□□□□ -0.22
SH3YL1-227ENST00000602998 C4AP0C0L4 1744 aa13.7□□□□□ -0.22
SH3YL1-227ENST00000602998 GYS1P13807 737 aa13.69□□□□□ -0.22
SH3YL1-227ENST00000602998 KDM6AO15550 1401 aaPredicted RBP13.69□□□□□ -0.22
SH3YL1-227ENST00000602998 C10orf71Q711Q0 1435 aa13.69□□□□□ -0.22
SH3YL1-227ENST00000602998 KCNA3P22001 575 aa13.68□□□□□ -0.22
SH3YL1-227ENST00000602998 HMGB2P26583 209 aaKnown RBP13.68□□□□□ -0.22
SH3YL1-227ENST00000602998 HTRA3P83110 453 aa13.68□□□□□ -0.22
SH3YL1-227ENST00000602998 ARHGAP27Q6ZUM4 889 aa13.68□□□□□ -0.22
SH3YL1-227ENST00000602998 SRP68Q9UHB9 627 aaKnown RBP13.68□□□□□ -0.22
SH3YL1-227ENST00000602998 RTCBQ9Y3I0 505 aaKnown RBP13.68□□□□□ -0.22
SH3YL1-227ENST00000602998 TGFB2P61812 414 aa13.67□□□□□ -0.22
SH3YL1-227ENST00000602998 AEBP1Q8IUX7 1158 aa13.67□□□□□ -0.22
SH3YL1-227ENST00000602998 DNAJC5GQ8N7S2 189 aa13.67□□□□□ -0.22
SH3YL1-227ENST00000602998 FCHSD2O94868 740 aa13.66□□□□□ -0.22
SH3YL1-227ENST00000602998 NLGN1Q8N2Q7 840 aa13.66□□□□□ -0.22
SH3YL1-227ENST00000602998 ZNF831Q5JPB2 1677 aa13.66□□□□□ -0.22
SH3YL1-227ENST00000602998 ARFGEF1Q9Y6D6 1849 aa13.65□□□□□ -0.22
SH3YL1-227ENST00000602998 ERVV-2B6SEH9 535 aa13.65□□□□□ -0.22
SH3YL1-227ENST00000602998 PTCD1O75127 700 aaKnown RBP13.65□□□□□ -0.22
SH3YL1-227ENST00000602998 RPS6KA4O75676 772 aa13.65□□□□□ -0.22
SH3YL1-227ENST00000602998 DDR1Q08345 913 aa13.65□□□□□ -0.22
SH3YL1-227ENST00000602998 FKBP8Q14318 412 aa13.65□□□□□ -0.22
SH3YL1-227ENST00000602998 RC3H1Q5TC82 1133 aaKnown RBP13.65□□□□□ -0.22
SH3YL1-227ENST00000602998 ZNF530Q6P9A1 599 aaPredicted RBP13.65□□□□□ -0.22
SH3YL1-227ENST00000602998 CNTNAP4Q9C0A0 1308 aa13.64□□□□□ -0.23
SH3YL1-227ENST00000602998 SBF1O95248 1867 aa13.64□□□□□ -0.23
SH3YL1-227ENST00000602998 RFC4P35249 363 aa13.64□□□□□ -0.23
SH3YL1-227ENST00000602998 C9orf131Q5VYM1 1079 aa13.64□□□□□ -0.23
SH3YL1-227ENST00000602998 DCAF5Q96JK2 942 aa13.64□□□□□ -0.23
SH3YL1-227ENST00000602998 TJP1Q07157 1748 aa13.64□□□□□ -0.23
SH3YL1-227ENST00000602998 TOMM70O94826 608 aa13.63□□□□□ -0.23
SH3YL1-227ENST00000602998 CHRNA5P30532 468 aa13.63□□□□□ -0.23
SH3YL1-227ENST00000602998 CRKLP46109 303 aaKnown RBP13.63□□□□□ -0.23
SH3YL1-227ENST00000602998 CABP4P57796 275 aa13.63□□□□□ -0.23
SH3YL1-227ENST00000602998 NFATC2IPQ8NCF5 419 aa13.63□□□□□ -0.23
SH3YL1-227ENST00000602998 CCDC87Q9NVE4 849 aa13.63□□□□□ -0.23
SH3YL1-227ENST00000602998 PARP3Q9Y6F1 533 aa13.63□□□□□ -0.23
SH3YL1-227ENST00000602998 ADAMTS7Q9UKP4 1686 aa13.63□□□□□ -0.23
SH3YL1-227ENST00000602998 APLP1P51693 650 aa13.62□□□□□ -0.23
SH3YL1-227ENST00000602998 PLEKHO1Q53GL0 409 aaPredicted RBP13.62□□□□□ -0.23
SH3YL1-227ENST00000602998 PANK3Q9H999 370 aa13.62□□□□□ -0.23
SH3YL1-227ENST00000602998 WDR90Q96KV7 1748 aa13.61□□□□□ -0.23
SH3YL1-227ENST00000602998 KCPQ6ZWJ8 1503 aa13.61□□□□□ -0.23
SH3YL1-227ENST00000602998 MTHFSP49914 203 aa13.61□□□□□ -0.23
SH3YL1-227ENST00000602998 INTS5Q6P9B9 1019 aaKnown RBP13.6□□□□□ -0.23
SH3YL1-227ENST00000602998 SCN11AQ9UI33 1791 aa13.6□□□□□ -0.23
SH3YL1-227ENST00000602998 USP42Q9H9J4 1324 aaKnown RBP13.6□□□□□ -0.23
SH3YL1-227ENST00000602998 AFDNP55196 1824 aaKnown RBP13.6□□□□□ -0.23
SH3YL1-227ENST00000602998 HSP90AB1P08238 724 aaKnown RBP13.59□□□□□ -0.23
SH3YL1-227ENST00000602998 PIM2Q9P1W9 311 aa13.59□□□□□ -0.23
SH3YL1-227ENST00000602998 VIRMAQ69YN4 1812 aaKnown RBP13.59□□□□□ -0.23
SH3YL1-227ENST00000602998 POLRMTO00411 1230 aaKnown RBP13.58□□□□□ -0.24
SH3YL1-227ENST00000602998 PRELPP51888 382 aa13.58□□□□□ -0.24
SH3YL1-227ENST00000602998 SULT6B1Q6IMI4 303 aa13.58□□□□□ -0.24
SH3YL1-227ENST00000602998 DNAJC10Q8IXB1 793 aa13.58□□□□□ -0.24
SH3YL1-227ENST00000602998 RRAGCQ9HB90 399 aa13.58□□□□□ -0.24
SH3YL1-227ENST00000602998 LGR6Q9HBX8 967 aa13.58□□□□□ -0.24
SH3YL1-227ENST00000602998 RNF181Q9P0P0 153 aa13.58□□□□□ -0.24
SH3YL1-227ENST00000602998 CCDC88AQ3V6T2 1871 aa13.58□□□□□ -0.24
SH3YL1-227ENST00000602998 HSPA5P11021 654 aaKnown RBP13.57□□□□□ -0.24
SH3YL1-227ENST00000602998 TM4SF1P30408 202 aa13.57□□□□□ -0.24
SH3YL1-227ENST00000602998 RASSF7Q02833 373 aa13.57□□□□□ -0.24
SH3YL1-227ENST00000602998 SLC39A6Q13433 755 aa13.57□□□□□ -0.24
SH3YL1-227ENST00000602998 AMOTQ4VCS5 1084 aa13.57□□□□□ -0.24
SH3YL1-227ENST00000602998 DALRD3Q5D0E6 543 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms