RNA–Protein interactions for RNA: ENST00000602800.1

PPFIA3-210, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-210ENST00000602800 ATG3Q9NT62 314 aa26.45■■□□□ 1.82
PPFIA3-210ENST00000602800 ADCY9O60503 1353 aa26.45■■□□□ 1.82
PPFIA3-210ENST00000602800 TNNT2P45379 298 aaPredicted RBP26.44■■□□□ 1.82
PPFIA3-210ENST00000602800 UBR3Q6ZT12 1888 aa26.42■■□□□ 1.82
PPFIA3-210ENST00000602800 MMP10P09238 476 aa26.42■■□□□ 1.82
PPFIA3-210ENST00000602800 PLEKHG2Q9H7P9 1386 aa26.42■■□□□ 1.82
PPFIA3-210ENST00000602800 RTCBQ9Y3I0 505 aaKnown RBP26.41■■□□□ 1.82
PPFIA3-210ENST00000602800 ANKRD26Q9UPS8 1709 aa26.41■■□□□ 1.82
PPFIA3-210ENST00000602800 HSP90AB1P08238 724 aaKnown RBP26.4■■□□□ 1.82
PPFIA3-210ENST00000602800 TRAPPC3LQ5T215 181 aa26.4■■□□□ 1.82
PPFIA3-210ENST00000602800 MAP2P11137 1827 aaKnown RBP26.39■■□□□ 1.82
PPFIA3-210ENST00000602800 ERVV-2B6SEH9 535 aa26.39■■□□□ 1.82
PPFIA3-210ENST00000602800 RBM42Q9BTD8 480 aaKnown RBP26.39■■□□□ 1.82
PPFIA3-210ENST00000602800 NLGN1Q8N2Q7 840 aa26.38■■□□□ 1.81
PPFIA3-210ENST00000602800 DCAF5Q96JK2 942 aa26.38■■□□□ 1.81
PPFIA3-210ENST00000602800 PLEKHO1Q53GL0 409 aaPredicted RBP26.37■■□□□ 1.81
PPFIA3-210ENST00000602800 KDRP35968 1356 aa26.35■■□□□ 1.81
PPFIA3-210ENST00000602800 HSPA6P17066 643 aa26.35■■□□□ 1.81
PPFIA3-210ENST00000602800 ADRA2BP18089 450 aa26.35■■□□□ 1.81
PPFIA3-210ENST00000602800 TGFB2P61812 414 aa26.35■■□□□ 1.81
PPFIA3-210ENST00000602800 RC3H1Q5TC82 1133 aaKnown RBP26.34■■□□□ 1.81
PPFIA3-210ENST00000602800 SLC4A9Q96Q91 983 aa26.34■■□□□ 1.81
PPFIA3-210ENST00000602800 CABP4P57796 275 aa26.33■■□□□ 1.81
PPFIA3-210ENST00000602800 AMOTQ4VCS5 1084 aa26.33■■□□□ 1.81
PPFIA3-210ENST00000602800 ZNF530Q6P9A1 599 aaPredicted RBP26.33■■□□□ 1.81
PPFIA3-210ENST00000602800 ARHGEF1Q92888 912 aaKnown RBP26.33■■□□□ 1.81
PPFIA3-210ENST00000602800 RFC4P35249 363 aa26.32■■□□□ 1.8
PPFIA3-210ENST00000602800 BCS1LQ9Y276 419 aa26.32■■□□□ 1.8
PPFIA3-210ENST00000602800 PXDNLA1KZ92 1463 aa26.31■■□□□ 1.8
PPFIA3-210ENST00000602800 IFFO2Q5TF58 517 aa26.31■■□□□ 1.8
PPFIA3-210ENST00000602800 CCDC87Q9NVE4 849 aa26.31■■□□□ 1.8
PPFIA3-210ENST00000602800 CNTNAP4Q9C0A0 1308 aa26.31■■□□□ 1.8
PPFIA3-210ENST00000602800 A0A0G2JLW4 131 aa26.3■■□□□ 1.8
PPFIA3-210ENST00000602800 RPS6KA4O75676 772 aa26.3■■□□□ 1.8
PPFIA3-210ENST00000602800 PANK3Q9H999 370 aa26.3■■□□□ 1.8
PPFIA3-210ENST00000602800 PARP3Q9Y6F1 533 aa26.29■■□□□ 1.8
PPFIA3-210ENST00000602800 KIF3CO14782 793 aa26.28■■□□□ 1.8
PPFIA3-210ENST00000602800 GYS1P13807 737 aa26.28■■□□□ 1.8
PPFIA3-210ENST00000602800 MTHFSP49914 203 aa26.28■■□□□ 1.8
PPFIA3-210ENST00000602800 EIF4G2P78344 907 aaKnown RBP eCLIP26.28■■□□□ 1.8
PPFIA3-210ENST00000602800 C1orf141Q5JVX7 400 aa26.28■■□□□ 1.8
PPFIA3-210ENST00000602800 C10orf71Q711Q0 1435 aa26.27■■□□□ 1.8
PPFIA3-210ENST00000602800 CICQ96RK0 1608 aaPredicted RBP26.27■■□□□ 1.8
PPFIA3-210ENST00000602800 ARHGAP27Q6ZUM4 889 aa26.26■■□□□ 1.79
PPFIA3-210ENST00000602800 KDM6AO15550 1401 aaPredicted RBP26.25■■□□□ 1.79
PPFIA3-210ENST00000602800 PTCD1O75127 700 aaKnown RBP26.25■■□□□ 1.79
PPFIA3-210ENST00000602800 DPEP1P16444 411 aa26.25■■□□□ 1.79
PPFIA3-210ENST00000602800 MORC1Q86VD1 984 aa26.25■■□□□ 1.79
PPFIA3-210ENST00000602800 FCHSD2O94868 740 aa26.24■■□□□ 1.79
PPFIA3-210ENST00000602800 HSPA5P11021 654 aaKnown RBP26.23■■□□□ 1.79
PPFIA3-210ENST00000602800 AEBP1Q8IUX7 1158 aa26.23■■□□□ 1.79
PPFIA3-210ENST00000602800 NFATC2IPQ8NCF5 419 aa26.22■■□□□ 1.79
PPFIA3-210ENST00000602800 ZNF831Q5JPB2 1677 aa26.22■■□□□ 1.79
PPFIA3-210ENST00000602800 CRKLP46109 303 aaKnown RBP26.21■■□□□ 1.79
PPFIA3-210ENST00000602800 SULT6B1Q6IMI4 303 aa26.2■■□□□ 1.78
PPFIA3-210ENST00000602800 KIF13BQ9NQT8 1826 aa26.18■■□□□ 1.78
PPFIA3-210ENST00000602800 TOMM70O94826 608 aa26.18■■□□□ 1.78
PPFIA3-210ENST00000602800 ZEB1P37275 1124 aaPredicted RBP26.18■■□□□ 1.78
PPFIA3-210ENST00000602800 PIM2Q9P1W9 311 aa26.18■■□□□ 1.78
PPFIA3-210ENST00000602800 APLP1P51693 650 aa26.17■■□□□ 1.78
PPFIA3-210ENST00000602800 SRP68Q9UHB9 627 aaKnown RBP26.17■■□□□ 1.78
PPFIA3-210ENST00000602800 KNSTRNQ9Y448 316 aa26.17■■□□□ 1.78
PPFIA3-210ENST00000602800 C4AP0C0L4 1744 aa26.17■■□□□ 1.78
PPFIA3-210ENST00000602800 USP42Q9H9J4 1324 aaKnown RBP26.16■■□□□ 1.78
PPFIA3-210ENST00000602800 KCNA3P22001 575 aa26.16■■□□□ 1.78
PPFIA3-210ENST00000602800 COL5A3P25940 1745 aaPredicted RBP26.15■■□□□ 1.78
PPFIA3-210ENST00000602800 FKBP8Q14318 412 aa26.15■■□□□ 1.78
PPFIA3-210ENST00000602800 N4BP2Q86UW6 1770 aaPredicted RBP26.15■■□□□ 1.78
PPFIA3-210ENST00000602800 KIAA1551Q9HCM1 1747 aa26.14■■□□□ 1.78
PPFIA3-210ENST00000602800 IL13P35225 146 aa26.14■■□□□ 1.78
PPFIA3-210ENST00000602800 DALRD3Q5D0E6 543 aaKnown RBP26.14■■□□□ 1.78
PPFIA3-210ENST00000602800 C9orf131Q5VYM1 1079 aa26.14■■□□□ 1.78
PPFIA3-210ENST00000602800 NMRK2Q9NPI5 230 aa26.13■■□□□ 1.77
PPFIA3-210ENST00000602800 DDR1Q08345 913 aa26.12■■□□□ 1.77
PPFIA3-210ENST00000602800 AKAP4Q5JQC9 854 aa26.12■■□□□ 1.77
PPFIA3-210ENST00000602800 ZPR1O75312 459 aa26.11■■□□□ 1.77
PPFIA3-210ENST00000602800 INTS5Q6P9B9 1019 aaKnown RBP26.11■■□□□ 1.77
PPFIA3-210ENST00000602800 MYH14Q7Z406 1995 aaKnown RBP26.1■■□□□ 1.77
PPFIA3-210ENST00000602800 SLC52A2Q9HAB3 445 aa26.1■■□□□ 1.77
PPFIA3-210ENST00000602800 C16orf71Q8IYS4 520 aaPredicted RBP26.09■■□□□ 1.77
PPFIA3-210ENST00000602800 DNAJC10Q8IXB1 793 aa26.08■■□□□ 1.77
PPFIA3-210ENST00000602800 POLRMTO00411 1230 aaKnown RBP26.07■■□□□ 1.76
PPFIA3-210ENST00000602800 CHRNA5P30532 468 aa26.07■■□□□ 1.76
PPFIA3-210ENST00000602800 TM4SF1P30408 202 aa26.06■■□□□ 1.76
PPFIA3-210ENST00000602800 USPL1Q5W0Q7 1092 aa26.06■■□□□ 1.76
PPFIA3-210ENST00000602800 RBM46Q8TBY0 533 aaKnown RBP26.06■■□□□ 1.76
PPFIA3-210ENST00000602800 LGR6Q9HBX8 967 aa26.06■■□□□ 1.76
PPFIA3-210ENST00000602800 RNF181Q9P0P0 153 aa26.06■■□□□ 1.76
PPFIA3-210ENST00000602800 KDM2BQ8NHM5 1336 aa26.06■■□□□ 1.76
PPFIA3-210ENST00000602800 RNMTO43148 476 aaKnown RBP26.04■■□□□ 1.76
PPFIA3-210ENST00000602800 SOS1Q07889 1333 aaPredicted RBP26.04■■□□□ 1.76
PPFIA3-210ENST00000602800 CYP19A1P11511 503 aaPredicted RBP26.03■■□□□ 1.76
PPFIA3-210ENST00000602800 SLC39A6Q13433 755 aa26.03■■□□□ 1.76
PPFIA3-210ENST00000602800 AMER1Q5JTC6 1135 aaPredicted RBP26.03■■□□□ 1.76
PPFIA3-210ENST00000602800 HMOX1P09601 288 aa26.02■■□□□ 1.76
PPFIA3-210ENST00000602800 DNAJC5GQ8N7S2 189 aa26.02■■□□□ 1.76
PPFIA3-210ENST00000602800 BRCA1P38398 1863 aaKnown RBP26.01■■□□□ 1.75
PPFIA3-210ENST00000602800 TJP1Q07157 1748 aa26.01■■□□□ 1.75
PPFIA3-210ENST00000602800 NARFQ9UHQ1 456 aa26.01■■□□□ 1.75
PPFIA3-210ENST00000602800 COL15A1P39059 1388 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms