RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 TEFQ10587 303 aa22.35■■□□□ 1.17
PPFIA3-207ENST00000602716 TCERG1O14776 1098 aaKnown RBP22.34■■□□□ 1.17
PPFIA3-207ENST00000602716 MEX3CQ5U5Q3 659 aaKnown RBP22.34■■□□□ 1.17
PPFIA3-207ENST00000602716 CT47B1P0C2W7 299 aaPredicted RBP22.33■■□□□ 1.17
PPFIA3-207ENST00000602716 TNNQ9UQP3 1299 aa22.33■■□□□ 1.17
PPFIA3-207ENST00000602716 TNS2Q63HR2 1409 aa22.33■■□□□ 1.17
PPFIA3-207ENST00000602716 TOGARAM1Q9Y4F4 1720 aa22.33■■□□□ 1.17
PPFIA3-207ENST00000602716 DCAF5Q96JK2 942 aa22.33■■□□□ 1.16
PPFIA3-207ENST00000602716 USP21Q9UK80 565 aa22.32■■□□□ 1.16
PPFIA3-207ENST00000602716 AFF2P51816 1311 aa22.31■■□□□ 1.16
PPFIA3-207ENST00000602716 SMC4Q9NTJ3 1288 aa22.31■■□□□ 1.16
PPFIA3-207ENST00000602716 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.31■■□□□ 1.16
PPFIA3-207ENST00000602716 MSH5O43196 834 aa22.31■■□□□ 1.16
PPFIA3-207ENST00000602716 VPS72Q15906 364 aa22.31■■□□□ 1.16
PPFIA3-207ENST00000602716 SLC52A2Q9HAB3 445 aa22.31■■□□□ 1.16
PPFIA3-207ENST00000602716 BTBD11A6QL63 1104 aa22.3■■□□□ 1.16
PPFIA3-207ENST00000602716 NFATC2IPQ8NCF5 419 aa22.29■■□□□ 1.16
PPFIA3-207ENST00000602716 FRAT1Q92837 279 aaPredicted RBP22.29■■□□□ 1.16
PPFIA3-207ENST00000602716 NKX1-1Q15270 411 aaPredicted RBP22.28■■□□□ 1.16
PPFIA3-207ENST00000602716 THRAP3Q9Y2W1 955 aaKnown RBP22.28■■□□□ 1.16
PPFIA3-207ENST00000602716 SLC39A6Q13433 755 aa22.28■■□□□ 1.16
PPFIA3-207ENST00000602716 FAM98CQ17RN3 349 aaKnown RBP22.28■■□□□ 1.16
PPFIA3-207ENST00000602716 BABAM1Q9NWV8 329 aa22.28■■□□□ 1.16
PPFIA3-207ENST00000602716 HSP90AB1P08238 724 aaKnown RBP22.27■■□□□ 1.16
PPFIA3-207ENST00000602716 EIF4A1P60842 406 aaKnown RBP22.27■■□□□ 1.16
PPFIA3-207ENST00000602716 GLI3P10071 1580 aa22.27■■□□□ 1.16
PPFIA3-207ENST00000602716 BARGINQ6ZT62 677 aa22.26■■□□□ 1.15
PPFIA3-207ENST00000602716 EXOC6Q8TAG9 804 aa22.26■■□□□ 1.15
PPFIA3-207ENST00000602716 ALDH1L2Q3SY69 923 aa22.25■■□□□ 1.15
PPFIA3-207ENST00000602716 CRBNQ96SW2 442 aa22.25■■□□□ 1.15
PPFIA3-207ENST00000602716 MRPL50Q8N5N7 158 aaKnown RBP22.24■■□□□ 1.15
PPFIA3-207ENST00000602716 EXOC5O00471 708 aa22.24■■□□□ 1.15
PPFIA3-207ENST00000602716 RLBP1P12271 317 aa22.24■■□□□ 1.15
PPFIA3-207ENST00000602716 CABP4P57796 275 aa22.24■■□□□ 1.15
PPFIA3-207ENST00000602716 PRAMEF22A3QJZ6 481 aa22.23■■□□□ 1.15
PPFIA3-207ENST00000602716 CANXP27824 592 aaKnown RBP22.23■■□□□ 1.15
PPFIA3-207ENST00000602716 DDB1Q16531 1140 aa22.23■■□□□ 1.15
PPFIA3-207ENST00000602716 PANK1Q8TE04 598 aa22.23■■□□□ 1.15
PPFIA3-207ENST00000602716 ATRNO75882 1429 aa22.23■■□□□ 1.15
PPFIA3-207ENST00000602716 NECTIN2Q92692 538 aa22.23■■□□□ 1.15
PPFIA3-207ENST00000602716 CDCA7Q9BWT1 371 aaPredicted RBP22.23■■□□□ 1.15
PPFIA3-207ENST00000602716 NOB1Q9ULX3 412 aaKnown RBP22.23■■□□□ 1.15
PPFIA3-207ENST00000602716 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.22■■□□□ 1.15
PPFIA3-207ENST00000602716 THSD7AQ9UPZ6 1657 aa22.21■■□□□ 1.15
PPFIA3-207ENST00000602716 MARCH10Q8NA82 808 aaPredicted RBP22.21■■□□□ 1.15
PPFIA3-207ENST00000602716 CLUAP1Q96AJ1 413 aa22.21■■□□□ 1.15
PPFIA3-207ENST00000602716 ZNF428Q96B54 188 aa22.21■■□□□ 1.15
PPFIA3-207ENST00000602716 HEG1Q9ULI3 1381 aa22.21■■□□□ 1.15
PPFIA3-207ENST00000602716 ZNF790Q6PG37 636 aa22.21■■□□□ 1.15
PPFIA3-207ENST00000602716 PAPPAQ13219 1627 aa22.21■■□□□ 1.15
PPFIA3-207ENST00000602716 TRIM27P14373 513 aa22.2■■□□□ 1.14
PPFIA3-207ENST00000602716 C5P01031 1676 aa22.2■■□□□ 1.14
PPFIA3-207ENST00000602716 ERVV-2B6SEH9 535 aa22.19■■□□□ 1.14
PPFIA3-207ENST00000602716 DOT1LQ8TEK3 1739 aa22.19■■□□□ 1.14
PPFIA3-207ENST00000602716 KIF16BQ96L93 1317 aa22.19■■□□□ 1.14
PPFIA3-207ENST00000602716 ZKSCAN2Q63HK3 967 aa22.18■■□□□ 1.14
PPFIA3-207ENST00000602716 ZNF496Q96IT1 587 aaPredicted RBP22.18■■□□□ 1.14
PPFIA3-207ENST00000602716 BRPF1P55201 1214 aaPredicted RBP22.18■■□□□ 1.14
PPFIA3-207ENST00000602716 GJD4Q96KN9 370 aaPredicted RBP22.18■■□□□ 1.14
PPFIA3-207ENST00000602716 KCPQ6ZWJ8 1503 aa22.17■■□□□ 1.14
PPFIA3-207ENST00000602716 A0A0G2JS52 829 aa22.16■■□□□ 1.14
PPFIA3-207ENST00000602716 GIGYF1O75420 1035 aaPredicted RBP22.16■■□□□ 1.14
PPFIA3-207ENST00000602716 COG6Q9Y2V7 657 aa22.16■■□□□ 1.14
PPFIA3-207ENST00000602716 RGS12O14924 1447 aa22.16■■□□□ 1.14
PPFIA3-207ENST00000602716 HDGFL1Q5TGJ6 251 aa22.16■■□□□ 1.14
PPFIA3-207ENST00000602716 ATF7IPQ6VMQ6 1270 aa22.16■■□□□ 1.14
PPFIA3-207ENST00000602716 G2E3Q7L622 706 aa22.16■■□□□ 1.14
PPFIA3-207ENST00000602716 CCDC136Q96JN2 1154 aa22.16■■□□□ 1.14
PPFIA3-207ENST00000602716 EIF2S2P20042 333 aaKnown RBP22.15■■□□□ 1.14
PPFIA3-207ENST00000602716 PIGBQ92521 554 aa22.15■■□□□ 1.14
PPFIA3-207ENST00000602716 PDE3AQ14432 1141 aa22.14■■□□□ 1.14
PPFIA3-207ENST00000602716 FBXO41Q8TF61 875 aa22.14■■□□□ 1.14
PPFIA3-207ENST00000602716 TMOD3Q9NYL9 352 aa22.14■■□□□ 1.14
PPFIA3-207ENST00000602716 TRPC5Q9UL62 973 aaPredicted RBP22.14■■□□□ 1.14
PPFIA3-207ENST00000602716 ITGB4P16144 1822 aa22.14■■□□□ 1.14
PPFIA3-207ENST00000602716 UBR2Q8IWV8 1755 aa22.14■■□□□ 1.14
PPFIA3-207ENST00000602716 SLC4A2P04920 1241 aa22.14■■□□□ 1.13
PPFIA3-207ENST00000602716 BCL9O00512 1426 aa22.13■■□□□ 1.13
PPFIA3-207ENST00000602716 TTC5Q8N0Z6 440 aa22.13■■□□□ 1.13
PPFIA3-207ENST00000602716 ACSBG1Q96GR2 724 aa22.13■■□□□ 1.13
PPFIA3-207ENST00000602716 ANXA1P04083 346 aa22.13■■□□□ 1.13
PPFIA3-207ENST00000602716 DZIP1LQ8IYY4 767 aaKnown RBP22.13■■□□□ 1.13
PPFIA3-207ENST00000602716 SOS1Q07889 1333 aaPredicted RBP22.12■■□□□ 1.13
PPFIA3-207ENST00000602716 HOXB7P09629 217 aa22.12■■□□□ 1.13
PPFIA3-207ENST00000602716 CHPF2Q9P2E5 772 aa22.12■■□□□ 1.13
PPFIA3-207ENST00000602716 ASAP1Q9ULH1 1129 aa22.12■■□□□ 1.13
PPFIA3-207ENST00000602716 PRIM1P49642 420 aaKnown RBP22.11■■□□□ 1.13
PPFIA3-207ENST00000602716 CCDC30Q5VVM6 783 aa22.11■■□□□ 1.13
PPFIA3-207ENST00000602716 SYTL4Q96C24 671 aaPredicted RBP22.11■■□□□ 1.13
PPFIA3-207ENST00000602716 QTRT2Q9H974 415 aaKnown RBP22.11■■□□□ 1.13
PPFIA3-207ENST00000602716 PROSER3Q2NL68 480 aa22.11■■□□□ 1.13
PPFIA3-207ENST00000602716 FAM182BQ5T319 152 aa22.11■■□□□ 1.13
PPFIA3-207ENST00000602716 FTSJ3Q8IY81 847 aaKnown RBP22.11■■□□□ 1.13
PPFIA3-207ENST00000602716 TMEM57Q8N5G2 664 aa22.1■■□□□ 1.13
PPFIA3-207ENST00000602716 PTCD1O75127 700 aaKnown RBP22.09■■□□□ 1.13
PPFIA3-207ENST00000602716 FMNL2Q96PY5 1086 aa22.09■■□□□ 1.13
PPFIA3-207ENST00000602716 STK31Q9BXU1 1019 aa22.09■■□□□ 1.13
PPFIA3-207ENST00000602716 ATG3Q9NT62 314 aa22.09■■□□□ 1.13
PPFIA3-207ENST00000602716 ABCC4O15439 1325 aa22.08■■□□□ 1.13
PPFIA3-207ENST00000602716 IPO8O15397 1037 aaKnown RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms