RNA–Protein interactions for RNA: ENST00000598684.5

CAPN12-210, Transcript of calpain 12, humanhuman

TSL 4

Gene CAPN12, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-210ENST00000598684 SPG7Q9UQ90 795 aa22.47■■□□□ 1.19
CAPN12-210ENST00000598684 ATP6V1AP38606 617 aa22.46■■□□□ 1.19
CAPN12-210ENST00000598684 DNAJC5GQ8N7S2 189 aa22.46■■□□□ 1.19
CAPN12-210ENST00000598684 EMILIN1Q9Y6C2 1016 aa22.46■■□□□ 1.19
CAPN12-210ENST00000598684 A0A0G2JLW4 131 aa22.45■■□□□ 1.18
CAPN12-210ENST00000598684 KIF20BQ96Q89 1820 aa22.45■■□□□ 1.18
CAPN12-210ENST00000598684 PPM1GO15355 546 aaPredicted RBP22.44■■□□□ 1.18
CAPN12-210ENST00000598684 ARHGAP27Q6ZUM4 889 aa22.44■■□□□ 1.18
CAPN12-210ENST00000598684 NMRK2Q9NPI5 230 aa22.44■■□□□ 1.18
CAPN12-210ENST00000598684 TGFB2P61812 414 aa22.43■■□□□ 1.18
CAPN12-210ENST00000598684 NCAPD2Q15021 1401 aa22.42■■□□□ 1.18
CAPN12-210ENST00000598684 N4BP2Q86UW6 1770 aaPredicted RBP22.42■■□□□ 1.18
CAPN12-210ENST00000598684 KIAA1551Q9HCM1 1747 aa22.42■■□□□ 1.18
CAPN12-210ENST00000598684 KIF13BQ9NQT8 1826 aa22.41■■□□□ 1.18
CAPN12-210ENST00000598684 C10orf71Q711Q0 1435 aa22.4■■□□□ 1.18
CAPN12-210ENST00000598684 TRAPPC3LQ5T215 181 aa22.4■■□□□ 1.18
CAPN12-210ENST00000598684 NLGN1Q8N2Q7 840 aa22.4■■□□□ 1.18
CAPN12-210ENST00000598684 ATG3Q9NT62 314 aa22.4■■□□□ 1.18
CAPN12-210ENST00000598684 RTCBQ9Y3I0 505 aaKnown RBP22.4■■□□□ 1.18
CAPN12-210ENST00000598684 FCHSD2O94868 740 aa22.39■■□□□ 1.17
CAPN12-210ENST00000598684 DPEP1P16444 411 aa22.39■■□□□ 1.17
CAPN12-210ENST00000598684 PHKG2P15735 406 aa22.38■■□□□ 1.17
CAPN12-210ENST00000598684 IFNL2Q8IZJ0 200 aa22.38■■□□□ 1.17
CAPN12-210ENST00000598684 EYA1Q99502 592 aa22.38■■□□□ 1.17
CAPN12-210ENST00000598684 CCDC87Q9NVE4 849 aa22.38■■□□□ 1.17
CAPN12-210ENST00000598684 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.38■■□□□ 1.17
CAPN12-210ENST00000598684 HTRA3P83110 453 aa22.37■■□□□ 1.17
CAPN12-210ENST00000598684 C16orf71Q8IYS4 520 aaPredicted RBP22.37■■□□□ 1.17
CAPN12-210ENST00000598684 KIF7Q2M1P5 1343 aa22.36■■□□□ 1.17
CAPN12-210ENST00000598684 RBM46Q8TBY0 533 aaKnown RBP22.36■■□□□ 1.17
CAPN12-210ENST00000598684 CARD14Q9BXL6 1004 aa22.36■■□□□ 1.17
CAPN12-210ENST00000598684 WDR90Q96KV7 1748 aa22.36■■□□□ 1.17
CAPN12-210ENST00000598684 KDRP35968 1356 aa22.36■■□□□ 1.17
CAPN12-210ENST00000598684 C9orf131Q5VYM1 1079 aa22.35■■□□□ 1.17
CAPN12-210ENST00000598684 ARHGEF1Q92888 912 aaKnown RBP22.35■■□□□ 1.17
CAPN12-210ENST00000598684 RBM42Q9BTD8 480 aaKnown RBP22.35■■□□□ 1.17
CAPN12-210ENST00000598684 C4AP0C0L4 1744 aa22.34■■□□□ 1.17
CAPN12-210ENST00000598684 WASHC2AQ641Q2 1341 aa22.34■■□□□ 1.17
CAPN12-210ENST00000598684 PARP3Q9Y6F1 533 aa22.34■■□□□ 1.17
CAPN12-210ENST00000598684 GYS1P13807 737 aa22.33■■□□□ 1.17
CAPN12-210ENST00000598684 RFC4P35249 363 aa22.33■■□□□ 1.17
CAPN12-210ENST00000598684 KLRG1Q96E93 195 aa22.33■■□□□ 1.17
CAPN12-210ENST00000598684 SLC4A9Q96Q91 983 aa22.33■■□□□ 1.17
CAPN12-210ENST00000598684 ADRA2BP18089 450 aa22.32■■□□□ 1.16
CAPN12-210ENST00000598684 COL13A1Q5TAT6 717 aaPredicted RBP22.32■■□□□ 1.16
CAPN12-210ENST00000598684 PLEKHG2Q9H7P9 1386 aa22.32■■□□□ 1.16
CAPN12-210ENST00000598684 ANKRD26Q9UPS8 1709 aa22.31■■□□□ 1.16
CAPN12-210ENST00000598684 KCNA3P22001 575 aa22.3■■□□□ 1.16
CAPN12-210ENST00000598684 FSTL1Q12841 308 aa22.3■■□□□ 1.16
CAPN12-210ENST00000598684 RC3H1Q5TC82 1133 aaKnown RBP22.3■■□□□ 1.16
CAPN12-210ENST00000598684 KCPQ6ZWJ8 1503 aa22.3■■□□□ 1.16
CAPN12-210ENST00000598684 CNTNAP4Q9C0A0 1308 aa22.3■■□□□ 1.16
CAPN12-210ENST00000598684 BRCA1P38398 1863 aaKnown RBP22.29■■□□□ 1.16
CAPN12-210ENST00000598684 RPS6KA4O75676 772 aa22.29■■□□□ 1.16
CAPN12-210ENST00000598684 CAPN15O75808 1086 aa22.29■■□□□ 1.16
CAPN12-210ENST00000598684 PIM2Q9P1W9 311 aa22.29■■□□□ 1.16
CAPN12-210ENST00000598684 KDM2BQ8NHM5 1336 aa22.29■■□□□ 1.16
CAPN12-210ENST00000598684 ZNF316A6NFI3 1004 aaPredicted RBP22.28■■□□□ 1.16
CAPN12-210ENST00000598684 JMYQ8N9B5 988 aa22.28■■□□□ 1.16
CAPN12-210ENST00000598684 RNF181Q9P0P0 153 aa22.28■■□□□ 1.16
CAPN12-210ENST00000598684 COL5A3P25940 1745 aaPredicted RBP22.27■■□□□ 1.16
CAPN12-210ENST00000598684 POLR3GLQ9BT43 218 aa22.27■■□□□ 1.16
CAPN12-210ENST00000598684 POLKQ9UBT6 870 aa22.27■■□□□ 1.16
CAPN12-210ENST00000598684 ZNF831Q5JPB2 1677 aa22.26■■□□□ 1.15
CAPN12-210ENST00000598684 ERVV-2B6SEH9 535 aa22.26■■□□□ 1.15
CAPN12-210ENST00000598684 EIF4A2Q14240 407 aaKnown RBP22.26■■□□□ 1.15
CAPN12-210ENST00000598684 DALRD3Q5D0E6 543 aaKnown RBP22.26■■□□□ 1.15
CAPN12-210ENST00000598684 DCAF5Q96JK2 942 aa22.26■■□□□ 1.15
CAPN12-210ENST00000598684 RRAGCQ9HB90 399 aa22.26■■□□□ 1.15
CAPN12-210ENST00000598684 ARFGEF1Q9Y6D6 1849 aa22.25■■□□□ 1.15
CAPN12-210ENST00000598684 SRP68Q9UHB9 627 aaKnown RBP22.24■■□□□ 1.15
CAPN12-210ENST00000598684 HSP90AB1P08238 724 aaKnown RBP22.23■■□□□ 1.15
CAPN12-210ENST00000598684 TNNT2P45379 298 aaPredicted RBP22.23■■□□□ 1.15
CAPN12-210ENST00000598684 CABP4P57796 275 aa22.23■■□□□ 1.15
CAPN12-210ENST00000598684 PTCD1O75127 700 aaKnown RBP22.22■■□□□ 1.15
CAPN12-210ENST00000598684 CHRNA5P30532 468 aa22.22■■□□□ 1.15
CAPN12-210ENST00000598684 DDR1Q08345 913 aa22.22■■□□□ 1.15
CAPN12-210ENST00000598684 FKBP8Q14318 412 aa22.22■■□□□ 1.15
CAPN12-210ENST00000598684 TNS4Q8IZW8 715 aa22.22■■□□□ 1.15
CAPN12-210ENST00000598684 KDM6AO15550 1401 aaPredicted RBP22.21■■□□□ 1.15
CAPN12-210ENST00000598684 CRKLP46109 303 aaKnown RBP22.2■■□□□ 1.14
CAPN12-210ENST00000598684 SMC1BQ8NDV3 1235 aa22.2■■□□□ 1.14
CAPN12-210ENST00000598684 USP42Q9H9J4 1324 aaKnown RBP22.2■■□□□ 1.14
CAPN12-210ENST00000598684 MYH14Q7Z406 1995 aaKnown RBP22.19■■□□□ 1.14
CAPN12-210ENST00000598684 PLEKHO1Q53GL0 409 aaPredicted RBP22.19■■□□□ 1.14
CAPN12-210ENST00000598684 ZNF530Q6P9A1 599 aaPredicted RBP22.19■■□□□ 1.14
CAPN12-210ENST00000598684 TNRC6CQ9HCJ0 1690 aaKnown RBP22.19■■□□□ 1.14
CAPN12-210ENST00000598684 MTHFSP49914 203 aa22.16■■□□□ 1.14
CAPN12-210ENST00000598684 RASSF7Q02833 373 aa22.16■■□□□ 1.14
CAPN12-210ENST00000598684 POLRMTO00411 1230 aaKnown RBP22.15■■□□□ 1.14
CAPN12-210ENST00000598684 PRELPP51888 382 aa22.14■■□□□ 1.13
CAPN12-210ENST00000598684 AMOTQ4VCS5 1084 aa22.14■■□□□ 1.13
CAPN12-210ENST00000598684 C1orf141Q5JVX7 400 aa22.14■■□□□ 1.13
CAPN12-210ENST00000598684 NFATC2IPQ8NCF5 419 aa22.14■■□□□ 1.13
CAPN12-210ENST00000598684 SBF1O95248 1867 aa22.13■■□□□ 1.13
CAPN12-210ENST00000598684 TJP1Q07157 1748 aa22.12■■□□□ 1.13
CAPN12-210ENST00000598684 TM4SF1P30408 202 aa22.12■■□□□ 1.13
CAPN12-210ENST00000598684 INTS5Q6P9B9 1019 aaKnown RBP22.12■■□□□ 1.13
CAPN12-210ENST00000598684 PANK3Q9H999 370 aa22.12■■□□□ 1.13
CAPN12-210ENST00000598684 ZC3H4Q9UPT8 1303 aaKnown RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms