RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 NUTM2BA6NNL0 878 aaPredicted RBP29.36■■■□□ 2.29
SPTBN4-210ENST00000596900 NUTM2EB1AL46 878 aaPredicted RBP29.36■■■□□ 2.29
SPTBN4-210ENST00000596900 KDM6AO15550 1401 aaPredicted RBP29.36■■■□□ 2.29
SPTBN4-210ENST00000596900 AAMPQ13685 434 aa29.36■■■□□ 2.29
SPTBN4-210ENST00000596900 NUTM2AQ8IVF1 878 aaPredicted RBP29.36■■■□□ 2.29
SPTBN4-210ENST00000596900 CYP27B1O15528 508 aa29.36■■■□□ 2.29
SPTBN4-210ENST00000596900 CLUAP1Q96AJ1 413 aa29.36■■■□□ 2.29
SPTBN4-210ENST00000596900 COG6Q9Y2V7 657 aa29.36■■■□□ 2.29
SPTBN4-210ENST00000596900 NRAPQ86VF7 1730 aa29.35■■■□□ 2.29
SPTBN4-210ENST00000596900 CHMP4AQ9BY43 222 aa29.35■■■□□ 2.29
SPTBN4-210ENST00000596900 USP35Q9P2H5 1018 aa29.34■■■□□ 2.29
SPTBN4-210ENST00000596900 MRC1P22897 1456 aa29.33■■■□□ 2.29
SPTBN4-210ENST00000596900 RLBP1P12271 317 aa29.32■■■□□ 2.28
SPTBN4-210ENST00000596900 SLC52A2Q9HAB3 445 aa29.32■■■□□ 2.28
SPTBN4-210ENST00000596900 HOXB7P09629 217 aa29.31■■■□□ 2.28
SPTBN4-210ENST00000596900 SHANK3Q9BYB0 1731 aa29.31■■■□□ 2.28
SPTBN4-210ENST00000596900 MVPQ14764 893 aaKnown RBP29.31■■■□□ 2.28
SPTBN4-210ENST00000596900 TNNQ9UQP3 1299 aa29.31■■■□□ 2.28
SPTBN4-210ENST00000596900 CACNA1FO60840 1977 aa29.31■■■□□ 2.28
SPTBN4-210ENST00000596900 TCERG1O14776 1098 aaKnown RBP29.3■■■□□ 2.28
SPTBN4-210ENST00000596900 EIF4A1P60842 406 aaKnown RBP29.3■■■□□ 2.28
SPTBN4-210ENST00000596900 CCDC30Q5VVM6 783 aa29.3■■■□□ 2.28
SPTBN4-210ENST00000596900 STK31Q9BXU1 1019 aa29.3■■■□□ 2.28
SPTBN4-210ENST00000596900 API5Q9BZZ5 524 aaKnown RBP29.3■■■□□ 2.28
SPTBN4-210ENST00000596900 WNK3Q9BYP7 1800 aa29.29■■■□□ 2.28
SPTBN4-210ENST00000596900 SPATA31A6Q5VVP1 1343 aa29.29■■■□□ 2.28
SPTBN4-210ENST00000596900 SLIT2O94813 1529 aa29.28■■■□□ 2.28
SPTBN4-210ENST00000596900 DISP2A7MBM2 1401 aa29.28■■■□□ 2.28
SPTBN4-210ENST00000596900 DDX19BQ9UMR2 479 aa29.27■■■□□ 2.28
SPTBN4-210ENST00000596900 PTPRCP08575 1304 aa29.27■■■□□ 2.28
SPTBN4-210ENST00000596900 THRAP3Q9Y2W1 955 aaKnown RBP29.26■■■□□ 2.27
SPTBN4-210ENST00000596900 NKX1-1Q15270 411 aaPredicted RBP29.25■■■□□ 2.27
SPTBN4-210ENST00000596900 CDCA7Q9BWT1 371 aaPredicted RBP29.25■■■□□ 2.27
SPTBN4-210ENST00000596900 SLC4A2P04920 1241 aa29.25■■■□□ 2.27
SPTBN4-210ENST00000596900 CABP4P57796 275 aa29.24■■■□□ 2.27
SPTBN4-210ENST00000596900 ITPRIPQ8IWB1 547 aa29.24■■■□□ 2.27
SPTBN4-210ENST00000596900 NFATC2IPQ8NCF5 419 aa29.24■■■□□ 2.27
SPTBN4-210ENST00000596900 HDGFL1Q5TGJ6 251 aa29.23■■■□□ 2.27
SPTBN4-210ENST00000596900 DDX54Q8TDD1 881 aaKnown RBP29.23■■■□□ 2.27
SPTBN4-210ENST00000596900 CHMP4BQ9H444 224 aaKnown RBP29.23■■■□□ 2.27
SPTBN4-210ENST00000596900 ERVV-2B6SEH9 535 aa29.22■■■□□ 2.27
SPTBN4-210ENST00000596900 ZNF790Q6PG37 636 aa29.22■■■□□ 2.27
SPTBN4-210ENST00000596900 TMEM57Q8N5G2 664 aa29.22■■■□□ 2.27
SPTBN4-210ENST00000596900 ABCC4O15439 1325 aa29.22■■■□□ 2.27
SPTBN4-210ENST00000596900 SPATA31A1Q5TZJ5 1347 aa29.22■■■□□ 2.27
SPTBN4-210ENST00000596900 KCNQ3O43525 872 aa29.21■■■□□ 2.27
SPTBN4-210ENST00000596900 HEG1Q9ULI3 1381 aa29.2■■■□□ 2.27
SPTBN4-210ENST00000596900 TTC5Q8N0Z6 440 aa29.19■■■□□ 2.26
SPTBN4-210ENST00000596900 NGLY1Q96IV0 654 aa29.18■■■□□ 2.26
SPTBN4-210ENST00000596900 EXOC5O00471 708 aa29.17■■■□□ 2.26
SPTBN4-210ENST00000596900 UNC5CLQ8IV45 518 aa29.17■■■□□ 2.26
SPTBN4-210ENST00000596900 C8orf37Q96NL8 207 aa29.17■■■□□ 2.26
SPTBN4-210ENST00000596900 SPATA31A5Q5VU36 1347 aa29.17■■■□□ 2.26
SPTBN4-210ENST00000596900 SPATA31A7Q8IWB4 1347 aa29.17■■■□□ 2.26
SPTBN4-210ENST00000596900 TNS2Q63HR2 1409 aa29.17■■■□□ 2.26
SPTBN4-210ENST00000596900 GIGYF1O75420 1035 aaPredicted RBP29.17■■■□□ 2.26
SPTBN4-210ENST00000596900 HSPA1LP34931 641 aa29.15■■■□□ 2.26
SPTBN4-210ENST00000596900 CENPQQ7L2Z9 268 aaPredicted RBP29.15■■■□□ 2.26
SPTBN4-210ENST00000596900 NECTIN2Q92692 538 aa29.15■■■□□ 2.26
SPTBN4-210ENST00000596900 CCDC9Q9Y3X0 531 aaKnown RBP29.15■■■□□ 2.26
SPTBN4-210ENST00000596900 EIF2S2P20042 333 aaKnown RBP29.14■■■□□ 2.26
SPTBN4-210ENST00000596900 SLC39A6Q13433 755 aa29.14■■■□□ 2.26
SPTBN4-210ENST00000596900 RGS12O14924 1447 aa29.14■■■□□ 2.25
SPTBN4-210ENST00000596900 LRP6O75581 1613 aa29.13■■■□□ 2.25
SPTBN4-210ENST00000596900 FLIIQ13045 1269 aa29.12■■■□□ 2.25
SPTBN4-210ENST00000596900 BARGINQ6ZT62 677 aa29.12■■■□□ 2.25
SPTBN4-210ENST00000596900 FNBP4Q8N3X1 1017 aaPredicted RBP29.12■■■□□ 2.25
SPTBN4-210ENST00000596900 FMNL2Q96PY5 1086 aa29.12■■■□□ 2.25
SPTBN4-210ENST00000596900 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.12■■■□□ 2.25
SPTBN4-210ENST00000596900 TOGARAM1Q9Y4F4 1720 aa29.12■■■□□ 2.25
SPTBN4-210ENST00000596900 DBF4Q9UBU7 674 aaPredicted RBP29.11■■■□□ 2.25
SPTBN4-210ENST00000596900 KDM2BQ8NHM5 1336 aa29.11■■■□□ 2.25
SPTBN4-210ENST00000596900 INTS3Q68E01 1043 aaKnown RBP29.1■■■□□ 2.25
SPTBN4-210ENST00000596900 PAPPAQ13219 1627 aa29.1■■■□□ 2.25
SPTBN4-210ENST00000596900 FKBP5Q13451 457 aaPredicted RBP29.1■■■□□ 2.25
SPTBN4-210ENST00000596900 G2E3Q7L622 706 aa29.1■■■□□ 2.25
SPTBN4-210ENST00000596900 BCL9LQ86UU0 1499 aa29.1■■■□□ 2.25
SPTBN4-210ENST00000596900 VPS72Q15906 364 aa29.09■■■□□ 2.25
SPTBN4-210ENST00000596900 DDB1Q16531 1140 aa29.09■■■□□ 2.25
SPTBN4-210ENST00000596900 ZNF496Q96IT1 587 aaPredicted RBP29.08■■■□□ 2.25
SPTBN4-210ENST00000596900 ZBTB40Q9NUA8 1239 aa29.08■■■□□ 2.25
SPTBN4-210ENST00000596900 UBR2Q8IWV8 1755 aa29.08■■■□□ 2.25
SPTBN4-210ENST00000596900 C5P01031 1676 aa29.08■■■□□ 2.25
SPTBN4-210ENST00000596900 SNRPA1P09661 255 aaKnown RBP29.08■■■□□ 2.25
SPTBN4-210ENST00000596900 TMOD3Q9NYL9 352 aa29.08■■■□□ 2.25
SPTBN4-210ENST00000596900 CHPF2Q9P2E5 772 aa29.08■■■□□ 2.25
SPTBN4-210ENST00000596900 MEX3CQ5U5Q3 659 aaKnown RBP29.07■■■□□ 2.24
SPTBN4-210ENST00000596900 ZBTB7BO15156 539 aaPredicted RBP29.06■■■□□ 2.24
SPTBN4-210ENST00000596900 LAMB4A4D0S4 1761 aa29.05■■■□□ 2.24
SPTBN4-210ENST00000596900 CCT4P50991 539 aaKnown RBP29.05■■■□□ 2.24
SPTBN4-210ENST00000596900 PXDNLA1KZ92 1463 aa29.05■■■□□ 2.24
SPTBN4-210ENST00000596900 ITGB4P16144 1822 aa29.05■■■□□ 2.24
SPTBN4-210ENST00000596900 USP21Q9UK80 565 aa29.04■■■□□ 2.24
SPTBN4-210ENST00000596900 PCDHB15Q9Y5E8 787 aa29.04■■■□□ 2.24
SPTBN4-210ENST00000596900 RWDD1Q9H446 243 aaPredicted RBP29.04■■■□□ 2.24
SPTBN4-210ENST00000596900 N4BP2Q86UW6 1770 aaPredicted RBP29.03■■■□□ 2.24
SPTBN4-210ENST00000596900 HYPKQ9NX55 129 aa29.02■■■□□ 2.24
SPTBN4-210ENST00000596900 PRAMEF22A3QJZ6 481 aa29.02■■■□□ 2.24
SPTBN4-210ENST00000596900 SLC4A10Q6U841 1118 aa29.01■■■□□ 2.23
SPTBN4-210ENST00000596900 PHAXQ9H814 394 aaKnown RBP29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms