RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 TATP17735 454 aaPredicted RBP17.03■□□□□ 0.32
SHKBP1-209ENST00000595803 CALD1Q05682 793 aaKnown RBP17.03■□□□□ 0.32
SHKBP1-209ENST00000595803 RTF1Q92541 710 aaKnown RBP17.02■□□□□ 0.32
SHKBP1-209ENST00000595803 CARD10Q9BWT7 1032 aa17.02■□□□□ 0.32
SHKBP1-209ENST00000595803 PAPPAQ13219 1627 aa17.02■□□□□ 0.31
SHKBP1-209ENST00000595803 WNK3Q9BYP7 1800 aa17.01■□□□□ 0.31
SHKBP1-209ENST00000595803 HTATSF1O43719 755 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-209ENST00000595803 DDB1Q16531 1140 aa17.01■□□□□ 0.31
SHKBP1-209ENST00000595803 BCL9O00512 1426 aa17.01■□□□□ 0.31
SHKBP1-209ENST00000595803 ATP10DQ9P241 1426 aa17.01■□□□□ 0.31
SHKBP1-209ENST00000595803 GNAT3A8MTJ3 354 aa17■□□□□ 0.31
SHKBP1-209ENST00000595803 NCAPD2Q15021 1401 aa17■□□□□ 0.31
SHKBP1-209ENST00000595803 KLHL34Q8N239 644 aa17■□□□□ 0.31
SHKBP1-209ENST00000595803 MYH16Q9H6N6 1097 aa17■□□□□ 0.31
SHKBP1-209ENST00000595803 IL16Q14005 1332 aa16.99■□□□□ 0.31
SHKBP1-209ENST00000595803 TRMT2AQ8IZ69 625 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-209ENST00000595803 SPG7Q9UQ90 795 aa16.99■□□□□ 0.31
SHKBP1-209ENST00000595803 FAM208AQ9UK61 1670 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-209ENST00000595803 DUSP27Q5VZP5 1158 aa16.98■□□□□ 0.31
SHKBP1-209ENST00000595803 ZNF530Q6P9A1 599 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-209ENST00000595803 MARCH10Q8NA82 808 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-209ENST00000595803 SPINK5Q9NQ38 1064 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-209ENST00000595803 LAS1LQ9Y4W2 734 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-209ENST00000595803 DCTN1Q14203 1278 aa16.97■□□□□ 0.31
SHKBP1-209ENST00000595803 AKAP4Q5JQC9 854 aa16.97■□□□□ 0.31
SHKBP1-209ENST00000595803 C1orf141Q5JVX7 400 aa16.97■□□□□ 0.31
SHKBP1-209ENST00000595803 THUMPD2Q9BTF0 503 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-209ENST00000595803 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.97■□□□□ 0.31
SHKBP1-209ENST00000595803 IL2RBP14784 551 aa16.96■□□□□ 0.31
SHKBP1-209ENST00000595803 GNAI1P63096 354 aa16.96■□□□□ 0.31
SHKBP1-209ENST00000595803 MCM10Q7L590 875 aa16.96■□□□□ 0.31
SHKBP1-209ENST00000595803 NLGN2Q8NFZ4 835 aa16.95■□□□□ 0.3
SHKBP1-209ENST00000595803 GPBP1L1Q9HC44 474 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-209ENST00000595803 DLG5Q8TDM6 1919 aa16.94■□□□□ 0.3
SHKBP1-209ENST00000595803 YBX3P16989 372 aaKnown RBP eCLIP16.94■□□□□ 0.3
SHKBP1-209ENST00000595803 IFT57Q9NWB7 429 aa16.94■□□□□ 0.3
SHKBP1-209ENST00000595803 ZCRB1Q8TBF4 217 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-209ENST00000595803 SUPT16HQ9Y5B9 1047 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-209ENST00000595803 COL24A1Q17RW2 1714 aa16.93■□□□□ 0.3
SHKBP1-209ENST00000595803 PLEKHG2Q9H7P9 1386 aa16.92■□□□□ 0.3
SHKBP1-209ENST00000595803 NHSQ6T4R5 1651 aa16.92■□□□□ 0.3
SHKBP1-209ENST00000595803 ZNF827Q17R98 1081 aa16.92■□□□□ 0.3
SHKBP1-209ENST00000595803 IFNL2Q8IZJ0 200 aa16.92■□□□□ 0.3
SHKBP1-209ENST00000595803 IL17REQ8NFR9 667 aa16.92■□□□□ 0.3
SHKBP1-209ENST00000595803 CFAP44Q96MT7 982 aa16.92■□□□□ 0.3
SHKBP1-209ENST00000595803 RCAN3Q9UKA8 241 aa16.92■□□□□ 0.3
SHKBP1-209ENST00000595803 ADCY9O60503 1353 aa16.9■□□□□ 0.3
SHKBP1-209ENST00000595803 GRIN3BO60391 1043 aa16.9■□□□□ 0.3
SHKBP1-209ENST00000595803 CAPN15O75808 1086 aa16.9■□□□□ 0.3
SHKBP1-209ENST00000595803 HSP90AB1P08238 724 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-209ENST00000595803 ZNF853P0CG23 659 aa16.9■□□□□ 0.3
SHKBP1-209ENST00000595803 POLD1P28340 1107 aa16.9■□□□□ 0.3
SHKBP1-209ENST00000595803 MPRIPQ6WCQ1 1025 aa16.9■□□□□ 0.3
SHKBP1-209ENST00000595803 TSR2Q969E8 191 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-209ENST00000595803 MEGF6O75095 1541 aa16.9■□□□□ 0.3
SHKBP1-209ENST00000595803 RNMTO43148 476 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-209ENST00000595803 PHKG2P15735 406 aa16.89■□□□□ 0.29
SHKBP1-209ENST00000595803 TAF7Q15545 349 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-209ENST00000595803 ZNF526Q8TF50 670 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-209ENST00000595803 CDCA7Q9BWT1 371 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-209ENST00000595803 LGR6Q9HBX8 967 aa16.89■□□□□ 0.29
SHKBP1-209ENST00000595803 FANCIQ9NVI1 1328 aa16.89■□□□□ 0.29
SHKBP1-209ENST00000595803 QSER1Q2KHR3 1735 aa16.88■□□□□ 0.29
SHKBP1-209ENST00000595803 EXOC5O00471 708 aa16.88■□□□□ 0.29
SHKBP1-209ENST00000595803 CHL1O00533 1208 aa16.88■□□□□ 0.29
SHKBP1-209ENST00000595803 EXOSC9Q06265 439 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-209ENST00000595803 MBIPQ9NS73 344 aa16.88■□□□□ 0.29
SHKBP1-209ENST00000595803 TEFQ10587 303 aa16.87■□□□□ 0.29
SHKBP1-209ENST00000595803 DDX54Q8TDD1 881 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-209ENST00000595803 BABAM1Q9NWV8 329 aa16.87■□□□□ 0.29
SHKBP1-209ENST00000595803 CYP27B1O15528 508 aa16.86■□□□□ 0.29
SHKBP1-209ENST00000595803 TSPYL4Q9UJ04 414 aa16.86■□□□□ 0.29
SHKBP1-209ENST00000595803 PCDH11XQ9BZA7 1347 aa16.86■□□□□ 0.29
SHKBP1-209ENST00000595803 PCDH11YQ9BZA8 1340 aa16.86■□□□□ 0.29
SHKBP1-209ENST00000595803 TNS2Q63HR2 1409 aa16.86■□□□□ 0.29
SHKBP1-209ENST00000595803 NEFLP07196 543 aa16.85■□□□□ 0.29
SHKBP1-209ENST00000595803 CT47B1P0C2W7 299 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-209ENST00000595803 SLC16A10Q8TF71 515 aa16.85■□□□□ 0.29
SHKBP1-209ENST00000595803 DCAF5Q96JK2 942 aa16.85■□□□□ 0.29
SHKBP1-209ENST00000595803 MIS18AQ9NYP9 233 aa16.85■□□□□ 0.29
SHKBP1-209ENST00000595803 BTAF1O14981 1849 aa16.84■□□□□ 0.29
SHKBP1-209ENST00000595803 COL13A1Q5TAT6 717 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-209ENST00000595803 TUBGCP6Q96RT7 1819 aa16.84■□□□□ 0.29
SHKBP1-209ENST00000595803 APLP1P51693 650 aa16.83■□□□□ 0.28
SHKBP1-209ENST00000595803 CEMIPQ8WUJ3 1361 aa16.83■□□□□ 0.28
SHKBP1-209ENST00000595803 LRRC4BQ9NT99 713 aa16.83■□□□□ 0.28
SHKBP1-209ENST00000595803 PNPLA7Q6ZV29 1317 aa16.82■□□□□ 0.28
SHKBP1-209ENST00000595803 BTBD11A6QL63 1104 aa16.82■□□□□ 0.28
SHKBP1-209ENST00000595803 NKX1-1Q15270 411 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-209ENST00000595803 ACSBG1Q96GR2 724 aa16.82■□□□□ 0.28
SHKBP1-209ENST00000595803 CABP4P57796 275 aa16.81■□□□□ 0.28
SHKBP1-209ENST00000595803 DNAJC5GQ8N7S2 189 aa16.81■□□□□ 0.28
SHKBP1-209ENST00000595803 AKT1S1Q96B36 256 aa16.81■□□□□ 0.28
SHKBP1-209ENST00000595803 PKD1L3Q7Z443 1732 aa16.81■□□□□ 0.28
SHKBP1-209ENST00000595803 ELL2O00472 640 aaPredicted RBP16.8■□□□□ 0.28
SHKBP1-209ENST00000595803 TWISTNBQ3B726 338 aaPredicted RBP16.8■□□□□ 0.28
SHKBP1-209ENST00000595803 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.8■□□□□ 0.28
SHKBP1-209ENST00000595803 C8orf58Q8NAV2 365 aa16.8■□□□□ 0.28
SHKBP1-209ENST00000595803 SLC52A2Q9HAB3 445 aa16.8■□□□□ 0.28
SHKBP1-209ENST00000595803 GTF3C3Q9Y5Q9 886 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms