RNA–Protein interactions for RNA: ENST00000595564.5

PAF1-204, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PAF1, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-204ENST00000595564 SPG7Q9UQ90 795 aa18.37■□□□□ 0.53
PAF1-204ENST00000595564 MEGF6O75095 1541 aa18.37■□□□□ 0.53
PAF1-204ENST00000595564 KDM3BQ7LBC6 1761 aa18.37■□□□□ 0.53
PAF1-204ENST00000595564 KCNQ3O43525 872 aa18.36■□□□□ 0.53
PAF1-204ENST00000595564 FAM161AQ3B820 660 aa18.35■□□□□ 0.53
PAF1-204ENST00000595564 HDGFL1Q5TGJ6 251 aa18.35■□□□□ 0.53
PAF1-204ENST00000595564 VIRMAQ69YN4 1812 aaKnown RBP18.35■□□□□ 0.53
PAF1-204ENST00000595564 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.35■□□□□ 0.53
PAF1-204ENST00000595564 ABCA3Q99758 1704 aa18.34■□□□□ 0.53
PAF1-204ENST00000595564 FLIIQ13045 1269 aa18.34■□□□□ 0.53
PAF1-204ENST00000595564 SMC5Q8IY18 1101 aa18.34■□□□□ 0.53
PAF1-204ENST00000595564 HOXB7P09629 217 aa18.33■□□□□ 0.53
PAF1-204ENST00000595564 PHKG2P15735 406 aa18.33■□□□□ 0.53
PAF1-204ENST00000595564 PLEKHG2Q9H7P9 1386 aa18.33■□□□□ 0.52
PAF1-204ENST00000595564 WDR17Q8IZU2 1322 aa18.33■□□□□ 0.52
PAF1-204ENST00000595564 F6X3S4 739 aa18.33■□□□□ 0.52
PAF1-204ENST00000595564 SLC4A10Q6U841 1118 aa18.33■□□□□ 0.52
PAF1-204ENST00000595564 ADAMTS7Q9UKP4 1686 aa18.32■□□□□ 0.52
PAF1-204ENST00000595564 EIF2S2P20042 333 aaKnown RBP18.32■□□□□ 0.52
PAF1-204ENST00000595564 FKBP5Q13451 457 aaPredicted RBP18.32■□□□□ 0.52
PAF1-204ENST00000595564 C8orf34Q49A92 452 aa18.32■□□□□ 0.52
PAF1-204ENST00000595564 TOM1L2Q6ZVM7 507 aa18.32■□□□□ 0.52
PAF1-204ENST00000595564 IFNL2Q8IZJ0 200 aa18.32■□□□□ 0.52
PAF1-204ENST00000595564 CCT4P50991 539 aaKnown RBP18.31■□□□□ 0.52
PAF1-204ENST00000595564 COL5A2P05997 1499 aaPredicted RBP18.31■□□□□ 0.52
PAF1-204ENST00000595564 ANP32AP39687 249 aaKnown RBP18.3■□□□□ 0.52
PAF1-204ENST00000595564 CHMP4AQ9BY43 222 aa18.3■□□□□ 0.52
PAF1-204ENST00000595564 KDM6AO15550 1401 aaPredicted RBP18.3■□□□□ 0.52
PAF1-204ENST00000595564 SIRT2Q8IXJ6 389 aa18.3■□□□□ 0.52
PAF1-204ENST00000595564 SIPA1L3O60292 1781 aaPredicted RBP18.3■□□□□ 0.52
PAF1-204ENST00000595564 UBAP1LF5GYI3 381 aa18.29■□□□□ 0.52
PAF1-204ENST00000595564 NPM2Q86SE8 214 aaKnown RBP18.29■□□□□ 0.52
PAF1-204ENST00000595564 CACNA1FO60840 1977 aa18.28■□□□□ 0.52
PAF1-204ENST00000595564 GCC1Q96CN9 775 aa18.28■□□□□ 0.52
PAF1-204ENST00000595564 MEIS3Q99687 375 aa18.28■□□□□ 0.52
PAF1-204ENST00000595564 SLC52A2Q9HAB3 445 aa18.28■□□□□ 0.52
PAF1-204ENST00000595564 ROBO1Q9Y6N7 1651 aa18.28■□□□□ 0.52
PAF1-204ENST00000595564 PKD1L3Q7Z443 1732 aa18.28■□□□□ 0.52
PAF1-204ENST00000595564 SCN11AQ9UI33 1791 aa18.28■□□□□ 0.52
PAF1-204ENST00000595564 CYP27B1O15528 508 aa18.28■□□□□ 0.52
PAF1-204ENST00000595564 NUCB1Q02818 461 aa18.28■□□□□ 0.52
PAF1-204ENST00000595564 STRN4Q9NRL3 753 aa18.28■□□□□ 0.52
PAF1-204ENST00000595564 EVA1CP58658 441 aa18.27■□□□□ 0.52
PAF1-204ENST00000595564 DCAF5Q96JK2 942 aa18.27■□□□□ 0.52
PAF1-204ENST00000595564 PHAXQ9H814 394 aaKnown RBP18.27■□□□□ 0.52
PAF1-204ENST00000595564 CHPF2Q9P2E5 772 aa18.27■□□□□ 0.52
PAF1-204ENST00000595564 GIGYF1O75420 1035 aaPredicted RBP18.26■□□□□ 0.51
PAF1-204ENST00000595564 HSP90AB1P08238 724 aaKnown RBP18.26■□□□□ 0.51
PAF1-204ENST00000595564 HEG1Q9ULI3 1381 aa18.26■□□□□ 0.51
PAF1-204ENST00000595564 NFATC2IPQ8NCF5 419 aa18.26■□□□□ 0.51
PAF1-204ENST00000595564 CARD10Q9BWT7 1032 aa18.26■□□□□ 0.51
PAF1-204ENST00000595564 PARP4Q9UKK3 1724 aaKnown RBP18.25■□□□□ 0.51
PAF1-204ENST00000595564 LARP1Q6PKG0 1096 aaKnown RBP18.25■□□□□ 0.51
PAF1-204ENST00000595564 CHD1LQ86WJ1 897 aa18.25■□□□□ 0.51
PAF1-204ENST00000595564 ANKRD44Q8N8A2 993 aa18.25■□□□□ 0.51
PAF1-204ENST00000595564 ATP10DQ9P241 1426 aa18.25■□□□□ 0.51
PAF1-204ENST00000595564 MSH5O43196 834 aa18.24■□□□□ 0.51
PAF1-204ENST00000595564 SLC39A6Q13433 755 aa18.24■□□□□ 0.51
PAF1-204ENST00000595564 CEP85Q6P2H3 762 aa18.24■□□□□ 0.51
PAF1-204ENST00000595564 RPAP2Q8IXW5 612 aaPredicted RBP18.24■□□□□ 0.51
PAF1-204ENST00000595564 LNPKQ9C0E8 428 aa18.24■□□□□ 0.51
PAF1-204ENST00000595564 AHDC1Q5TGY3 1603 aaPredicted RBP18.24■□□□□ 0.51
PAF1-204ENST00000595564 ANKRD45Q5TZF3 282 aa18.23■□□□□ 0.51
PAF1-204ENST00000595564 ZNF790Q6PG37 636 aa18.23■□□□□ 0.51
PAF1-204ENST00000595564 ZCRB1Q8TBF4 217 aaKnown RBP18.23■□□□□ 0.51
PAF1-204ENST00000595564 PXDNLA1KZ92 1463 aa18.23■□□□□ 0.51
PAF1-204ENST00000595564 PRAMEF22A3QJZ6 481 aa18.23■□□□□ 0.51
PAF1-204ENST00000595564 IL2RBP14784 551 aa18.23■□□□□ 0.51
PAF1-204ENST00000595564 DBF4Q9UBU7 674 aaPredicted RBP18.23■□□□□ 0.51
PAF1-204ENST00000595564 PCDH11XQ9BZA7 1347 aa18.23■□□□□ 0.51
PAF1-204ENST00000595564 PCDH11YQ9BZA8 1340 aa18.23■□□□□ 0.51
PAF1-204ENST00000595564 ANXA1P04083 346 aa18.22■□□□□ 0.51
PAF1-204ENST00000595564 MRC1P22897 1456 aa18.22■□□□□ 0.51
PAF1-204ENST00000595564 CABP4P57796 275 aa18.21■□□□□ 0.51
PAF1-204ENST00000595564 DCTPP1Q9H773 170 aa18.21■□□□□ 0.51
PAF1-204ENST00000595564 BTG4Q9NY30 223 aa18.21■□□□□ 0.51
PAF1-204ENST00000595564 GNAI2P04899 355 aa18.2■□□□□ 0.5
PAF1-204ENST00000595564 GNAI3P08754 354 aa18.2■□□□□ 0.5
PAF1-204ENST00000595564 IPO9Q96P70 1041 aaKnown RBP18.2■□□□□ 0.5
PAF1-204ENST00000595564 TTC5Q8N0Z6 440 aa18.19■□□□□ 0.5
PAF1-204ENST00000595564 N4BP2Q86UW6 1770 aaPredicted RBP18.19■□□□□ 0.5
PAF1-204ENST00000595564 TOM1O60784 492 aa18.19■□□□□ 0.5
PAF1-204ENST00000595564 PROSER3Q2NL68 480 aa18.19■□□□□ 0.5
PAF1-204ENST00000595564 USP35Q9P2H5 1018 aa18.19■□□□□ 0.5
PAF1-204ENST00000595564 PI4KAP2A4QPH2 592 aa18.18■□□□□ 0.5
PAF1-204ENST00000595564 PIP4K2BP78356 416 aa18.18■□□□□ 0.5
PAF1-204ENST00000595564 PI4KAP1Q8N8J0 262 aa18.18■□□□□ 0.5
PAF1-204ENST00000595564 DNAAF4Q8WXU2 420 aa18.18■□□□□ 0.5
PAF1-204ENST00000595564 SRCIN1Q9C0H9 1055 aa18.18■□□□□ 0.5
PAF1-204ENST00000595564 COL22A1Q8NFW1 1626 aaPredicted RBP18.18■□□□□ 0.5
PAF1-204ENST00000595564 HMMRO75330 724 aa18.17■□□□□ 0.5
PAF1-204ENST00000595564 ZNF496Q96IT1 587 aaPredicted RBP18.17■□□□□ 0.5
PAF1-204ENST00000595564 HYPKQ9NX55 129 aa18.17■□□□□ 0.5
PAF1-204ENST00000595564 COL14A1Q05707 1796 aaKnown RBP18.17■□□□□ 0.5
PAF1-204ENST00000595564 DDX54Q8TDD1 881 aaKnown RBP18.16■□□□□ 0.5
PAF1-204ENST00000595564 ADCY9O60503 1353 aa18.16■□□□□ 0.5
PAF1-204ENST00000595564 FMNL2Q96PY5 1086 aa18.16■□□□□ 0.5
PAF1-204ENST00000595564 USP44Q9H0E7 712 aa18.16■□□□□ 0.5
PAF1-204ENST00000595564 DDX21Q9NR30 783 aaKnown RBP eCLIP18.16■□□□□ 0.5
PAF1-204ENST00000595564 C5P01031 1676 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms