RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 CANXP27824 592 aaKnown RBP19.5■□□□□ 0.71
VRK3-207ENST00000594092 FNBP4Q8N3X1 1017 aaPredicted RBP19.49■□□□□ 0.71
VRK3-207ENST00000594092 EXOC6Q8TAG9 804 aa19.49■□□□□ 0.71
VRK3-207ENST00000594092 SLC52A2Q9HAB3 445 aa19.49■□□□□ 0.71
VRK3-207ENST00000594092 THRAP3Q9Y2W1 955 aaKnown RBP19.49■□□□□ 0.71
VRK3-207ENST00000594092 MRC1P22897 1456 aa19.49■□□□□ 0.71
VRK3-207ENST00000594092 BRPF1P55201 1214 aaPredicted RBP19.48■□□□□ 0.71
VRK3-207ENST00000594092 NKX1-1Q15270 411 aaPredicted RBP19.48■□□□□ 0.71
VRK3-207ENST00000594092 DDX54Q8TDD1 881 aaKnown RBP19.48■□□□□ 0.71
VRK3-207ENST00000594092 PELP1Q8IZL8 1130 aaKnown RBP19.48■□□□□ 0.71
VRK3-207ENST00000594092 CRBNQ96SW2 442 aa19.48■□□□□ 0.71
VRK3-207ENST00000594092 KCNQ3O43525 872 aa19.47■□□□□ 0.71
VRK3-207ENST00000594092 EIF4A1P60842 406 aaKnown RBP19.47■□□□□ 0.71
VRK3-207ENST00000594092 PDE3AQ14432 1141 aa19.47■□□□□ 0.71
VRK3-207ENST00000594092 MRPL50Q8N5N7 158 aaKnown RBP19.47■□□□□ 0.71
VRK3-207ENST00000594092 CDCA7Q9BWT1 371 aaPredicted RBP19.46■□□□□ 0.71
VRK3-207ENST00000594092 CCDC9Q9Y3X0 531 aaKnown RBP19.46■□□□□ 0.71
VRK3-207ENST00000594092 KIF16BQ96L93 1317 aa19.46■□□□□ 0.71
VRK3-207ENST00000594092 TCERG1O14776 1098 aaKnown RBP19.46■□□□□ 0.71
VRK3-207ENST00000594092 ZKSCAN2Q63HK3 967 aa19.46■□□□□ 0.71
VRK3-207ENST00000594092 NFATC2IPQ8NCF5 419 aa19.46■□□□□ 0.71
VRK3-207ENST00000594092 NOB1Q9ULX3 412 aaKnown RBP19.46■□□□□ 0.71
VRK3-207ENST00000594092 VPS72Q15906 364 aa19.45■□□□□ 0.7
VRK3-207ENST00000594092 TNNQ9UQP3 1299 aa19.45■□□□□ 0.7
VRK3-207ENST00000594092 SOS1Q07889 1333 aaPredicted RBP19.45■□□□□ 0.7
VRK3-207ENST00000594092 EXOC5O00471 708 aa19.44■□□□□ 0.7
VRK3-207ENST00000594092 MEX3CQ5U5Q3 659 aaKnown RBP19.44■□□□□ 0.7
VRK3-207ENST00000594092 TNS2Q63HR2 1409 aa19.44■□□□□ 0.7
VRK3-207ENST00000594092 ERVV-2B6SEH9 535 aa19.44■□□□□ 0.7
VRK3-207ENST00000594092 CABP4P57796 275 aa19.44■□□□□ 0.7
VRK3-207ENST00000594092 BARGINQ6ZT62 677 aa19.44■□□□□ 0.7
VRK3-207ENST00000594092 PANK1Q8TE04 598 aa19.44■□□□□ 0.7
VRK3-207ENST00000594092 USP21Q9UK80 565 aa19.44■□□□□ 0.7
VRK3-207ENST00000594092 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.43■□□□□ 0.7
VRK3-207ENST00000594092 IPO8O15397 1037 aaKnown RBP19.42■□□□□ 0.7
VRK3-207ENST00000594092 RLBP1P12271 317 aa19.42■□□□□ 0.7
VRK3-207ENST00000594092 TRIM27P14373 513 aa19.42■□□□□ 0.7
VRK3-207ENST00000594092 ATF7IPQ6VMQ6 1270 aa19.42■□□□□ 0.7
VRK3-207ENST00000594092 SLC39A6Q13433 755 aa19.41■□□□□ 0.7
VRK3-207ENST00000594092 ZNF790Q6PG37 636 aa19.41■□□□□ 0.7
VRK3-207ENST00000594092 HEG1Q9ULI3 1381 aa19.41■□□□□ 0.7
VRK3-207ENST00000594092 HOXB7P09629 217 aa19.41■□□□□ 0.7
VRK3-207ENST00000594092 B4GALNT3Q6L9W6 998 aa19.41■□□□□ 0.7
VRK3-207ENST00000594092 CLUAP1Q96AJ1 413 aa19.41■□□□□ 0.7
VRK3-207ENST00000594092 DZIP1LQ8IYY4 767 aaKnown RBP19.4■□□□□ 0.7
VRK3-207ENST00000594092 ARHGAP45Q92619 1136 aa19.4■□□□□ 0.7
VRK3-207ENST00000594092 TOGARAM1Q9Y4F4 1720 aa19.4■□□□□ 0.7
VRK3-207ENST00000594092 MS4A1P11836 297 aa19.39■□□□□ 0.7
VRK3-207ENST00000594092 DDB1Q16531 1140 aa19.39■□□□□ 0.7
VRK3-207ENST00000594092 CCDC136Q96JN2 1154 aa19.39■□□□□ 0.7
VRK3-207ENST00000594092 AFF2P51816 1311 aa19.39■□□□□ 0.69
VRK3-207ENST00000594092 CCDC30Q5VVM6 783 aa19.39■□□□□ 0.69
VRK3-207ENST00000594092 FTSJ3Q8IY81 847 aaKnown RBP19.39■□□□□ 0.69
VRK3-207ENST00000594092 COG6Q9Y2V7 657 aa19.39■□□□□ 0.69
VRK3-207ENST00000594092 GIGYF1O75420 1035 aaPredicted RBP19.37■□□□□ 0.69
VRK3-207ENST00000594092 SLC4A2P04920 1241 aa19.37■□□□□ 0.69
VRK3-207ENST00000594092 FAM98CQ17RN3 349 aaKnown RBP19.37■□□□□ 0.69
VRK3-207ENST00000594092 HDGFL1Q5TGJ6 251 aa19.37■□□□□ 0.69
VRK3-207ENST00000594092 NECTIN2Q92692 538 aa19.37■□□□□ 0.69
VRK3-207ENST00000594092 TTC5Q8N0Z6 440 aa19.37■□□□□ 0.69
VRK3-207ENST00000594092 STK31Q9BXU1 1019 aa19.37■□□□□ 0.69
VRK3-207ENST00000594092 ZNF496Q96IT1 587 aaPredicted RBP19.35■□□□□ 0.69
VRK3-207ENST00000594092 EIF2S2P20042 333 aaKnown RBP19.35■□□□□ 0.69
VRK3-207ENST00000594092 CHMP4AQ9BY43 222 aa19.35■□□□□ 0.69
VRK3-207ENST00000594092 API5Q9BZZ5 524 aaKnown RBP19.35■□□□□ 0.69
VRK3-207ENST00000594092 PAPPAQ13219 1627 aa19.34■□□□□ 0.69
VRK3-207ENST00000594092 PRAMEF22A3QJZ6 481 aa19.34■□□□□ 0.69
VRK3-207ENST00000594092 MVPQ14764 893 aaKnown RBP19.34■□□□□ 0.69
VRK3-207ENST00000594092 MARCH10Q8NA82 808 aaPredicted RBP19.34■□□□□ 0.69
VRK3-207ENST00000594092 TMOD3Q9NYL9 352 aa19.34■□□□□ 0.69
VRK3-207ENST00000594092 PTPRCP08575 1304 aa19.33■□□□□ 0.69
VRK3-207ENST00000594092 ATRNO75882 1429 aa19.33■□□□□ 0.69
VRK3-207ENST00000594092 G2E3Q7L622 706 aa19.33■□□□□ 0.69
VRK3-207ENST00000594092 TMEM57Q8N5G2 664 aa19.33■□□□□ 0.69
VRK3-207ENST00000594092 FMNL2Q96PY5 1086 aa19.33■□□□□ 0.69
VRK3-207ENST00000594092 CACNA1FO60840 1977 aa19.33■□□□□ 0.69
VRK3-207ENST00000594092 ITGB4P16144 1822 aa19.32■□□□□ 0.68
VRK3-207ENST00000594092 RGS12O14924 1447 aa19.32■□□□□ 0.68
VRK3-207ENST00000594092 ABCC4O15439 1325 aa19.32■□□□□ 0.68
VRK3-207ENST00000594092 GLI3P10071 1580 aa19.32■□□□□ 0.68
VRK3-207ENST00000594092 PIGBQ92521 554 aa19.32■□□□□ 0.68
VRK3-207ENST00000594092 GJD4Q96KN9 370 aaPredicted RBP19.32■□□□□ 0.68
VRK3-207ENST00000594092 C5P01031 1676 aa19.31■□□□□ 0.68
VRK3-207ENST00000594092 UBR2Q8IWV8 1755 aa19.31■□□□□ 0.68
VRK3-207ENST00000594092 ITPRIPQ8IWB1 547 aa19.31■□□□□ 0.68
VRK3-207ENST00000594092 TRPC5Q9UL62 973 aaPredicted RBP19.31■□□□□ 0.68
VRK3-207ENST00000594092 KCPQ6ZWJ8 1503 aa19.3■□□□□ 0.68
VRK3-207ENST00000594092 THSD7AQ9UPZ6 1657 aa19.3■□□□□ 0.68
VRK3-207ENST00000594092 SNRPA1P09661 255 aaKnown RBP19.3■□□□□ 0.68
VRK3-207ENST00000594092 CHPF2Q9P2E5 772 aa19.3■□□□□ 0.68
VRK3-207ENST00000594092 BCL9O00512 1426 aa19.3■□□□□ 0.68
VRK3-207ENST00000594092 FLIIQ13045 1269 aa19.3■□□□□ 0.68
VRK3-207ENST00000594092 DOT1LQ8TEK3 1739 aa19.29■□□□□ 0.68
VRK3-207ENST00000594092 DDX19BQ9UMR2 479 aa19.29■□□□□ 0.68
VRK3-207ENST00000594092 PRIM1P49642 420 aaKnown RBP19.28■□□□□ 0.68
VRK3-207ENST00000594092 DBF4Q9UBU7 674 aaPredicted RBP19.28■□□□□ 0.68
VRK3-207ENST00000594092 A0A0G2JS52 829 aa19.28■□□□□ 0.68
VRK3-207ENST00000594092 MYT1Q01538 1121 aa19.28■□□□□ 0.68
VRK3-207ENST00000594092 AAMPQ13685 434 aa19.28■□□□□ 0.68
VRK3-207ENST00000594092 PHAXQ9H814 394 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms