RNA–Protein interactions for RNA: ENST00000593742.1

SOD3-202, Transcript of superoxide dismutase 3, humanhuman

TSL 5

Gene SOD3, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3-202ENST00000593742 HSP90AB1P08238 724 aaKnown RBP16.22■□□□□ 0.19
SOD3-202ENST00000593742 POLD1P28340 1107 aa16.22■□□□□ 0.19
SOD3-202ENST00000593742 MSL1Q68DK7 614 aa16.22■□□□□ 0.19
SOD3-202ENST00000593742 AK7Q96M32 723 aa16.22■□□□□ 0.19
SOD3-202ENST00000593742 LOC102724428A0A0B4J2F2 783 aa16.21■□□□□ 0.19
SOD3-202ENST00000593742 SIK1P57059 783 aa16.21■□□□□ 0.19
SOD3-202ENST00000593742 COL23A1Q86Y22 540 aaPredicted RBP16.21■□□□□ 0.19
SOD3-202ENST00000593742 SGIP1Q9BQI5 828 aa16.21■□□□□ 0.19
SOD3-202ENST00000593742 TAF1LQ8IZX4 1826 aa16.21■□□□□ 0.19
SOD3-202ENST00000593742 DIAPH1O60610 1272 aaKnown RBP16.2■□□□□ 0.18
SOD3-202ENST00000593742 ATP6V1AP38606 617 aa16.2■□□□□ 0.18
SOD3-202ENST00000593742 CABP4P57796 275 aa16.2■□□□□ 0.18
SOD3-202ENST00000593742 SMIM5Q71RC9 77 aa16.2■□□□□ 0.18
SOD3-202ENST00000593742 SLC16A10Q8TF71 515 aa16.2■□□□□ 0.18
SOD3-202ENST00000593742 DCAF5Q96JK2 942 aa16.2■□□□□ 0.18
SOD3-202ENST00000593742 ATG3Q9NT62 314 aa16.2■□□□□ 0.18
SOD3-202ENST00000593742 PLEKHG2Q9H7P9 1386 aa16.2■□□□□ 0.18
SOD3-202ENST00000593742 KDM6AO15550 1401 aaPredicted RBP16.19■□□□□ 0.18
SOD3-202ENST00000593742 C4BP0C0L5 1744 aa16.19■□□□□ 0.18
SOD3-202ENST00000593742 KDRP35968 1356 aa16.19■□□□□ 0.18
SOD3-202ENST00000593742 U2SURPO15042 1029 aaKnown RBP16.19■□□□□ 0.18
SOD3-202ENST00000593742 LINC00116Q8NCU8 138 aa16.19■□□□□ 0.18
SOD3-202ENST00000593742 SYT17Q9BSW7 474 aa16.19■□□□□ 0.18
SOD3-202ENST00000593742 RBM42Q9BTD8 480 aaKnown RBP16.19■□□□□ 0.18
SOD3-202ENST00000593742 UTRNP46939 3433 aa16.18■□□□□ 0.18
SOD3-202ENST00000593742 ERVV-2B6SEH9 535 aa16.18■□□□□ 0.18
SOD3-202ENST00000593742 NPC1L1Q9UHC9 1359 aa16.17■□□□□ 0.18
SOD3-202ENST00000593742 ITPK1Q13572 414 aa16.17■□□□□ 0.18
SOD3-202ENST00000593742 AMIGO3Q86WK7 504 aa16.17■□□□□ 0.18
SOD3-202ENST00000593742 GNPATO15228 680 aa16.16■□□□□ 0.18
SOD3-202ENST00000593742 HMGB2P26583 209 aaKnown RBP16.16■□□□□ 0.18
SOD3-202ENST00000593742 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.15■□□□□ 0.18
SOD3-202ENST00000593742 FLAD1Q8NFF5 587 aa16.15■□□□□ 0.18
SOD3-202ENST00000593742 PTCD1O75127 700 aaKnown RBP16.14■□□□□ 0.17
SOD3-202ENST00000593742 AKAP4Q5JQC9 854 aa16.14■□□□□ 0.17
SOD3-202ENST00000593742 SAMD1Q6SPF0 538 aaPredicted RBP16.14■□□□□ 0.17
SOD3-202ENST00000593742 PELP1Q8IZL8 1130 aaKnown RBP16.14■□□□□ 0.17
SOD3-202ENST00000593742 NFATC2IPQ8NCF5 419 aa16.14■□□□□ 0.17
SOD3-202ENST00000593742 COL3A1P02461 1466 aaPredicted RBP16.14■□□□□ 0.17
SOD3-202ENST00000593742 CFAP53Q96M91 514 aa16.13■□□□□ 0.17
SOD3-202ENST00000593742 UBR3Q6ZT12 1888 aa16.13■□□□□ 0.17
SOD3-202ENST00000593742 YY1P25490 414 aa16.12■□□□□ 0.17
SOD3-202ENST00000593742 MTHFSDQ2M296 383 aaKnown RBP16.12■□□□□ 0.17
SOD3-202ENST00000593742 SLC4A9Q96Q91 983 aa16.12■□□□□ 0.17
SOD3-202ENST00000593742 LGR6Q9HBX8 967 aa16.12■□□□□ 0.17
SOD3-202ENST00000593742 SCN11AQ9UI33 1791 aa16.11■□□□□ 0.17
SOD3-202ENST00000593742 COL24A1Q17RW2 1714 aa16.11■□□□□ 0.17
SOD3-202ENST00000593742 RNMTO43148 476 aaKnown RBP16.1■□□□□ 0.17
SOD3-202ENST00000593742 SSFA2P28290 1259 aa16.1■□□□□ 0.17
SOD3-202ENST00000593742 PPP2R1AP30153 589 aa16.1■□□□□ 0.17
SOD3-202ENST00000593742 NLGN2Q8NFZ4 835 aa16.1■□□□□ 0.17
SOD3-202ENST00000593742 GPR162Q16538 588 aa16.09■□□□□ 0.17
SOD3-202ENST00000593742 SLC52A2Q9HAB3 445 aa16.09■□□□□ 0.17
SOD3-202ENST00000593742 MAP3K5Q99683 1374 aa16.09■□□□□ 0.17
SOD3-202ENST00000593742 GOLGB1Q14789 3259 aaKnown RBP16.09■□□□□ 0.17
SOD3-202ENST00000593742 VIRMAQ69YN4 1812 aaKnown RBP16.08■□□□□ 0.17
SOD3-202ENST00000593742 SLC39A6Q13433 755 aa16.08■□□□□ 0.16
SOD3-202ENST00000593742 RTCBQ9Y3I0 505 aaKnown RBP16.08■□□□□ 0.16
SOD3-202ENST00000593742 CAPN15O75808 1086 aa16.07■□□□□ 0.16
SOD3-202ENST00000593742 U2AF1L5P0DN76 240 aaPredicted RBP16.07■□□□□ 0.16
SOD3-202ENST00000593742 PRKAR2BP31323 418 aa16.07■□□□□ 0.16
SOD3-202ENST00000593742 U2AF1Q01081 240 aaKnown RBP eCLIP16.07■□□□□ 0.16
SOD3-202ENST00000593742 TRAPPC3LQ5T215 181 aa16.07■□□□□ 0.16
SOD3-202ENST00000593742 NUDCQ9Y266 331 aa16.07■□□□□ 0.16
SOD3-202ENST00000593742 COL5A3P25940 1745 aaPredicted RBP16.06■□□□□ 0.16
SOD3-202ENST00000593742 CNTNAP4Q9C0A0 1308 aa16.05■□□□□ 0.16
SOD3-202ENST00000593742 GAS2L2Q8NHY3 880 aa16.05■□□□□ 0.16
SOD3-202ENST00000593742 MRC1P22897 1456 aa16.04■□□□□ 0.16
SOD3-202ENST00000593742 MYH14Q7Z406 1995 aaKnown RBP16.04■□□□□ 0.16
SOD3-202ENST00000593742 CRKLP46109 303 aaKnown RBP16.04■□□□□ 0.16
SOD3-202ENST00000593742 WWC3Q9ULE0 1092 aa16.04■□□□□ 0.16
SOD3-202ENST00000593742 TJP1Q07157 1748 aa16.04■□□□□ 0.16
SOD3-202ENST00000593742 ZNF831Q5JPB2 1677 aa16.04■□□□□ 0.16
SOD3-202ENST00000593742 GNAT3A8MTJ3 354 aa16.03■□□□□ 0.16
SOD3-202ENST00000593742 RFC4P35249 363 aa16.03■□□□□ 0.16
SOD3-202ENST00000593742 RC3H1Q5TC82 1133 aaKnown RBP16.03■□□□□ 0.16
SOD3-202ENST00000593742 DNAJC10Q8IXB1 793 aa16.03■□□□□ 0.16
SOD3-202ENST00000593742 ARHGEF1Q92888 912 aaKnown RBP16.03■□□□□ 0.16
SOD3-202ENST00000593742 PHACTR3Q96KR7 559 aa16.03■□□□□ 0.16
SOD3-202ENST00000593742 RSPH6AQ9H0K4 717 aa16.03■□□□□ 0.16
SOD3-202ENST00000593742 RPS6KA4O75676 772 aa16.02■□□□□ 0.16
SOD3-202ENST00000593742 MMP10P09238 476 aa16.02■□□□□ 0.16
SOD3-202ENST00000593742 TEFQ10587 303 aa16.02■□□□□ 0.16
SOD3-202ENST00000593742 TTC5Q8N0Z6 440 aa16.02■□□□□ 0.16
SOD3-202ENST00000593742 KCPQ6ZWJ8 1503 aa16■□□□□ 0.15
SOD3-202ENST00000593742 ADAMTS7Q9UKP4 1686 aa16■□□□□ 0.15
SOD3-202ENST00000593742 IL17REQ8NFR9 667 aa16■□□□□ 0.15
SOD3-202ENST00000593742 SRP68Q9UHB9 627 aaKnown RBP16■□□□□ 0.15
SOD3-202ENST00000593742 CD2APQ9Y5K6 639 aa16■□□□□ 0.15
SOD3-202ENST00000593742 C4AP0C0L4 1744 aa15.99■□□□□ 0.15
SOD3-202ENST00000593742 YBX3P16989 372 aaKnown RBP eCLIP15.99■□□□□ 0.15
SOD3-202ENST00000593742 DDX10Q13206 875 aaKnown RBP15.99■□□□□ 0.15
SOD3-202ENST00000593742 CICQ96RK0 1608 aaPredicted RBP15.98■□□□□ 0.15
SOD3-202ENST00000593742 CHD4Q14839 1912 aa15.98■□□□□ 0.15
SOD3-202ENST00000593742 GYS1P13807 737 aa15.98■□□□□ 0.15
SOD3-202ENST00000593742 INTS5Q6P9B9 1019 aaKnown RBP15.98■□□□□ 0.15
SOD3-202ENST00000593742 NLGN1Q8N2Q7 840 aa15.98■□□□□ 0.15
SOD3-202ENST00000593742 CCDC87Q9NVE4 849 aa15.98■□□□□ 0.15
SOD3-202ENST00000593742 RTF1Q92541 710 aaKnown RBP15.97■□□□□ 0.15
SOD3-202ENST00000593742 FCHSD2O94868 740 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms