RNA–Protein interactions for RNA: ENST00000592954.1

APOC4-202, Transcript of apolipoprotein C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC4, Length 615 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-202ENST00000592954 LINC00116Q8NCU8 138 aa18.28■□□□□ 0.52
APOC4-202ENST00000592954 GOLGB1Q14789 3259 aaKnown RBP18.28■□□□□ 0.52
APOC4-202ENST00000592954 GPR162Q16538 588 aa18.27■□□□□ 0.52
APOC4-202ENST00000592954 RBM42Q9BTD8 480 aaKnown RBP18.27■□□□□ 0.52
APOC4-202ENST00000592954 CHD4Q14839 1912 aa18.27■□□□□ 0.51
APOC4-202ENST00000592954 MAP3K5Q99683 1374 aa18.27■□□□□ 0.51
APOC4-202ENST00000592954 PLEKHG2Q9H7P9 1386 aa18.27■□□□□ 0.51
APOC4-202ENST00000592954 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.26■□□□□ 0.51
APOC4-202ENST00000592954 ITPK1Q13572 414 aa18.26■□□□□ 0.51
APOC4-202ENST00000592954 AMIGO3Q86WK7 504 aa18.26■□□□□ 0.51
APOC4-202ENST00000592954 ZNF784Q8NCA9 323 aaPredicted RBP18.25■□□□□ 0.51
APOC4-202ENST00000592954 C4BP0C0L5 1744 aa18.25■□□□□ 0.51
APOC4-202ENST00000592954 TAF1LQ8IZX4 1826 aa18.24■□□□□ 0.51
APOC4-202ENST00000592954 GNPATO15228 680 aa18.24■□□□□ 0.51
APOC4-202ENST00000592954 HMOX1P09601 288 aa18.24■□□□□ 0.51
APOC4-202ENST00000592954 NLGN2Q8NFZ4 835 aa18.24■□□□□ 0.51
APOC4-202ENST00000592954 KDM6AO15550 1401 aaPredicted RBP18.23■□□□□ 0.51
APOC4-202ENST00000592954 KDRP35968 1356 aa18.22■□□□□ 0.51
APOC4-202ENST00000592954 DIAPH1O60610 1272 aaKnown RBP18.22■□□□□ 0.51
APOC4-202ENST00000592954 SSFA2P28290 1259 aa18.22■□□□□ 0.51
APOC4-202ENST00000592954 NFATC2IPQ8NCF5 419 aa18.22■□□□□ 0.51
APOC4-202ENST00000592954 COL24A1Q17RW2 1714 aa18.2■□□□□ 0.5
APOC4-202ENST00000592954 PTCD1O75127 700 aaKnown RBP18.2■□□□□ 0.5
APOC4-202ENST00000592954 SLC4A9Q96Q91 983 aa18.2■□□□□ 0.5
APOC4-202ENST00000592954 AKAP4Q5JQC9 854 aa18.19■□□□□ 0.5
APOC4-202ENST00000592954 U2SURPO15042 1029 aaKnown RBP18.18■□□□□ 0.5
APOC4-202ENST00000592954 TRAPPC3LQ5T215 181 aa18.18■□□□□ 0.5
APOC4-202ENST00000592954 RTCBQ9Y3I0 505 aaKnown RBP18.18■□□□□ 0.5
APOC4-202ENST00000592954 LGR6Q9HBX8 967 aa18.17■□□□□ 0.5
APOC4-202ENST00000592954 CD2APQ9Y5K6 639 aa18.17■□□□□ 0.5
APOC4-202ENST00000592954 NPC1L1Q9UHC9 1359 aa18.17■□□□□ 0.5
APOC4-202ENST00000592954 UBR3Q6ZT12 1888 aa18.16■□□□□ 0.5
APOC4-202ENST00000592954 MTHFSDQ2M296 383 aaKnown RBP18.15■□□□□ 0.5
APOC4-202ENST00000592954 RNMTO43148 476 aaKnown RBP18.14■□□□□ 0.49
APOC4-202ENST00000592954 RC3H1Q5TC82 1133 aaKnown RBP18.14■□□□□ 0.49
APOC4-202ENST00000592954 SLC52A2Q9HAB3 445 aa18.14■□□□□ 0.49
APOC4-202ENST00000592954 YBX3P16989 372 aaKnown RBP eCLIP18.13■□□□□ 0.49
APOC4-202ENST00000592954 RFC4P35249 363 aa18.13■□□□□ 0.49
APOC4-202ENST00000592954 ARHGEF1Q92888 912 aaKnown RBP18.13■□□□□ 0.49
APOC4-202ENST00000592954 CNTNAP4Q9C0A0 1308 aa18.13■□□□□ 0.49
APOC4-202ENST00000592954 GRIN3BO60391 1043 aa18.12■□□□□ 0.49
APOC4-202ENST00000592954 RPS6KA4O75676 772 aa18.12■□□□□ 0.49
APOC4-202ENST00000592954 MMP10P09238 476 aa18.12■□□□□ 0.49
APOC4-202ENST00000592954 CFAP53Q96M91 514 aa18.12■□□□□ 0.49
APOC4-202ENST00000592954 WWC3Q9ULE0 1092 aa18.12■□□□□ 0.49
APOC4-202ENST00000592954 ADRA2BP18089 450 aa18.11■□□□□ 0.49
APOC4-202ENST00000592954 CRKLP46109 303 aaKnown RBP18.11■□□□□ 0.49
APOC4-202ENST00000592954 SLC39A6Q13433 755 aa18.11■□□□□ 0.49
APOC4-202ENST00000592954 C1QTNF8P60827 252 aa18.1■□□□□ 0.49
APOC4-202ENST00000592954 NLGN1Q8N2Q7 840 aa18.1■□□□□ 0.49
APOC4-202ENST00000592954 SCN11AQ9UI33 1791 aa18.09■□□□□ 0.49
APOC4-202ENST00000592954 COL3A1P02461 1466 aaPredicted RBP18.08■□□□□ 0.49
APOC4-202ENST00000592954 DNAJC10Q8IXB1 793 aa18.08■□□□□ 0.48
APOC4-202ENST00000592954 ZNF831Q5JPB2 1677 aa18.08■□□□□ 0.48
APOC4-202ENST00000592954 GYS1P13807 737 aa18.07■□□□□ 0.48
APOC4-202ENST00000592954 NUDCQ9Y266 331 aa18.07■□□□□ 0.48
APOC4-202ENST00000592954 COL5A3P25940 1745 aaPredicted RBP18.06■□□□□ 0.48
APOC4-202ENST00000592954 SENP3-EIF4A1A0A087X0R7 540 aa18.06■□□□□ 0.48
APOC4-202ENST00000592954 GNAT3A8MTJ3 354 aa18.06■□□□□ 0.48
APOC4-202ENST00000592954 PPP2R1AP30153 589 aa18.06■□□□□ 0.48
APOC4-202ENST00000592954 GAS2L2Q8NHY3 880 aa18.06■□□□□ 0.48
APOC4-202ENST00000592954 SRP68Q9UHB9 627 aaKnown RBP18.06■□□□□ 0.48
APOC4-202ENST00000592954 CEP350Q5VT06 3117 aa18.06■□□□□ 0.48
APOC4-202ENST00000592954 PRKAR2BP31323 418 aa18.05■□□□□ 0.48
APOC4-202ENST00000592954 TEFQ10587 303 aa18.05■□□□□ 0.48
APOC4-202ENST00000592954 INTS5Q6P9B9 1019 aaKnown RBP18.05■□□□□ 0.48
APOC4-202ENST00000592954 CCDC87Q9NVE4 849 aa18.05■□□□□ 0.48
APOC4-202ENST00000592954 PARP3Q9Y6F1 533 aa18.05■□□□□ 0.48
APOC4-202ENST00000592954 U2AF1L5P0DN76 240 aaPredicted RBP18.04■□□□□ 0.48
APOC4-202ENST00000592954 U2AF1Q01081 240 aaKnown RBP eCLIP18.04■□□□□ 0.48
APOC4-202ENST00000592954 TTC5Q8N0Z6 440 aa18.04■□□□□ 0.48
APOC4-202ENST00000592954 MYH14Q7Z406 1995 aaKnown RBP18.03■□□□□ 0.48
APOC4-202ENST00000592954 IL17REQ8NFR9 667 aa18.03■□□□□ 0.48
APOC4-202ENST00000592954 PHACTR3Q96KR7 559 aa18.03■□□□□ 0.48
APOC4-202ENST00000592954 MRC1P22897 1456 aa18.02■□□□□ 0.48
APOC4-202ENST00000592954 ZPR1O75312 459 aa18.02■□□□□ 0.48
APOC4-202ENST00000592954 CYP19A1P11511 503 aaPredicted RBP18.02■□□□□ 0.48
APOC4-202ENST00000592954 TJP1Q07157 1748 aa18.02■□□□□ 0.48
APOC4-202ENST00000592954 FKBP8Q14318 412 aa18.02■□□□□ 0.48
APOC4-202ENST00000592954 CICQ96RK0 1608 aaPredicted RBP18.01■□□□□ 0.47
APOC4-202ENST00000592954 USP42Q9H9J4 1324 aaKnown RBP18.01■□□□□ 0.47
APOC4-202ENST00000592954 A0A0G2JLW4 131 aa18.01■□□□□ 0.47
APOC4-202ENST00000592954 GIGYF1O75420 1035 aaPredicted RBP18.01■□□□□ 0.47
APOC4-202ENST00000592954 RSPH6AQ9H0K4 717 aa18.01■□□□□ 0.47
APOC4-202ENST00000592954 TGFB2P61812 414 aa18■□□□□ 0.47
APOC4-202ENST00000592954 USPL1Q5W0Q7 1092 aa18■□□□□ 0.47
APOC4-202ENST00000592954 VSIG10Q8N0Z9 540 aa18■□□□□ 0.47
APOC4-202ENST00000592954 CANXP27824 592 aaKnown RBP17.99■□□□□ 0.47
APOC4-202ENST00000592954 ZBTB1Q9Y2K1 713 aa17.99■□□□□ 0.47
APOC4-202ENST00000592954 SOS1Q07889 1333 aaPredicted RBP17.98■□□□□ 0.47
APOC4-202ENST00000592954 KCPQ6ZWJ8 1503 aa17.98■□□□□ 0.47
APOC4-202ENST00000592954 STARD3NLO95772 234 aa17.98■□□□□ 0.47
APOC4-202ENST00000592954 ZNF790Q6PG37 636 aa17.98■□□□□ 0.47
APOC4-202ENST00000592954 ZNF496Q96IT1 587 aaPredicted RBP17.98■□□□□ 0.47
APOC4-202ENST00000592954 BCS1LQ9Y276 419 aa17.98■□□□□ 0.47
APOC4-202ENST00000592954 VIRMAQ69YN4 1812 aaKnown RBP17.98■□□□□ 0.47
APOC4-202ENST00000592954 C4AP0C0L4 1744 aa17.98■□□□□ 0.47
APOC4-202ENST00000592954 ADAMTS7Q9UKP4 1686 aa17.97■□□□□ 0.47
APOC4-202ENST00000592954 PXDNLA1KZ92 1463 aa17.97■□□□□ 0.47
APOC4-202ENST00000592954 FCHSD2O94868 740 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms