RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 WDR90Q96KV7 1748 aa13.73□□□□□ -0.21
RETREG3-211ENST00000591547 TOMM70O94826 608 aa13.73□□□□□ -0.21
RETREG3-211ENST00000591547 DPEP1P16444 411 aa13.73□□□□□ -0.21
RETREG3-211ENST00000591547 SLC4A9Q96Q91 983 aa13.73□□□□□ -0.21
RETREG3-211ENST00000591547 CARD14Q9BXL6 1004 aa13.73□□□□□ -0.21
RETREG3-211ENST00000591547 TMOD3Q9NYL9 352 aa13.73□□□□□ -0.21
RETREG3-211ENST00000591547 BRCA1P38398 1863 aaKnown RBP13.72□□□□□ -0.21
RETREG3-211ENST00000591547 CCER1Q8TC90 406 aaPredicted RBP13.72□□□□□ -0.21
RETREG3-211ENST00000591547 NSD3Q9BZ95 1437 aa13.72□□□□□ -0.21
RETREG3-211ENST00000591547 FCHSD2O94868 740 aa13.71□□□□□ -0.21
RETREG3-211ENST00000591547 EYA1Q99502 592 aa13.71□□□□□ -0.21
RETREG3-211ENST00000591547 SPG7Q9UQ90 795 aa13.71□□□□□ -0.21
RETREG3-211ENST00000591547 NCAPD2Q15021 1401 aa13.71□□□□□ -0.22
RETREG3-211ENST00000591547 C4AP0C0L4 1744 aa13.7□□□□□ -0.22
RETREG3-211ENST00000591547 CAPN15O75808 1086 aa13.7□□□□□ -0.22
RETREG3-211ENST00000591547 PHKG2P15735 406 aa13.7□□□□□ -0.22
RETREG3-211ENST00000591547 COL13A1Q5TAT6 717 aaPredicted RBP13.7□□□□□ -0.22
RETREG3-211ENST00000591547 ARHGEF1Q92888 912 aaKnown RBP13.7□□□□□ -0.22
RETREG3-211ENST00000591547 RBM42Q9BTD8 480 aaKnown RBP13.7□□□□□ -0.22
RETREG3-211ENST00000591547 C10orf71Q711Q0 1435 aa13.7□□□□□ -0.22
RETREG3-211ENST00000591547 KCNA3P22001 575 aa13.69□□□□□ -0.22
RETREG3-211ENST00000591547 HMGB2P26583 209 aaKnown RBP13.69□□□□□ -0.22
RETREG3-211ENST00000591547 TGFB2P61812 414 aa13.69□□□□□ -0.22
RETREG3-211ENST00000591547 TMF1P82094 1093 aa13.69□□□□□ -0.22
RETREG3-211ENST00000591547 TRAPPC3LQ5T215 181 aa13.69□□□□□ -0.22
RETREG3-211ENST00000591547 C9orf131Q5VYM1 1079 aa13.69□□□□□ -0.22
RETREG3-211ENST00000591547 COL5A3P25940 1745 aaPredicted RBP13.69□□□□□ -0.22
RETREG3-211ENST00000591547 ANKRD26Q9UPS8 1709 aa13.69□□□□□ -0.22
RETREG3-211ENST00000591547 GYS1P13807 737 aa13.68□□□□□ -0.22
RETREG3-211ENST00000591547 IFNL2Q8IZJ0 200 aa13.68□□□□□ -0.22
RETREG3-211ENST00000591547 RTCBQ9Y3I0 505 aaKnown RBP13.68□□□□□ -0.22
RETREG3-211ENST00000591547 MYH14Q7Z406 1995 aaKnown RBP13.68□□□□□ -0.22
RETREG3-211ENST00000591547 KCPQ6ZWJ8 1503 aa13.68□□□□□ -0.22
RETREG3-211ENST00000591547 KDRP35968 1356 aa13.68□□□□□ -0.22
RETREG3-211ENST00000591547 KIF24Q5T7B8 1368 aa13.68□□□□□ -0.22
RETREG3-211ENST00000591547 ARFGEF1Q9Y6D6 1849 aa13.67□□□□□ -0.22
RETREG3-211ENST00000591547 NLGN1Q8N2Q7 840 aa13.66□□□□□ -0.22
RETREG3-211ENST00000591547 RRAGCQ9HB90 399 aa13.66□□□□□ -0.22
RETREG3-211ENST00000591547 CCDC87Q9NVE4 849 aa13.66□□□□□ -0.22
RETREG3-211ENST00000591547 SRP68Q9UHB9 627 aaKnown RBP13.66□□□□□ -0.22
RETREG3-211ENST00000591547 WASHC2AQ641Q2 1341 aa13.65□□□□□ -0.22
RETREG3-211ENST00000591547 PCNTO95613 3336 aa13.65□□□□□ -0.22
RETREG3-211ENST00000591547 TNNT2P45379 298 aaPredicted RBP13.65□□□□□ -0.22
RETREG3-211ENST00000591547 RBM46Q8TBY0 533 aaKnown RBP13.65□□□□□ -0.22
RETREG3-211ENST00000591547 KLRG1Q96E93 195 aa13.65□□□□□ -0.22
RETREG3-211ENST00000591547 POLKQ9UBT6 870 aa13.65□□□□□ -0.22
RETREG3-211ENST00000591547 PARP3Q9Y6F1 533 aa13.65□□□□□ -0.22
RETREG3-211ENST00000591547 SBF1O95248 1867 aa13.64□□□□□ -0.23
RETREG3-211ENST00000591547 CHRNA5P30532 468 aa13.64□□□□□ -0.23
RETREG3-211ENST00000591547 RFC4P35249 363 aa13.64□□□□□ -0.23
RETREG3-211ENST00000591547 EIF4A2Q14240 407 aaKnown RBP13.64□□□□□ -0.23
RETREG3-211ENST00000591547 C16orf71Q8IYS4 520 aaPredicted RBP13.64□□□□□ -0.23
RETREG3-211ENST00000591547 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.64□□□□□ -0.23
RETREG3-211ENST00000591547 RPS6KA4O75676 772 aa13.63□□□□□ -0.23
RETREG3-211ENST00000591547 DDR1Q08345 913 aa13.63□□□□□ -0.23
RETREG3-211ENST00000591547 FKBP8Q14318 412 aa13.63□□□□□ -0.23
RETREG3-211ENST00000591547 RNF181Q9P0P0 153 aa13.63□□□□□ -0.23
RETREG3-211ENST00000591547 ZNF831Q5JPB2 1677 aa13.63□□□□□ -0.23
RETREG3-211ENST00000591547 SLC24A1O60721 1099 aa13.62□□□□□ -0.23
RETREG3-211ENST00000591547 PTCD1O75127 700 aaKnown RBP13.62□□□□□ -0.23
RETREG3-211ENST00000591547 RC3H1Q5TC82 1133 aaKnown RBP13.62□□□□□ -0.23
RETREG3-211ENST00000591547 JMYQ8N9B5 988 aa13.62□□□□□ -0.23
RETREG3-211ENST00000591547 DCAF5Q96JK2 942 aa13.62□□□□□ -0.23
RETREG3-211ENST00000591547 PIM2Q9P1W9 311 aa13.62□□□□□ -0.23
RETREG3-211ENST00000591547 KDM6AO15550 1401 aaPredicted RBP13.62□□□□□ -0.23
RETREG3-211ENST00000591547 CNTNAP4Q9C0A0 1308 aa13.62□□□□□ -0.23
RETREG3-211ENST00000591547 DALRD3Q5D0E6 543 aaKnown RBP13.61□□□□□ -0.23
RETREG3-211ENST00000591547 TJP1Q07157 1748 aa13.61□□□□□ -0.23
RETREG3-211ENST00000591547 ERVV-2B6SEH9 535 aa13.6□□□□□ -0.23
RETREG3-211ENST00000591547 ADRA2BP18089 450 aa13.6□□□□□ -0.23
RETREG3-211ENST00000591547 PRELPP51888 382 aa13.6□□□□□ -0.23
RETREG3-211ENST00000591547 RASSF7Q02833 373 aa13.6□□□□□ -0.23
RETREG3-211ENST00000591547 TNRC6CQ9HCJ0 1690 aaKnown RBP13.59□□□□□ -0.23
RETREG3-211ENST00000591547 CRKLP46109 303 aaKnown RBP13.59□□□□□ -0.23
RETREG3-211ENST00000591547 CABP4P57796 275 aa13.59□□□□□ -0.23
RETREG3-211ENST00000591547 FSTL1Q12841 308 aa13.59□□□□□ -0.23
RETREG3-211ENST00000591547 TNS4Q8IZW8 715 aa13.59□□□□□ -0.23
RETREG3-211ENST00000591547 POLR3GLQ9BT43 218 aa13.59□□□□□ -0.23
RETREG3-211ENST00000591547 ADAMTS7Q9UKP4 1686 aa13.59□□□□□ -0.23
RETREG3-211ENST00000591547 PLEKHG2Q9H7P9 1386 aa13.58□□□□□ -0.23
RETREG3-211ENST00000591547 ZNF530Q6P9A1 599 aaPredicted RBP13.58□□□□□ -0.24
RETREG3-211ENST00000591547 AEBP1Q8IUX7 1158 aa13.58□□□□□ -0.24
RETREG3-211ENST00000591547 CCDC88AQ3V6T2 1871 aa13.58□□□□□ -0.24
RETREG3-211ENST00000591547 KDM2BQ8NHM5 1336 aa13.58□□□□□ -0.24
RETREG3-211ENST00000591547 USP42Q9H9J4 1324 aaKnown RBP13.58□□□□□ -0.24
RETREG3-211ENST00000591547 AFDNP55196 1824 aaKnown RBP13.57□□□□□ -0.24
RETREG3-211ENST00000591547 CDCA8Q53HL2 280 aa13.57□□□□□ -0.24
RETREG3-211ENST00000591547 NFATC2IPQ8NCF5 419 aa13.57□□□□□ -0.24
RETREG3-211ENST00000591547 POLRMTO00411 1230 aaKnown RBP13.56□□□□□ -0.24
RETREG3-211ENST00000591547 TM4SF1P30408 202 aa13.56□□□□□ -0.24
RETREG3-211ENST00000591547 PLEKHO1Q53GL0 409 aaPredicted RBP13.56□□□□□ -0.24
RETREG3-211ENST00000591547 INTS5Q6P9B9 1019 aaKnown RBP13.56□□□□□ -0.24
RETREG3-211ENST00000591547 MTHFSP49914 203 aa13.55□□□□□ -0.24
RETREG3-211ENST00000591547 USPL1Q5W0Q7 1092 aa13.55□□□□□ -0.24
RETREG3-211ENST00000591547 TIMELESSQ9UNS1 1208 aa13.55□□□□□ -0.24
RETREG3-211ENST00000591547 TIAM2Q8IVF5 1701 aa13.54□□□□□ -0.24
RETREG3-211ENST00000591547 HSP90AB1P08238 724 aaKnown RBP13.54□□□□□ -0.24
RETREG3-211ENST00000591547 HSPA1AP0DMV8 641 aaKnown RBP13.54□□□□□ -0.24
RETREG3-211ENST00000591547 HSPA1BP0DMV9 641 aaKnown RBP13.54□□□□□ -0.24
RETREG3-211ENST00000591547 DNAJC10Q8IXB1 793 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms