RNA–Protein interactions for RNA: ENST00000590701.5

ERCC1-211, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-211ENST00000590701 KIF20BQ96Q89 1820 aa20.43■□□□□ 0.86
ERCC1-211ENST00000590701 PXDNLA1KZ92 1463 aa20.43■□□□□ 0.86
ERCC1-211ENST00000590701 TGFB2P61812 414 aa20.42■□□□□ 0.86
ERCC1-211ENST00000590701 TMF1P82094 1093 aa20.42■□□□□ 0.86
ERCC1-211ENST00000590701 HTRA3P83110 453 aa20.42■□□□□ 0.86
ERCC1-211ENST00000590701 TRAPPC3LQ5T215 181 aa20.42■□□□□ 0.86
ERCC1-211ENST00000590701 KIF13BQ9NQT8 1826 aa20.41■□□□□ 0.86
ERCC1-211ENST00000590701 DPEP1P16444 411 aa20.41■□□□□ 0.86
ERCC1-211ENST00000590701 CICQ96RK0 1608 aaPredicted RBP20.41■□□□□ 0.86
ERCC1-211ENST00000590701 PHKG2P15735 406 aa20.4■□□□□ 0.86
ERCC1-211ENST00000590701 KIF24Q5T7B8 1368 aa20.4■□□□□ 0.86
ERCC1-211ENST00000590701 ARHGEF1Q92888 912 aaKnown RBP20.4■□□□□ 0.86
ERCC1-211ENST00000590701 SLC4A9Q96Q91 983 aa20.4■□□□□ 0.86
ERCC1-211ENST00000590701 FCHSD2O94868 740 aa20.39■□□□□ 0.85
ERCC1-211ENST00000590701 IFNL2Q8IZJ0 200 aa20.39■□□□□ 0.85
ERCC1-211ENST00000590701 NLGN1Q8N2Q7 840 aa20.39■□□□□ 0.85
ERCC1-211ENST00000590701 RTCBQ9Y3I0 505 aaKnown RBP20.39■□□□□ 0.85
ERCC1-211ENST00000590701 RBM42Q9BTD8 480 aaKnown RBP20.38■□□□□ 0.85
ERCC1-211ENST00000590701 KCNA3P22001 575 aa20.37■□□□□ 0.85
ERCC1-211ENST00000590701 C9orf131Q5VYM1 1079 aa20.37■□□□□ 0.85
ERCC1-211ENST00000590701 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.37■□□□□ 0.85
ERCC1-211ENST00000590701 NCAPD2Q15021 1401 aa20.36■□□□□ 0.85
ERCC1-211ENST00000590701 WASHC2AQ641Q2 1341 aa20.36■□□□□ 0.85
ERCC1-211ENST00000590701 GYS1P13807 737 aa20.35■□□□□ 0.85
ERCC1-211ENST00000590701 COL13A1Q5TAT6 717 aaPredicted RBP20.35■□□□□ 0.85
ERCC1-211ENST00000590701 CCDC87Q9NVE4 849 aa20.35■□□□□ 0.85
ERCC1-211ENST00000590701 WDR90Q96KV7 1748 aa20.33■□□□□ 0.85
ERCC1-211ENST00000590701 BRCA1P38398 1863 aaKnown RBP20.33■□□□□ 0.85
ERCC1-211ENST00000590701 RFC4P35249 363 aa20.33■□□□□ 0.85
ERCC1-211ENST00000590701 RBM46Q8TBY0 533 aaKnown RBP20.33■□□□□ 0.85
ERCC1-211ENST00000590701 POLKQ9UBT6 870 aa20.33■□□□□ 0.85
ERCC1-211ENST00000590701 PARP3Q9Y6F1 533 aa20.33■□□□□ 0.85
ERCC1-211ENST00000590701 C10orf71Q711Q0 1435 aa20.33■□□□□ 0.84
ERCC1-211ENST00000590701 MYH14Q7Z406 1995 aaKnown RBP20.32■□□□□ 0.84
ERCC1-211ENST00000590701 RPS6KA4O75676 772 aa20.32■□□□□ 0.84
ERCC1-211ENST00000590701 RC3H1Q5TC82 1133 aaKnown RBP20.32■□□□□ 0.84
ERCC1-211ENST00000590701 RRAGCQ9HB90 399 aa20.32■□□□□ 0.84
ERCC1-211ENST00000590701 C4AP0C0L4 1744 aa20.31■□□□□ 0.84
ERCC1-211ENST00000590701 C16orf71Q8IYS4 520 aaPredicted RBP20.31■□□□□ 0.84
ERCC1-211ENST00000590701 KLRG1Q96E93 195 aa20.31■□□□□ 0.84
ERCC1-211ENST00000590701 KDRP35968 1356 aa20.31■□□□□ 0.84
ERCC1-211ENST00000590701 CAPN15O75808 1086 aa20.3■□□□□ 0.84
ERCC1-211ENST00000590701 EIF4A2Q14240 407 aaKnown RBP20.3■□□□□ 0.84
ERCC1-211ENST00000590701 PIM2Q9P1W9 311 aa20.3■□□□□ 0.84
ERCC1-211ENST00000590701 TNNT2P45379 298 aaPredicted RBP20.29■□□□□ 0.84
ERCC1-211ENST00000590701 CDCA8Q53HL2 280 aa20.29■□□□□ 0.84
ERCC1-211ENST00000590701 SRP68Q9UHB9 627 aaKnown RBP20.29■□□□□ 0.84
ERCC1-211ENST00000590701 ARFGEF1Q9Y6D6 1849 aa20.28■□□□□ 0.84
ERCC1-211ENST00000590701 ERVV-2B6SEH9 535 aa20.28■□□□□ 0.84
ERCC1-211ENST00000590701 ADRA2BP18089 450 aa20.28■□□□□ 0.84
ERCC1-211ENST00000590701 KCPQ6ZWJ8 1503 aa20.27■□□□□ 0.84
ERCC1-211ENST00000590701 CHRNA5P30532 468 aa20.27■□□□□ 0.84
ERCC1-211ENST00000590701 JMYQ8N9B5 988 aa20.27■□□□□ 0.84
ERCC1-211ENST00000590701 RNF181Q9P0P0 153 aa20.27■□□□□ 0.84
ERCC1-211ENST00000590701 COL5A3P25940 1745 aaPredicted RBP20.27■□□□□ 0.83
ERCC1-211ENST00000590701 ANKRD26Q9UPS8 1709 aa20.27■□□□□ 0.83
ERCC1-211ENST00000590701 CNTNAP4Q9C0A0 1308 aa20.27■□□□□ 0.83
ERCC1-211ENST00000590701 SBF1O95248 1867 aa20.26■□□□□ 0.83
ERCC1-211ENST00000590701 PTCD1O75127 700 aaKnown RBP20.26■□□□□ 0.83
ERCC1-211ENST00000590701 FKBP8Q14318 412 aa20.26■□□□□ 0.83
ERCC1-211ENST00000590701 DALRD3Q5D0E6 543 aaKnown RBP20.26■□□□□ 0.83
ERCC1-211ENST00000590701 DCAF5Q96JK2 942 aa20.26■□□□□ 0.83
ERCC1-211ENST00000590701 CABP4P57796 275 aa20.25■□□□□ 0.83
ERCC1-211ENST00000590701 DDR1Q08345 913 aa20.25■□□□□ 0.83
ERCC1-211ENST00000590701 FSTL1Q12841 308 aa20.25■□□□□ 0.83
ERCC1-211ENST00000590701 KDM2BQ8NHM5 1336 aa20.24■□□□□ 0.83
ERCC1-211ENST00000590701 ZNF831Q5JPB2 1677 aa20.23■□□□□ 0.83
ERCC1-211ENST00000590701 CRKLP46109 303 aaKnown RBP20.23■□□□□ 0.83
ERCC1-211ENST00000590701 PLEKHO1Q53GL0 409 aaPredicted RBP20.22■□□□□ 0.83
ERCC1-211ENST00000590701 ZNF530Q6P9A1 599 aaPredicted RBP20.22■□□□□ 0.83
ERCC1-211ENST00000590701 NFATC2IPQ8NCF5 419 aa20.22■□□□□ 0.83
ERCC1-211ENST00000590701 PLEKHG2Q9H7P9 1386 aa20.21■□□□□ 0.83
ERCC1-211ENST00000590701 HSP90AB1P08238 724 aaKnown RBP20.21■□□□□ 0.83
ERCC1-211ENST00000590701 KDM6AO15550 1401 aaPredicted RBP20.2■□□□□ 0.82
ERCC1-211ENST00000590701 TM4SF1P30408 202 aa20.2■□□□□ 0.82
ERCC1-211ENST00000590701 MTHFSP49914 203 aa20.2■□□□□ 0.82
ERCC1-211ENST00000590701 TNS4Q8IZW8 715 aa20.2■□□□□ 0.82
ERCC1-211ENST00000590701 PCNTO95613 3336 aa20.19■□□□□ 0.82
ERCC1-211ENST00000590701 INTS5Q6P9B9 1019 aaKnown RBP20.19■□□□□ 0.82
ERCC1-211ENST00000590701 POLR3GLQ9BT43 218 aa20.19■□□□□ 0.82
ERCC1-211ENST00000590701 USP42Q9H9J4 1324 aaKnown RBP20.19■□□□□ 0.82
ERCC1-211ENST00000590701 POLRMTO00411 1230 aaKnown RBP20.18■□□□□ 0.82
ERCC1-211ENST00000590701 RASSF7Q02833 373 aa20.18■□□□□ 0.82
ERCC1-211ENST00000590701 PRELPP51888 382 aa20.17■□□□□ 0.82
ERCC1-211ENST00000590701 AEBP1Q8IUX7 1158 aa20.17■□□□□ 0.82
ERCC1-211ENST00000590701 SMC1BQ8NDV3 1235 aa20.17■□□□□ 0.82
ERCC1-211ENST00000590701 CCDC88AQ3V6T2 1871 aa20.16■□□□□ 0.82
ERCC1-211ENST00000590701 USPL1Q5W0Q7 1092 aa20.16■□□□□ 0.82
ERCC1-211ENST00000590701 AMOTQ4VCS5 1084 aa20.15■□□□□ 0.82
ERCC1-211ENST00000590701 TNRC6CQ9HCJ0 1690 aaKnown RBP20.14■□□□□ 0.81
ERCC1-211ENST00000590701 DNAJC10Q8IXB1 793 aa20.14■□□□□ 0.81
ERCC1-211ENST00000590701 TJP1Q07157 1748 aa20.13■□□□□ 0.81
ERCC1-211ENST00000590701 ZPR1O75312 459 aa20.13■□□□□ 0.81
ERCC1-211ENST00000590701 C1orf141Q5JVX7 400 aa20.13■□□□□ 0.81
ERCC1-211ENST00000590701 AFDNP55196 1824 aaKnown RBP20.13■□□□□ 0.81
ERCC1-211ENST00000590701 ADAMTS7Q9UKP4 1686 aa20.12■□□□□ 0.81
ERCC1-211ENST00000590701 GLTPD2A6NH11 291 aa20.11■□□□□ 0.81
ERCC1-211ENST00000590701 VEGFAP15692 232 aaPredicted RBP20.11■□□□□ 0.81
ERCC1-211ENST00000590701 NFIXQ14938 502 aa20.11■□□□□ 0.81
ERCC1-211ENST00000590701 HSPA1AP0DMV8 641 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms