RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 SLC52A2Q9HAB3 445 aa22.45■■□□□ 1.18
CXXC1-212ENST00000589940 MRC1P22897 1456 aa22.44■■□□□ 1.18
CXXC1-212ENST00000589940 SIPA1L3O60292 1781 aaPredicted RBP22.44■■□□□ 1.18
CXXC1-212ENST00000589940 KRT24Q2M2I5 525 aa22.44■■□□□ 1.18
CXXC1-212ENST00000589940 BARGINQ6ZT62 677 aa22.44■■□□□ 1.18
CXXC1-212ENST00000589940 SMC4Q9NTJ3 1288 aa22.44■■□□□ 1.18
CXXC1-212ENST00000589940 USP21Q9UK80 565 aa22.44■■□□□ 1.18
CXXC1-212ENST00000589940 ERICH6BQ5W0A0 696 aa22.43■■□□□ 1.18
CXXC1-212ENST00000589940 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.43■■□□□ 1.18
CXXC1-212ENST00000589940 KDM3BQ7LBC6 1761 aa22.43■■□□□ 1.18
CXXC1-212ENST00000589940 TNS2Q63HR2 1409 aa22.42■■□□□ 1.18
CXXC1-212ENST00000589940 EXOC5O00471 708 aa22.42■■□□□ 1.18
CXXC1-212ENST00000589940 CANXP27824 592 aaKnown RBP22.4■■□□□ 1.18
CXXC1-212ENST00000589940 NFATC2IPQ8NCF5 419 aa22.4■■□□□ 1.18
CXXC1-212ENST00000589940 SOS1Q07889 1333 aaPredicted RBP22.4■■□□□ 1.18
CXXC1-212ENST00000589940 ERVV-2B6SEH9 535 aa22.39■■□□□ 1.18
CXXC1-212ENST00000589940 FRAT1Q92837 279 aaPredicted RBP22.39■■□□□ 1.18
CXXC1-212ENST00000589940 BRPF1P55201 1214 aaPredicted RBP22.39■■□□□ 1.17
CXXC1-212ENST00000589940 EIF4A1P60842 406 aaKnown RBP22.39■■□□□ 1.17
CXXC1-212ENST00000589940 AFF2P51816 1311 aa22.39■■□□□ 1.17
CXXC1-212ENST00000589940 CABP4P57796 275 aa22.38■■□□□ 1.17
CXXC1-212ENST00000589940 DDB1Q16531 1140 aa22.38■■□□□ 1.17
CXXC1-212ENST00000589940 KIF16BQ96L93 1317 aa22.38■■□□□ 1.17
CXXC1-212ENST00000589940 KCNQ3O43525 872 aa22.37■■□□□ 1.17
CXXC1-212ENST00000589940 C20orf194Q5TEA3 1177 aa22.37■■□□□ 1.17
CXXC1-212ENST00000589940 PDE3AQ14432 1141 aa22.36■■□□□ 1.17
CXXC1-212ENST00000589940 MRPL50Q8N5N7 158 aaKnown RBP22.36■■□□□ 1.17
CXXC1-212ENST00000589940 FAM98CQ17RN3 349 aaKnown RBP22.35■■□□□ 1.17
CXXC1-212ENST00000589940 ZKSCAN2Q63HK3 967 aa22.35■■□□□ 1.17
CXXC1-212ENST00000589940 ZNF790Q6PG37 636 aa22.35■■□□□ 1.17
CXXC1-212ENST00000589940 HOXB7P09629 217 aa22.34■■□□□ 1.17
CXXC1-212ENST00000589940 NOB1Q9ULX3 412 aaKnown RBP22.34■■□□□ 1.17
CXXC1-212ENST00000589940 TCERG1O14776 1098 aaKnown RBP22.33■■□□□ 1.17
CXXC1-212ENST00000589940 HEG1Q9ULI3 1381 aa22.33■■□□□ 1.16
CXXC1-212ENST00000589940 IPO8O15397 1037 aaKnown RBP22.33■■□□□ 1.16
CXXC1-212ENST00000589940 SLC39A6Q13433 755 aa22.33■■□□□ 1.16
CXXC1-212ENST00000589940 TOGARAM1Q9Y4F4 1720 aa22.33■■□□□ 1.16
CXXC1-212ENST00000589940 ATRNO75882 1429 aa22.32■■□□□ 1.16
CXXC1-212ENST00000589940 EXOC6Q8TAG9 804 aa22.31■■□□□ 1.16
CXXC1-212ENST00000589940 CRBNQ96SW2 442 aa22.31■■□□□ 1.16
CXXC1-212ENST00000589940 TRPC5Q9UL62 973 aaPredicted RBP22.31■■□□□ 1.16
CXXC1-212ENST00000589940 CCDC30Q5VVM6 783 aa22.31■■□□□ 1.16
CXXC1-212ENST00000589940 ATF7IPQ6VMQ6 1270 aa22.31■■□□□ 1.16
CXXC1-212ENST00000589940 TTC5Q8N0Z6 440 aa22.31■■□□□ 1.16
CXXC1-212ENST00000589940 GJD4Q96KN9 370 aaPredicted RBP22.31■■□□□ 1.16
CXXC1-212ENST00000589940 MS4A1P11836 297 aa22.3■■□□□ 1.16
CXXC1-212ENST00000589940 CHMP4AQ9BY43 222 aa22.3■■□□□ 1.16
CXXC1-212ENST00000589940 TRIM27P14373 513 aa22.3■■□□□ 1.16
CXXC1-212ENST00000589940 FBXO41Q8TF61 875 aa22.3■■□□□ 1.16
CXXC1-212ENST00000589940 TMOD3Q9NYL9 352 aa22.3■■□□□ 1.16
CXXC1-212ENST00000589940 GLI3P10071 1580 aa22.29■■□□□ 1.16
CXXC1-212ENST00000589940 GIGYF1O75420 1035 aaPredicted RBP22.29■■□□□ 1.16
CXXC1-212ENST00000589940 ARHGAP45Q92619 1136 aa22.29■■□□□ 1.16
CXXC1-212ENST00000589940 HDGFL1Q5TGJ6 251 aa22.29■■□□□ 1.16
CXXC1-212ENST00000589940 MARCH10Q8NA82 808 aaPredicted RBP22.29■■□□□ 1.16
CXXC1-212ENST00000589940 PANK1Q8TE04 598 aa22.29■■□□□ 1.16
CXXC1-212ENST00000589940 STK31Q9BXU1 1019 aa22.29■■□□□ 1.16
CXXC1-212ENST00000589940 PPP4R2Q9NY27 417 aa22.29■■□□□ 1.16
CXXC1-212ENST00000589940 TNNQ9UQP3 1299 aa22.28■■□□□ 1.16
CXXC1-212ENST00000589940 SLC4A2P04920 1241 aa22.27■■□□□ 1.16
CXXC1-212ENST00000589940 FTSJ3Q8IY81 847 aaKnown RBP22.27■■□□□ 1.16
CXXC1-212ENST00000589940 DZIP1LQ8IYY4 767 aaKnown RBP22.27■■□□□ 1.16
CXXC1-212ENST00000589940 THSD7AQ9UPZ6 1657 aa22.27■■□□□ 1.16
CXXC1-212ENST00000589940 RLBP1P12271 317 aa22.27■■□□□ 1.16
CXXC1-212ENST00000589940 CLUAP1Q96AJ1 413 aa22.27■■□□□ 1.16
CXXC1-212ENST00000589940 ZNF496Q96IT1 587 aaPredicted RBP22.27■■□□□ 1.16
CXXC1-212ENST00000589940 FMNL2Q96PY5 1086 aa22.26■■□□□ 1.15
CXXC1-212ENST00000589940 PAPPAQ13219 1627 aa22.26■■□□□ 1.15
CXXC1-212ENST00000589940 A0A0G2JS52 829 aa22.25■■□□□ 1.15
CXXC1-212ENST00000589940 MYT1Q01538 1121 aa22.25■■□□□ 1.15
CXXC1-212ENST00000589940 NECTIN2Q92692 538 aa22.25■■□□□ 1.15
CXXC1-212ENST00000589940 EIF2S2P20042 333 aaKnown RBP22.25■■□□□ 1.15
CXXC1-212ENST00000589940 PIGBQ92521 554 aa22.25■■□□□ 1.15
CXXC1-212ENST00000589940 QTRT2Q9H974 415 aaKnown RBP22.25■■□□□ 1.15
CXXC1-212ENST00000589940 BCL9O00512 1426 aa22.24■■□□□ 1.15
CXXC1-212ENST00000589940 COG6Q9Y2V7 657 aa22.24■■□□□ 1.15
CXXC1-212ENST00000589940 PTPRCP08575 1304 aa22.24■■□□□ 1.15
CXXC1-212ENST00000589940 ITGB4P16144 1822 aa22.23■■□□□ 1.15
CXXC1-212ENST00000589940 API5Q9BZZ5 524 aaKnown RBP22.23■■□□□ 1.15
CXXC1-212ENST00000589940 ONECUT3O60422 494 aaPredicted RBP22.23■■□□□ 1.15
CXXC1-212ENST00000589940 SNRPA1P09661 255 aaKnown RBP22.23■■□□□ 1.15
CXXC1-212ENST00000589940 UBR2Q8IWV8 1755 aa22.23■■□□□ 1.15
CXXC1-212ENST00000589940 DOT1LQ8TEK3 1739 aa22.22■■□□□ 1.15
CXXC1-212ENST00000589940 PRAMEF22A3QJZ6 481 aa22.22■■□□□ 1.15
CXXC1-212ENST00000589940 KCPQ6ZWJ8 1503 aa22.22■■□□□ 1.15
CXXC1-212ENST00000589940 CACNA1FO60840 1977 aa22.21■■□□□ 1.15
CXXC1-212ENST00000589940 PRIM1P49642 420 aaKnown RBP22.21■■□□□ 1.15
CXXC1-212ENST00000589940 MVPQ14764 893 aaKnown RBP22.21■■□□□ 1.15
CXXC1-212ENST00000589940 SYTL4Q96C24 671 aaPredicted RBP22.21■■□□□ 1.15
CXXC1-212ENST00000589940 C5P01031 1676 aa22.2■■□□□ 1.14
CXXC1-212ENST00000589940 ABCC4O15439 1325 aa22.2■■□□□ 1.14
CXXC1-212ENST00000589940 G2E3Q7L622 706 aa22.2■■□□□ 1.14
CXXC1-212ENST00000589940 CHPF2Q9P2E5 772 aa22.2■■□□□ 1.14
CXXC1-212ENST00000589940 DBF4Q9UBU7 674 aaPredicted RBP22.19■■□□□ 1.14
CXXC1-212ENST00000589940 RGS12O14924 1447 aa22.19■■□□□ 1.14
CXXC1-212ENST00000589940 FLIIQ13045 1269 aa22.19■■□□□ 1.14
CXXC1-212ENST00000589940 ZNF772Q68DY9 489 aaPredicted RBP22.19■■□□□ 1.14
CXXC1-212ENST00000589940 ATG3Q9NT62 314 aa22.19■■□□□ 1.14
CXXC1-212ENST00000589940 ASAP1Q9ULH1 1129 aa22.19■■□□□ 1.14
CXXC1-212ENST00000589940 TMEM57Q8N5G2 664 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms