RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 SMIM5Q71RC9 77 aa32.52■■■□□ 2.8
LSM7-205ENST00000589532 KNSTRNQ9Y448 316 aa32.52■■■□□ 2.8
LSM7-205ENST00000589532 CICQ96RK0 1608 aaPredicted RBP32.51■■■□□ 2.8
LSM7-205ENST00000589532 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.51■■■□□ 2.79
LSM7-205ENST00000589532 ERVV-2B6SEH9 535 aa32.5■■■□□ 2.79
LSM7-205ENST00000589532 DCAF5Q96JK2 942 aa32.5■■■□□ 2.79
LSM7-205ENST00000589532 SLC4A9Q96Q91 983 aa32.49■■■□□ 2.79
LSM7-205ENST00000589532 PHF14O94880 888 aa32.48■■■□□ 2.79
LSM7-205ENST00000589532 HSP90AB1P08238 724 aaKnown RBP32.48■■■□□ 2.79
LSM7-205ENST00000589532 IL13P35225 146 aa32.48■■■□□ 2.79
LSM7-205ENST00000589532 PLEKHO1Q53GL0 409 aaPredicted RBP32.48■■■□□ 2.79
LSM7-205ENST00000589532 SCN11AQ9UI33 1791 aa32.47■■■□□ 2.79
LSM7-205ENST00000589532 YBX3P16989 372 aaKnown RBP eCLIP32.47■■■□□ 2.79
LSM7-205ENST00000589532 ATP6V1AP38606 617 aa32.47■■■□□ 2.79
LSM7-205ENST00000589532 AMOTQ4VCS5 1084 aa32.47■■■□□ 2.79
LSM7-205ENST00000589532 ZNF530Q6P9A1 599 aaPredicted RBP32.47■■■□□ 2.79
LSM7-205ENST00000589532 CD2APQ9Y5K6 639 aa32.47■■■□□ 2.79
LSM7-205ENST00000589532 GNPATO15228 680 aa32.44■■■□□ 2.78
LSM7-205ENST00000589532 TJP1Q07157 1748 aa32.43■■■□□ 2.78
LSM7-205ENST00000589532 PER1O15534 1290 aaPredicted RBP32.43■■■□□ 2.78
LSM7-205ENST00000589532 C4AP0C0L4 1744 aa32.43■■■□□ 2.78
LSM7-205ENST00000589532 SULT6B1Q6IMI4 303 aa32.42■■■□□ 2.78
LSM7-205ENST00000589532 PELP1Q8IZL8 1130 aaKnown RBP32.42■■■□□ 2.78
LSM7-205ENST00000589532 MYH14Q7Z406 1995 aaKnown RBP32.41■■■□□ 2.78
LSM7-205ENST00000589532 ADAMTS7Q9UKP4 1686 aa32.41■■■□□ 2.78
LSM7-205ENST00000589532 KIAA1551Q9HCM1 1747 aa32.41■■■□□ 2.78
LSM7-205ENST00000589532 KIF13BQ9NQT8 1826 aa32.41■■■□□ 2.78
LSM7-205ENST00000589532 MRC1P22897 1456 aa32.41■■■□□ 2.78
LSM7-205ENST00000589532 CNTNAP4Q9C0A0 1308 aa32.38■■■□□ 2.77
LSM7-205ENST00000589532 VIRMAQ69YN4 1812 aaKnown RBP32.37■■■□□ 2.77
LSM7-205ENST00000589532 COL3A1P02461 1466 aaPredicted RBP32.37■■■□□ 2.77
LSM7-205ENST00000589532 GRIN3BO60391 1043 aa32.35■■■□□ 2.77
LSM7-205ENST00000589532 MTHFSP49914 203 aa32.35■■■□□ 2.77
LSM7-205ENST00000589532 CABP4P57796 275 aa32.35■■■□□ 2.77
LSM7-205ENST00000589532 C1orf141Q5JVX7 400 aa32.35■■■□□ 2.77
LSM7-205ENST00000589532 NPC1L1Q9UHC9 1359 aa32.34■■■□□ 2.77
LSM7-205ENST00000589532 RC3H1Q5TC82 1133 aaKnown RBP32.34■■■□□ 2.77
LSM7-205ENST00000589532 RBM42Q9BTD8 480 aaKnown RBP32.33■■■□□ 2.77
LSM7-205ENST00000589532 RTCBQ9Y3I0 505 aaKnown RBP32.31■■■□□ 2.76
LSM7-205ENST00000589532 ADRA2BP18089 450 aa32.3■■■□□ 2.76
LSM7-205ENST00000589532 NFATC2IPQ8NCF5 419 aa32.3■■■□□ 2.76
LSM7-205ENST00000589532 C10orf71Q711Q0 1435 aa32.29■■■□□ 2.76
LSM7-205ENST00000589532 PXDNLA1KZ92 1463 aa32.29■■■□□ 2.76
LSM7-205ENST00000589532 AKAP4Q5JQC9 854 aa32.28■■■□□ 2.76
LSM7-205ENST00000589532 RPS6KA4O75676 772 aa32.27■■■□□ 2.76
LSM7-205ENST00000589532 MMP10P09238 476 aa32.27■■■□□ 2.76
LSM7-205ENST00000589532 TRAPPC3LQ5T215 181 aa32.27■■■□□ 2.76
LSM7-205ENST00000589532 ARHGEF1Q92888 912 aaKnown RBP32.27■■■□□ 2.76
LSM7-205ENST00000589532 ADCY9O60503 1353 aa32.27■■■□□ 2.76
LSM7-205ENST00000589532 KCPQ6ZWJ8 1503 aa32.26■■■□□ 2.76
LSM7-205ENST00000589532 CC2D1BQ5T0F9 858 aaKnown RBP32.26■■■□□ 2.75
LSM7-205ENST00000589532 ZEB1P37275 1124 aaPredicted RBP32.25■■■□□ 2.75
LSM7-205ENST00000589532 UBR2Q8IWV8 1755 aa32.24■■■□□ 2.75
LSM7-205ENST00000589532 PTCD1O75127 700 aaKnown RBP32.24■■■□□ 2.75
LSM7-205ENST00000589532 HMOX1P09601 288 aa32.24■■■□□ 2.75
LSM7-205ENST00000589532 GYS1P13807 737 aa32.24■■■□□ 2.75
LSM7-205ENST00000589532 N4BP2Q86UW6 1770 aaPredicted RBP32.23■■■□□ 2.75
LSM7-205ENST00000589532 SLC52A2Q9HAB3 445 aa32.23■■■□□ 2.75
LSM7-205ENST00000589532 BRCA1P38398 1863 aaKnown RBP32.23■■■□□ 2.75
LSM7-205ENST00000589532 ATP10DQ9P241 1426 aa32.21■■■□□ 2.75
LSM7-205ENST00000589532 DIAPH1O60610 1272 aaKnown RBP32.21■■■□□ 2.75
LSM7-205ENST00000589532 CRKLP46109 303 aaKnown RBP32.21■■■□□ 2.75
LSM7-205ENST00000589532 NLGN1Q8N2Q7 840 aa32.21■■■□□ 2.75
LSM7-205ENST00000589532 LGR6Q9HBX8 967 aa32.21■■■□□ 2.75
LSM7-205ENST00000589532 C1QTNF8P60827 252 aa32.2■■■□□ 2.75
LSM7-205ENST00000589532 MTHFSDQ2M296 383 aaKnown RBP32.19■■■□□ 2.74
LSM7-205ENST00000589532 RNMTO43148 476 aaKnown RBP32.18■■■□□ 2.74
LSM7-205ENST00000589532 SIPA1L3O60292 1781 aaPredicted RBP32.17■■■□□ 2.74
LSM7-205ENST00000589532 RFC4P35249 363 aa32.16■■■□□ 2.74
LSM7-205ENST00000589532 USP42Q9H9J4 1324 aaKnown RBP32.16■■■□□ 2.74
LSM7-205ENST00000589532 INTS5Q6P9B9 1019 aaKnown RBP32.15■■■□□ 2.74
LSM7-205ENST00000589532 WWC3Q9ULE0 1092 aa32.15■■■□□ 2.74
LSM7-205ENST00000589532 GIGYF1O75420 1035 aaPredicted RBP32.14■■■□□ 2.74
LSM7-205ENST00000589532 DNAJC10Q8IXB1 793 aa32.12■■■□□ 2.73
LSM7-205ENST00000589532 SRP68Q9UHB9 627 aaKnown RBP32.12■■■□□ 2.73
LSM7-205ENST00000589532 CEP350Q5VT06 3117 aa32.12■■■□□ 2.73
LSM7-205ENST00000589532 TGFB2P61812 414 aa32.11■■■□□ 2.73
LSM7-205ENST00000589532 SLC39A6Q13433 755 aa32.1■■■□□ 2.73
LSM7-205ENST00000589532 SOS1Q07889 1333 aaPredicted RBP32.09■■■□□ 2.73
LSM7-205ENST00000589532 CCDC87Q9NVE4 849 aa32.09■■■□□ 2.73
LSM7-205ENST00000589532 CYP19A1P11511 503 aaPredicted RBP32.08■■■□□ 2.73
LSM7-205ENST00000589532 DDR1Q08345 913 aa32.08■■■□□ 2.73
LSM7-205ENST00000589532 FKBP8Q14318 412 aa32.08■■■□□ 2.73
LSM7-205ENST00000589532 ARFGEF1Q9Y6D6 1849 aa32.07■■■□□ 2.73
LSM7-205ENST00000589532 NRXN2Q9P2S2 1712 aa32.06■■■□□ 2.72
LSM7-205ENST00000589532 PARP3Q9Y6F1 533 aa32.06■■■□□ 2.72
LSM7-205ENST00000589532 A0A0G2JLW4 131 aa32.04■■■□□ 2.72
LSM7-205ENST00000589532 DPEP1P16444 411 aa32.03■■■□□ 2.72
LSM7-205ENST00000589532 VSIG10Q8N0Z9 540 aa32.03■■■□□ 2.72
LSM7-205ENST00000589532 ZBTB1Q9Y2K1 713 aa32.03■■■□□ 2.72
LSM7-205ENST00000589532 COL15A1P39059 1388 aa32.03■■■□□ 2.72
LSM7-205ENST00000589532 AFDNP55196 1824 aaKnown RBP32.03■■■□□ 2.72
LSM7-205ENST00000589532 SENP3-EIF4A1A0A087X0R7 540 aa32.02■■■□□ 2.72
LSM7-205ENST00000589532 U2SURPO15042 1029 aaKnown RBP32.02■■■□□ 2.72
LSM7-205ENST00000589532 KCNA3P22001 575 aa32.02■■■□□ 2.72
LSM7-205ENST00000589532 CNGB1Q14028 1251 aaPredicted RBP32.01■■■□□ 2.71
LSM7-205ENST00000589532 CEMIPQ8WUJ3 1361 aa32.01■■■□□ 2.71
LSM7-205ENST00000589532 POLRMTO00411 1230 aaKnown RBP32■■■□□ 2.71
LSM7-205ENST00000589532 IL17REQ8NFR9 667 aa32■■■□□ 2.71
LSM7-205ENST00000589532 SCN7AQ01118 1682 aa31.99■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms