RNA–Protein interactions for RNA: ENST00000589162.1

CAPNS1-208, Transcript of calpain small subunit 1, humanhuman

TSL 3

Gene CAPNS1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-208ENST00000589162 NRG2O14511 850 aaPredicted RBP8.16□□□□□ -1.1
CAPNS1-208ENST00000589162 NSD2O96028 1365 aa8.16□□□□□ -1.1
CAPNS1-208ENST00000589162 MAP2P11137 1827 aaKnown RBP8.16□□□□□ -1.1
CAPNS1-208ENST00000589162 HSPA1LP34931 641 aa8.16□□□□□ -1.1
CAPNS1-208ENST00000589162 MTHFSP49914 203 aa8.16□□□□□ -1.1
CAPNS1-208ENST00000589162 RALBP1Q15311 655 aa8.16□□□□□ -1.1
CAPNS1-208ENST00000589162 USP31Q70CQ4 1352 aa8.16□□□□□ -1.1
CAPNS1-208ENST00000589162 USP54Q70EL1 1684 aa8.16□□□□□ -1.1
CAPNS1-208ENST00000589162 MYBBP1AQ9BQG0 1328 aaKnown RBP8.16□□□□□ -1.1
CAPNS1-208ENST00000589162 LTN1O94822 1766 aa8.15□□□□□ -1.1
CAPNS1-208ENST00000589162 ZC3H6P61129 1189 aaKnown RBP8.15□□□□□ -1.1
CAPNS1-208ENST00000589162 CHRNA2Q15822 529 aa8.15□□□□□ -1.1
CAPNS1-208ENST00000589162 MRS2Q9HD23 443 aa8.15□□□□□ -1.1
CAPNS1-208ENST00000589162 SLIT3O75094 1523 aa8.14□□□□□ -1.11
CAPNS1-208ENST00000589162 NFAT5O94916 1531 aa8.14□□□□□ -1.11
CAPNS1-208ENST00000589162 PNPLA6Q8IY17 1366 aa8.14□□□□□ -1.11
CAPNS1-208ENST00000589162 USP19O94966 1318 aa8.14□□□□□ -1.11
CAPNS1-208ENST00000589162 MAP3K19Q56UN5 1328 aa8.14□□□□□ -1.11
CAPNS1-208ENST00000589162 NUTM2BA6NNL0 878 aaPredicted RBP8.14□□□□□ -1.11
CAPNS1-208ENST00000589162 NUTM2EB1AL46 878 aaPredicted RBP8.14□□□□□ -1.11
CAPNS1-208ENST00000589162 ONECUT3O60422 494 aaPredicted RBP8.14□□□□□ -1.11
CAPNS1-208ENST00000589162 NLRP13Q86W25 1043 aa8.14□□□□□ -1.11
CAPNS1-208ENST00000589162 NUTM2AQ8IVF1 878 aaPredicted RBP8.14□□□□□ -1.11
CAPNS1-208ENST00000589162 POLKQ9UBT6 870 aa8.14□□□□□ -1.11
CAPNS1-208ENST00000589162 RGPD5Q99666 1765 aa8.14□□□□□ -1.11
CAPNS1-208ENST00000589162 PPP1R3GB7ZBB8 358 aa8.13□□□□□ -1.11
CAPNS1-208ENST00000589162 ECM2O94769 699 aaPredicted RBP8.13□□□□□ -1.11
CAPNS1-208ENST00000589162 GCP02774 474 aa8.13□□□□□ -1.11
CAPNS1-208ENST00000589162 LTV1Q96GA3 475 aaPredicted RBP8.13□□□□□ -1.11
CAPNS1-208ENST00000589162 SHPRHQ149N8 1683 aa8.13□□□□□ -1.11
CAPNS1-208ENST00000589162 COL3A1P02461 1466 aaPredicted RBP8.13□□□□□ -1.11
CAPNS1-208ENST00000589162 BRD4O60885 1362 aaPredicted RBP8.12□□□□□ -1.11
CAPNS1-208ENST00000589162 HAP1P54257 671 aaPredicted RBP8.12□□□□□ -1.11
CAPNS1-208ENST00000589162 HSP90AB2PQ58FF8 381 aa8.12□□□□□ -1.11
CAPNS1-208ENST00000589162 FAM9BQ8IZU0 186 aa8.12□□□□□ -1.11
CAPNS1-208ENST00000589162 YTHDC1Q96MU7 727 aaKnown RBP8.12□□□□□ -1.11
CAPNS1-208ENST00000589162 RGPD2P0DJD1 1756 aa8.12□□□□□ -1.11
CAPNS1-208ENST00000589162 ARHGEF10O15013 1369 aa8.11□□□□□ -1.11
CAPNS1-208ENST00000589162 KIAA0232Q92628 1395 aa8.11□□□□□ -1.11
CAPNS1-208ENST00000589162 ADAMTS2O95450 1211 aa8.11□□□□□ -1.11
CAPNS1-208ENST00000589162 AMPHP49418 695 aa8.11□□□□□ -1.11
CAPNS1-208ENST00000589162 ZNF787Q6DD87 383 aa8.11□□□□□ -1.11
CAPNS1-208ENST00000589162 LRRC59Q96AG4 307 aaKnown RBP8.11□□□□□ -1.11
CAPNS1-208ENST00000589162 LRP6O75581 1613 aa8.11□□□□□ -1.11
CAPNS1-208ENST00000589162 COL22A1Q8NFW1 1626 aaPredicted RBP8.11□□□□□ -1.11
CAPNS1-208ENST00000589162 AATKQ6ZMQ8 1374 aa8.1□□□□□ -1.11
CAPNS1-208ENST00000589162 COL18A1P39060 1754 aa8.1□□□□□ -1.11
CAPNS1-208ENST00000589162 CCER2I3L3R5 266 aa8.1□□□□□ -1.11
CAPNS1-208ENST00000589162 RYDENQ9NUL5 291 aaKnown RBP8.1□□□□□ -1.11
CAPNS1-208ENST00000589162 SMG6Q86US8 1419 aaKnown RBP8.1□□□□□ -1.11
CAPNS1-208ENST00000589162 CDK12Q9NYV4 1490 aaPredicted RBP8.09□□□□□ -1.11
CAPNS1-208ENST00000589162 U2SURPO15042 1029 aaKnown RBP8.09□□□□□ -1.11
CAPNS1-208ENST00000589162 HOXC9P31274 260 aa8.09□□□□□ -1.11
CAPNS1-208ENST00000589162 EIF4A2Q14240 407 aaKnown RBP8.09□□□□□ -1.11
CAPNS1-208ENST00000589162 ARHGEF25Q86VW2 580 aa8.09□□□□□ -1.11
CAPNS1-208ENST00000589162 CCDC146Q8IYE0 955 aa8.09□□□□□ -1.11
CAPNS1-208ENST00000589162 USHBP1Q8N6Y0 703 aa8.09□□□□□ -1.11
CAPNS1-208ENST00000589162 UPF1Q92900 1129 aaKnown RBP eCLIP8.09□□□□□ -1.11
CAPNS1-208ENST00000589162 PRDM11Q9NQV5 511 aa8.09□□□□□ -1.11
CAPNS1-208ENST00000589162 V9GY48 417 aaPredicted RBP8.09□□□□□ -1.11
CAPNS1-208ENST00000589162 FAM83GA6ND36 823 aa8.08□□□□□ -1.12
CAPNS1-208ENST00000589162 HMOX1P09601 288 aa8.08□□□□□ -1.12
CAPNS1-208ENST00000589162 AEBP1Q8IUX7 1158 aa8.08□□□□□ -1.12
CAPNS1-208ENST00000589162 PNISRQ8TF01 805 aaKnown RBP8.08□□□□□ -1.12
CAPNS1-208ENST00000589162 FBXW7Q969H0 707 aa8.08□□□□□ -1.12
CAPNS1-208ENST00000589162 ZFRQ96KR1 1074 aaKnown RBP8.08□□□□□ -1.12
CAPNS1-208ENST00000589162 ADAM33Q9BZ11 813 aa8.08□□□□□ -1.12
CAPNS1-208ENST00000589162 ADAMTS8Q9UP79 889 aa8.08□□□□□ -1.12
CAPNS1-208ENST00000589162 JCADQ9P266 1359 aa8.08□□□□□ -1.12
CAPNS1-208ENST00000589162 PLCH1Q4KWH8 1693 aa8.08□□□□□ -1.12
CAPNS1-208ENST00000589162 LMO7Q8WWI1 1683 aa8.08□□□□□ -1.12
CAPNS1-208ENST00000589162 CAMTA1Q9Y6Y1 1673 aa8.08□□□□□ -1.12
CAPNS1-208ENST00000589162 EVI5O60447 810 aa8.07□□□□□ -1.12
CAPNS1-208ENST00000589162 DIAPH1O60610 1272 aaKnown RBP8.07□□□□□ -1.12
CAPNS1-208ENST00000589162 IL13P35225 146 aa8.07□□□□□ -1.12
CAPNS1-208ENST00000589162 KCNH5Q8NCM2 988 aa8.07□□□□□ -1.12
CAPNS1-208ENST00000589162 IP6K1Q92551 441 aa8.07□□□□□ -1.12
CAPNS1-208ENST00000589162 CFAP53Q96M91 514 aa8.07□□□□□ -1.12
CAPNS1-208ENST00000589162 STRN4Q9NRL3 753 aa8.07□□□□□ -1.12
CAPNS1-208ENST00000589162 TSR3Q9UJK0 312 aaKnown RBP8.07□□□□□ -1.12
CAPNS1-208ENST00000589162 FLT4P35916 1363 aa8.07□□□□□ -1.12
CAPNS1-208ENST00000589162 U2AF1L5P0DN76 240 aaPredicted RBP8.06□□□□□ -1.12
CAPNS1-208ENST00000589162 BCAMP50895 628 aa8.06□□□□□ -1.12
CAPNS1-208ENST00000589162 U2AF1Q01081 240 aaKnown RBP eCLIP8.06□□□□□ -1.12
CAPNS1-208ENST00000589162 ANKRD24Q8TF21 1146 aa8.06□□□□□ -1.12
CAPNS1-208ENST00000589162 WBP1LQ9NX94 342 aa8.06□□□□□ -1.12
CAPNS1-208ENST00000589162 SALL2Q9Y467 1007 aaPredicted RBP8.06□□□□□ -1.12
CAPNS1-208ENST00000589162 RGPD1P0DJD0 1748 aa8.06□□□□□ -1.12
CAPNS1-208ENST00000589162 LCE2BO14633 110 aa8.05□□□□□ -1.12
CAPNS1-208ENST00000589162 WDR43Q15061 677 aaKnown RBP eCLIP8.05□□□□□ -1.12
CAPNS1-208ENST00000589162 PPP1R15BQ5SWA1 713 aa8.05□□□□□ -1.12
CAPNS1-208ENST00000589162 NBPF6Q5VWK0 638 aa8.05□□□□□ -1.12
CAPNS1-208ENST00000589162 FBXO41Q8TF61 875 aa8.05□□□□□ -1.12
CAPNS1-208ENST00000589162 NBPF4Q96M43 638 aa8.05□□□□□ -1.12
CAPNS1-208ENST00000589162 C8orf37Q96NL8 207 aa8.05□□□□□ -1.12
CAPNS1-208ENST00000589162 EYA1Q99502 592 aa8.05□□□□□ -1.12
CAPNS1-208ENST00000589162 RRP7AQ9Y3A4 280 aaKnown RBP8.05□□□□□ -1.12
CAPNS1-208ENST00000589162 CPDO75976 1380 aa8.05□□□□□ -1.12
CAPNS1-208ENST00000589162 INSRP06213 1382 aa8.05□□□□□ -1.12
CAPNS1-208ENST00000589162 COL14A1Q05707 1796 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms