RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 NMRK2Q9NPI5 230 aa21.05■□□□□ 0.96
SF3A2-204ENST00000589118 NCAPD2Q15021 1401 aa21.04■□□□□ 0.96
SF3A2-204ENST00000589118 ARHGAP27Q6ZUM4 889 aa21.04■□□□□ 0.96
SF3A2-204ENST00000589118 KIF24Q5T7B8 1368 aa21.03■□□□□ 0.96
SF3A2-204ENST00000589118 DPEP1P16444 411 aa21.03■□□□□ 0.96
SF3A2-204ENST00000589118 HTRA3P83110 453 aa21.03■□□□□ 0.96
SF3A2-204ENST00000589118 DNAJC5GQ8N7S2 189 aa21.03■□□□□ 0.96
SF3A2-204ENST00000589118 RBM42Q9BTD8 480 aaKnown RBP21.03■□□□□ 0.96
SF3A2-204ENST00000589118 ANKRD26Q9UPS8 1709 aa21.02■□□□□ 0.96
SF3A2-204ENST00000589118 HMGB2P26583 209 aaKnown RBP21.02■□□□□ 0.96
SF3A2-204ENST00000589118 SLC24A1O60721 1099 aa21.01■□□□□ 0.95
SF3A2-204ENST00000589118 TNNT2P45379 298 aaPredicted RBP21.01■□□□□ 0.95
SF3A2-204ENST00000589118 TRAPPC3LQ5T215 181 aa21.01■□□□□ 0.95
SF3A2-204ENST00000589118 IFNL2Q8IZJ0 200 aa21.01■□□□□ 0.95
SF3A2-204ENST00000589118 ARHGEF1Q92888 912 aaKnown RBP21.01■□□□□ 0.95
SF3A2-204ENST00000589118 WASHC2AQ641Q2 1341 aa21.01■□□□□ 0.95
SF3A2-204ENST00000589118 POLKQ9UBT6 870 aa21■□□□□ 0.95
SF3A2-204ENST00000589118 BRCA1P38398 1863 aaKnown RBP20.99■□□□□ 0.95
SF3A2-204ENST00000589118 TOMM70O94826 608 aa20.99■□□□□ 0.95
SF3A2-204ENST00000589118 FCHSD2O94868 740 aa20.99■□□□□ 0.95
SF3A2-204ENST00000589118 APLP1P51693 650 aa20.99■□□□□ 0.95
SF3A2-204ENST00000589118 RTCBQ9Y3I0 505 aaKnown RBP20.99■□□□□ 0.95
SF3A2-204ENST00000589118 MYH14Q7Z406 1995 aaKnown RBP20.99■□□□□ 0.95
SF3A2-204ENST00000589118 C4AP0C0L4 1744 aa20.98■□□□□ 0.95
SF3A2-204ENST00000589118 TGFB2P61812 414 aa20.98■□□□□ 0.95
SF3A2-204ENST00000589118 COL5A3P25940 1745 aaPredicted RBP20.98■□□□□ 0.95
SF3A2-204ENST00000589118 KDRP35968 1356 aa20.97■□□□□ 0.95
SF3A2-204ENST00000589118 C10orf71Q711Q0 1435 aa20.97■□□□□ 0.95
SF3A2-204ENST00000589118 GYS1P13807 737 aa20.97■□□□□ 0.95
SF3A2-204ENST00000589118 EIF4A2Q14240 407 aaKnown RBP20.97■□□□□ 0.95
SF3A2-204ENST00000589118 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.97■□□□□ 0.95
SF3A2-204ENST00000589118 KCNA3P22001 575 aa20.96■□□□□ 0.95
SF3A2-204ENST00000589118 NLGN1Q8N2Q7 840 aa20.96■□□□□ 0.95
SF3A2-204ENST00000589118 WDR90Q96KV7 1748 aa20.95■□□□□ 0.94
SF3A2-204ENST00000589118 C9orf131Q5VYM1 1079 aa20.95■□□□□ 0.94
SF3A2-204ENST00000589118 SRP68Q9UHB9 627 aaKnown RBP20.95■□□□□ 0.94
SF3A2-204ENST00000589118 POLR3GLQ9BT43 218 aa20.94■□□□□ 0.94
SF3A2-204ENST00000589118 CCDC87Q9NVE4 849 aa20.94■□□□□ 0.94
SF3A2-204ENST00000589118 RFC4P35249 363 aa20.93■□□□□ 0.94
SF3A2-204ENST00000589118 PARP3Q9Y6F1 533 aa20.93■□□□□ 0.94
SF3A2-204ENST00000589118 PTCD1O75127 700 aaKnown RBP20.92■□□□□ 0.94
SF3A2-204ENST00000589118 RPS6KA4O75676 772 aa20.92■□□□□ 0.94
SF3A2-204ENST00000589118 ARFGEF1Q9Y6D6 1849 aa20.92■□□□□ 0.94
SF3A2-204ENST00000589118 CDCA8Q53HL2 280 aa20.91■□□□□ 0.94
SF3A2-204ENST00000589118 KCPQ6ZWJ8 1503 aa20.91■□□□□ 0.94
SF3A2-204ENST00000589118 KDM6AO15550 1401 aaPredicted RBP20.9■□□□□ 0.94
SF3A2-204ENST00000589118 CHRNA5P30532 468 aa20.9■□□□□ 0.94
SF3A2-204ENST00000589118 RC3H1Q5TC82 1133 aaKnown RBP20.9■□□□□ 0.94
SF3A2-204ENST00000589118 RRAGCQ9HB90 399 aa20.9■□□□□ 0.94
SF3A2-204ENST00000589118 ERVV-2B6SEH9 535 aa20.89■□□□□ 0.93
SF3A2-204ENST00000589118 DDR1Q08345 913 aa20.89■□□□□ 0.93
SF3A2-204ENST00000589118 FKBP8Q14318 412 aa20.89■□□□□ 0.93
SF3A2-204ENST00000589118 COL13A1Q5TAT6 717 aaPredicted RBP20.89■□□□□ 0.93
SF3A2-204ENST00000589118 ZNF831Q5JPB2 1677 aa20.89■□□□□ 0.93
SF3A2-204ENST00000589118 SBF1O95248 1867 aa20.88■□□□□ 0.93
SF3A2-204ENST00000589118 CNTNAP4Q9C0A0 1308 aa20.88■□□□□ 0.93
SF3A2-204ENST00000589118 CABP4P57796 275 aa20.88■□□□□ 0.93
SF3A2-204ENST00000589118 CAPN15O75808 1086 aa20.87■□□□□ 0.93
SF3A2-204ENST00000589118 ZNF530Q6P9A1 599 aaPredicted RBP20.87■□□□□ 0.93
SF3A2-204ENST00000589118 AEBP1Q8IUX7 1158 aa20.87■□□□□ 0.93
SF3A2-204ENST00000589118 RBM46Q8TBY0 533 aaKnown RBP20.87■□□□□ 0.93
SF3A2-204ENST00000589118 DCAF5Q96JK2 942 aa20.87■□□□□ 0.93
SF3A2-204ENST00000589118 RNF181Q9P0P0 153 aa20.87■□□□□ 0.93
SF3A2-204ENST00000589118 PIM2Q9P1W9 311 aa20.87■□□□□ 0.93
SF3A2-204ENST00000589118 ADRA2BP18089 450 aa20.86■□□□□ 0.93
SF3A2-204ENST00000589118 CRKLP46109 303 aaKnown RBP20.86■□□□□ 0.93
SF3A2-204ENST00000589118 C16orf71Q8IYS4 520 aaPredicted RBP20.86■□□□□ 0.93
SF3A2-204ENST00000589118 TJP1Q07157 1748 aa20.86■□□□□ 0.93
SF3A2-204ENST00000589118 NFATC2IPQ8NCF5 419 aa20.85■□□□□ 0.93
SF3A2-204ENST00000589118 PLEKHO1Q53GL0 409 aaPredicted RBP20.84■□□□□ 0.93
SF3A2-204ENST00000589118 DALRD3Q5D0E6 543 aaKnown RBP20.84■□□□□ 0.93
SF3A2-204ENST00000589118 KLRG1Q96E93 195 aa20.84■□□□□ 0.93
SF3A2-204ENST00000589118 MTHFSP49914 203 aa20.83■□□□□ 0.93
SF3A2-204ENST00000589118 RASSF7Q02833 373 aa20.82■□□□□ 0.92
SF3A2-204ENST00000589118 ADAMTS7Q9UKP4 1686 aa20.82■□□□□ 0.92
SF3A2-204ENST00000589118 USP42Q9H9J4 1324 aaKnown RBP20.81■□□□□ 0.92
SF3A2-204ENST00000589118 HSP90AB1P08238 724 aaKnown RBP20.81■□□□□ 0.92
SF3A2-204ENST00000589118 PRELPP51888 382 aa20.81■□□□□ 0.92
SF3A2-204ENST00000589118 INTS5Q6P9B9 1019 aaKnown RBP20.81■□□□□ 0.92
SF3A2-204ENST00000589118 CCDC88AQ3V6T2 1871 aa20.8■□□□□ 0.92
SF3A2-204ENST00000589118 POLRMTO00411 1230 aaKnown RBP20.8■□□□□ 0.92
SF3A2-204ENST00000589118 AFDNP55196 1824 aaKnown RBP20.8■□□□□ 0.92
SF3A2-204ENST00000589118 TM4SF1P30408 202 aa20.79■□□□□ 0.92
SF3A2-204ENST00000589118 USPL1Q5W0Q7 1092 aa20.79■□□□□ 0.92
SF3A2-204ENST00000589118 DNAJC10Q8IXB1 793 aa20.79■□□□□ 0.92
SF3A2-204ENST00000589118 JMYQ8N9B5 988 aa20.79■□□□□ 0.92
SF3A2-204ENST00000589118 KDM2BQ8NHM5 1336 aa20.78■□□□□ 0.92
SF3A2-204ENST00000589118 PLEKHG2Q9H7P9 1386 aa20.78■□□□□ 0.92
SF3A2-204ENST00000589118 FSTL1Q12841 308 aa20.78■□□□□ 0.92
SF3A2-204ENST00000589118 C1orf141Q5JVX7 400 aa20.77■□□□□ 0.92
SF3A2-204ENST00000589118 SCN11AQ9UI33 1791 aa20.77■□□□□ 0.91
SF3A2-204ENST00000589118 TNRC6CQ9HCJ0 1690 aaKnown RBP20.77■□□□□ 0.91
SF3A2-204ENST00000589118 AMOTQ4VCS5 1084 aa20.76■□□□□ 0.91
SF3A2-204ENST00000589118 SULT6B1Q6IMI4 303 aa20.76■□□□□ 0.91
SF3A2-204ENST00000589118 PANK3Q9H999 370 aa20.76■□□□□ 0.91
SF3A2-204ENST00000589118 LGR6Q9HBX8 967 aa20.76■□□□□ 0.91
SF3A2-204ENST00000589118 SLC39A6Q13433 755 aa20.75■□□□□ 0.91
SF3A2-204ENST00000589118 VIRMAQ69YN4 1812 aaKnown RBP20.74■□□□□ 0.91
SF3A2-204ENST00000589118 NFIXQ14938 502 aa20.73■□□□□ 0.91
SF3A2-204ENST00000589118 ZPR1O75312 459 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms