RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, human

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAMP4-210	ENST00000588555	FRAT1	Q92837	279 aa	Predicted RBP	33.45	■■■□□ 2.95
SCAMP4-210	ENST00000588555	NGLY1	Q96IV0	654 aa		33.45	■■■□□ 2.95
SCAMP4-210	ENST00000588555	SLC52A2	Q9HAB3	445 aa		33.45	■■■□□ 2.95
SCAMP4-210	ENST00000588555	THRAP3	Q9Y2W1	955 aa	Known RBP	33.45	■■■□□ 2.95
SCAMP4-210	ENST00000588555	BTBD11	A6QL63	1104 aa		33.44	■■■□□ 2.94
SCAMP4-210	ENST00000588555	EXOC6	Q8TAG9	804 aa		33.44	■■■□□ 2.94
SCAMP4-210	ENST00000588555	PDE3A	Q14432	1141 aa		33.43	■■■□□ 2.94
SCAMP4-210	ENST00000588555	CANX	P27824	592 aa	Known RBP	33.42	■■■□□ 2.94
SCAMP4-210	ENST00000588555	MRPL50	Q8N5N7	158 aa	Known RBP	33.42	■■■□□ 2.94
SCAMP4-210	ENST00000588555	CRBN	Q96SW2	442 aa		33.42	■■■□□ 2.94
SCAMP4-210	ENST00000588555	KIF16B	Q96L93	1317 aa		33.41	■■■□□ 2.94
SCAMP4-210	ENST00000588555	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.41	■■■□□ 2.94
SCAMP4-210	ENST00000588555	EIF4A1	P60842	406 aa	Known RBP	33.41	■■■□□ 2.94
SCAMP4-210	ENST00000588555	PPP4R2	Q9NY27	417 aa		33.41	■■■□□ 2.94
SCAMP4-210	ENST00000588555	KCNQ3	O43525	872 aa		33.4	■■■□□ 2.94
SCAMP4-210	ENST00000588555	DDX54	Q8TDD1	881 aa	Known RBP	33.4	■■■□□ 2.94
SCAMP4-210	ENST00000588555	SOS1	Q07889	1333 aa	Predicted RBP	33.4	■■■□□ 2.94
SCAMP4-210	ENST00000588555	ZKSCAN2	Q63HK3	967 aa		33.39	■■■□□ 2.94
SCAMP4-210	ENST00000588555	CDCA7	Q9BWT1	371 aa	Predicted RBP	33.39	■■■□□ 2.94
SCAMP4-210	ENST00000588555	TNS2	Q63HR2	1409 aa		33.38	■■■□□ 2.93
SCAMP4-210	ENST00000588555	NFATC2IP	Q8NCF5	419 aa		33.38	■■■□□ 2.93
SCAMP4-210	ENST00000588555	NOB1	Q9ULX3	412 aa	Known RBP	33.38	■■■□□ 2.93
SCAMP4-210	ENST00000588555	TNN	Q9UQP3	1299 aa		33.38	■■■□□ 2.93
SCAMP4-210	ENST00000588555	VPS72	Q15906	364 aa		33.37	■■■□□ 2.93
SCAMP4-210	ENST00000588555	TOGARAM1	Q9Y4F4	1720 aa		33.36	■■■□□ 2.93
SCAMP4-210	ENST00000588555	TCERG1	O14776	1098 aa	Known RBP	33.36	■■■□□ 2.93
SCAMP4-210	ENST00000588555	BARGIN	Q6ZT62	677 aa		33.36	■■■□□ 2.93
SCAMP4-210	ENST00000588555	HEG1	Q9ULI3	1381 aa		33.36	■■■□□ 2.93
SCAMP4-210	ENST00000588555	PANK1	Q8TE04	598 aa		33.34	■■■□□ 2.93
SCAMP4-210	ENST00000588555	ERVV-2	B6SEH9	535 aa		33.34	■■■□□ 2.93
SCAMP4-210	ENST00000588555	RLBP1	P12271	317 aa		33.34	■■■□□ 2.93
SCAMP4-210	ENST00000588555	TRIM27	P14373	513 aa		33.34	■■■□□ 2.93
SCAMP4-210	ENST00000588555	ATF7IP	Q6VMQ6	1270 aa		33.34	■■■□□ 2.93
SCAMP4-210	ENST00000588555	CCDC9	Q9Y3X0	531 aa	Known RBP	33.33	■■■□□ 2.93
SCAMP4-210	ENST00000588555	EXOC5	O00471	708 aa		33.32	■■■□□ 2.92
SCAMP4-210	ENST00000588555	CABP4	P57796	275 aa		33.32	■■■□□ 2.92
SCAMP4-210	ENST00000588555	HOXB7	P09629	217 aa		33.32	■■■□□ 2.92
SCAMP4-210	ENST00000588555	ZNF790	Q6PG37	636 aa		33.32	■■■□□ 2.92
SCAMP4-210	ENST00000588555	USP21	Q9UK80	565 aa		33.32	■■■□□ 2.92
SCAMP4-210	ENST00000588555	IPO8	O15397	1037 aa	Known RBP	33.31	■■■□□ 2.92
SCAMP4-210	ENST00000588555	MEX3C	Q5U5Q3	659 aa	Known RBP	33.3	■■■□□ 2.92
SCAMP4-210	ENST00000588555	ARHGAP45	Q92619	1136 aa		33.3	■■■□□ 2.92
SCAMP4-210	ENST00000588555	CLUAP1	Q96AJ1	413 aa		33.29	■■■□□ 2.92
SCAMP4-210	ENST00000588555	SLC39A6	Q13433	755 aa		33.29	■■■□□ 2.92
SCAMP4-210	ENST00000588555	DZIP1L	Q8IYY4	767 aa	Known RBP	33.29	■■■□□ 2.92
SCAMP4-210	ENST00000588555	PAPPA	Q13219	1627 aa		33.27	■■■□□ 2.92
SCAMP4-210	ENST00000588555	MS4A1	P11836	297 aa		33.27	■■■□□ 2.92
SCAMP4-210	ENST00000588555	COG6	Q9Y2V7	657 aa		33.26	■■■□□ 2.92
SCAMP4-210	ENST00000588555	DDB1	Q16531	1140 aa		33.26	■■■□□ 2.91
SCAMP4-210	ENST00000588555	CCDC30	Q5VVM6	783 aa		33.26	■■■□□ 2.91
SCAMP4-210	ENST00000588555	GIGYF1	O75420	1035 aa	Predicted RBP	33.25	■■■□□ 2.91
SCAMP4-210	ENST00000588555	AFF2	P51816	1311 aa		33.25	■■■□□ 2.91
SCAMP4-210	ENST00000588555	FTSJ3	Q8IY81	847 aa	Known RBP	33.24	■■■□□ 2.91
SCAMP4-210	ENST00000588555	CACNA1F	O60840	1977 aa		33.24	■■■□□ 2.91
SCAMP4-210	ENST00000588555	GLI3	P10071	1580 aa		33.24	■■■□□ 2.91
SCAMP4-210	ENST00000588555	SLC4A2	P04920	1241 aa		33.24	■■■□□ 2.91
SCAMP4-210	ENST00000588555	B4GALNT3	Q6L9W6	998 aa		33.24	■■■□□ 2.91
SCAMP4-210	ENST00000588555	HDGFL1	Q5TGJ6	251 aa		33.23	■■■□□ 2.91
SCAMP4-210	ENST00000588555	UBR2	Q8IWV8	1755 aa		33.23	■■■□□ 2.91
SCAMP4-210	ENST00000588555	ITGB4	P16144	1822 aa		33.22	■■■□□ 2.91
SCAMP4-210	ENST00000588555	FAM98C	Q17RN3	349 aa	Known RBP	33.21	■■■□□ 2.91
SCAMP4-210	ENST00000588555	STK31	Q9BXU1	1019 aa		33.21	■■■□□ 2.91
SCAMP4-210	ENST00000588555	C5	P01031	1676 aa		33.21	■■■□□ 2.91
SCAMP4-210	ENST00000588555	RGS12	O14924	1447 aa		33.21	■■■□□ 2.91
SCAMP4-210	ENST00000588555	ZNF496	Q96IT1	587 aa	Predicted RBP	33.21	■■■□□ 2.91
SCAMP4-210	ENST00000588555	MVP	Q14764	893 aa	Known RBP	33.2	■■■□□ 2.91
SCAMP4-210	ENST00000588555	NECTIN2	Q92692	538 aa		33.2	■■■□□ 2.91
SCAMP4-210	ENST00000588555	TTC5	Q8N0Z6	440 aa		33.19	■■■□□ 2.9
SCAMP4-210	ENST00000588555	ABCC4	O15439	1325 aa		33.19	■■■□□ 2.9
SCAMP4-210	ENST00000588555	PTPRC	P08575	1304 aa		33.19	■■■□□ 2.9
SCAMP4-210	ENST00000588555	THSD7A	Q9UPZ6	1657 aa		33.19	■■■□□ 2.9
SCAMP4-210	ENST00000588555	CHMP4A	Q9BY43	222 aa		33.19	■■■□□ 2.9
SCAMP4-210	ENST00000588555	API5	Q9BZZ5	524 aa	Known RBP	33.19	■■■□□ 2.9
SCAMP4-210	ENST00000588555	ATRN	O75882	1429 aa		33.18	■■■□□ 2.9
SCAMP4-210	ENST00000588555	PRAMEF22	A3QJZ6	481 aa		33.18	■■■□□ 2.9
SCAMP4-210	ENST00000588555	G2E3	Q7L622	706 aa		33.18	■■■□□ 2.9
SCAMP4-210	ENST00000588555	TMEM57	Q8N5G2	664 aa		33.17	■■■□□ 2.9
SCAMP4-210	ENST00000588555	MARCH10	Q8NA82	808 aa	Predicted RBP	33.17	■■■□□ 2.9
SCAMP4-210	ENST00000588555	CCDC136	Q96JN2	1154 aa		33.17	■■■□□ 2.9
SCAMP4-210	ENST00000588555	KCP	Q6ZWJ8	1503 aa		33.17	■■■□□ 2.9
SCAMP4-210	ENST00000588555	DOT1L	Q8TEK3	1739 aa		33.17	■■■□□ 2.9
SCAMP4-210	ENST00000588555	EIF2S2	P20042	333 aa	Known RBP	33.16	■■■□□ 2.9
SCAMP4-210	ENST00000588555	TMOD3	Q9NYL9	352 aa		33.16	■■■□□ 2.9
SCAMP4-210	ENST00000588555	FMNL2	Q96PY5	1086 aa		33.16	■■■□□ 2.9
SCAMP4-210	ENST00000588555	BCL9	O00512	1426 aa		33.14	■■■□□ 2.9
SCAMP4-210	ENST00000588555	PIGB	Q92521	554 aa		33.14	■■■□□ 2.9
SCAMP4-210	ENST00000588555	GJD4	Q96KN9	370 aa	Predicted RBP	33.14	■■■□□ 2.9
SCAMP4-210	ENST00000588555	CHPF2	Q9P2E5	772 aa		33.12	■■■□□ 2.89
SCAMP4-210	ENST00000588555	FLII	Q13045	1269 aa		33.11	■■■□□ 2.89
SCAMP4-210	ENST00000588555	SNRPA1	P09661	255 aa	Known RBP	33.11	■■■□□ 2.89
SCAMP4-210	ENST00000588555	AAMP	Q13685	434 aa		33.11	■■■□□ 2.89
SCAMP4-210	ENST00000588555	ITPRIP	Q8IWB1	547 aa		33.11	■■■□□ 2.89
SCAMP4-210	ENST00000588555	TRPC5	Q9UL62	973 aa	Predicted RBP	33.11	■■■□□ 2.89
SCAMP4-210	ENST00000588555	LAMB4	A4D0S4	1761 aa		33.1	■■■□□ 2.89
SCAMP4-210	ENST00000588555	DDX19B	Q9UMR2	479 aa		33.1	■■■□□ 2.89
SCAMP4-210	ENST00000588555	DBF4	Q9UBU7	674 aa	Predicted RBP	33.09	■■■□□ 2.89
SCAMP4-210	ENST00000588555	PHAX	Q9H814	394 aa	Known RBP	33.06	■■■□□ 2.88
SCAMP4-210	ENST00000588555	ASAP1	Q9ULH1	1129 aa		33.06	■■■□□ 2.88
SCAMP4-210	ENST00000588555	ONECUT3	O60422	494 aa	Predicted RBP	33.05	■■■□□ 2.88
SCAMP4-210	ENST00000588555	PRIM1	P49642	420 aa	Known RBP	33.05	■■■□□ 2.88

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