RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 FRAT1Q92837 279 aaPredicted RBP33.45■■■□□ 2.95
SCAMP4-210ENST00000588555 NGLY1Q96IV0 654 aa33.45■■■□□ 2.95
SCAMP4-210ENST00000588555 SLC52A2Q9HAB3 445 aa33.45■■■□□ 2.95
SCAMP4-210ENST00000588555 THRAP3Q9Y2W1 955 aaKnown RBP33.45■■■□□ 2.95
SCAMP4-210ENST00000588555 BTBD11A6QL63 1104 aa33.44■■■□□ 2.94
SCAMP4-210ENST00000588555 EXOC6Q8TAG9 804 aa33.44■■■□□ 2.94
SCAMP4-210ENST00000588555 PDE3AQ14432 1141 aa33.43■■■□□ 2.94
SCAMP4-210ENST00000588555 CANXP27824 592 aaKnown RBP33.42■■■□□ 2.94
SCAMP4-210ENST00000588555 MRPL50Q8N5N7 158 aaKnown RBP33.42■■■□□ 2.94
SCAMP4-210ENST00000588555 CRBNQ96SW2 442 aa33.42■■■□□ 2.94
SCAMP4-210ENST00000588555 KIF16BQ96L93 1317 aa33.41■■■□□ 2.94
SCAMP4-210ENST00000588555 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.41■■■□□ 2.94
SCAMP4-210ENST00000588555 EIF4A1P60842 406 aaKnown RBP33.41■■■□□ 2.94
SCAMP4-210ENST00000588555 PPP4R2Q9NY27 417 aa33.41■■■□□ 2.94
SCAMP4-210ENST00000588555 KCNQ3O43525 872 aa33.4■■■□□ 2.94
SCAMP4-210ENST00000588555 DDX54Q8TDD1 881 aaKnown RBP33.4■■■□□ 2.94
SCAMP4-210ENST00000588555 SOS1Q07889 1333 aaPredicted RBP33.4■■■□□ 2.94
SCAMP4-210ENST00000588555 ZKSCAN2Q63HK3 967 aa33.39■■■□□ 2.94
SCAMP4-210ENST00000588555 CDCA7Q9BWT1 371 aaPredicted RBP33.39■■■□□ 2.94
SCAMP4-210ENST00000588555 TNS2Q63HR2 1409 aa33.38■■■□□ 2.93
SCAMP4-210ENST00000588555 NFATC2IPQ8NCF5 419 aa33.38■■■□□ 2.93
SCAMP4-210ENST00000588555 NOB1Q9ULX3 412 aaKnown RBP33.38■■■□□ 2.93
SCAMP4-210ENST00000588555 TNNQ9UQP3 1299 aa33.38■■■□□ 2.93
SCAMP4-210ENST00000588555 VPS72Q15906 364 aa33.37■■■□□ 2.93
SCAMP4-210ENST00000588555 TOGARAM1Q9Y4F4 1720 aa33.36■■■□□ 2.93
SCAMP4-210ENST00000588555 TCERG1O14776 1098 aaKnown RBP33.36■■■□□ 2.93
SCAMP4-210ENST00000588555 BARGINQ6ZT62 677 aa33.36■■■□□ 2.93
SCAMP4-210ENST00000588555 HEG1Q9ULI3 1381 aa33.36■■■□□ 2.93
SCAMP4-210ENST00000588555 PANK1Q8TE04 598 aa33.34■■■□□ 2.93
SCAMP4-210ENST00000588555 ERVV-2B6SEH9 535 aa33.34■■■□□ 2.93
SCAMP4-210ENST00000588555 RLBP1P12271 317 aa33.34■■■□□ 2.93
SCAMP4-210ENST00000588555 TRIM27P14373 513 aa33.34■■■□□ 2.93
SCAMP4-210ENST00000588555 ATF7IPQ6VMQ6 1270 aa33.34■■■□□ 2.93
SCAMP4-210ENST00000588555 CCDC9Q9Y3X0 531 aaKnown RBP33.33■■■□□ 2.93
SCAMP4-210ENST00000588555 EXOC5O00471 708 aa33.32■■■□□ 2.92
SCAMP4-210ENST00000588555 CABP4P57796 275 aa33.32■■■□□ 2.92
SCAMP4-210ENST00000588555 HOXB7P09629 217 aa33.32■■■□□ 2.92
SCAMP4-210ENST00000588555 ZNF790Q6PG37 636 aa33.32■■■□□ 2.92
SCAMP4-210ENST00000588555 USP21Q9UK80 565 aa33.32■■■□□ 2.92
SCAMP4-210ENST00000588555 IPO8O15397 1037 aaKnown RBP33.31■■■□□ 2.92
SCAMP4-210ENST00000588555 MEX3CQ5U5Q3 659 aaKnown RBP33.3■■■□□ 2.92
SCAMP4-210ENST00000588555 ARHGAP45Q92619 1136 aa33.3■■■□□ 2.92
SCAMP4-210ENST00000588555 CLUAP1Q96AJ1 413 aa33.29■■■□□ 2.92
SCAMP4-210ENST00000588555 SLC39A6Q13433 755 aa33.29■■■□□ 2.92
SCAMP4-210ENST00000588555 DZIP1LQ8IYY4 767 aaKnown RBP33.29■■■□□ 2.92
SCAMP4-210ENST00000588555 PAPPAQ13219 1627 aa33.27■■■□□ 2.92
SCAMP4-210ENST00000588555 MS4A1P11836 297 aa33.27■■■□□ 2.92
SCAMP4-210ENST00000588555 COG6Q9Y2V7 657 aa33.26■■■□□ 2.92
SCAMP4-210ENST00000588555 DDB1Q16531 1140 aa33.26■■■□□ 2.91
SCAMP4-210ENST00000588555 CCDC30Q5VVM6 783 aa33.26■■■□□ 2.91
SCAMP4-210ENST00000588555 GIGYF1O75420 1035 aaPredicted RBP33.25■■■□□ 2.91
SCAMP4-210ENST00000588555 AFF2P51816 1311 aa33.25■■■□□ 2.91
SCAMP4-210ENST00000588555 FTSJ3Q8IY81 847 aaKnown RBP33.24■■■□□ 2.91
SCAMP4-210ENST00000588555 CACNA1FO60840 1977 aa33.24■■■□□ 2.91
SCAMP4-210ENST00000588555 GLI3P10071 1580 aa33.24■■■□□ 2.91
SCAMP4-210ENST00000588555 SLC4A2P04920 1241 aa33.24■■■□□ 2.91
SCAMP4-210ENST00000588555 B4GALNT3Q6L9W6 998 aa33.24■■■□□ 2.91
SCAMP4-210ENST00000588555 HDGFL1Q5TGJ6 251 aa33.23■■■□□ 2.91
SCAMP4-210ENST00000588555 UBR2Q8IWV8 1755 aa33.23■■■□□ 2.91
SCAMP4-210ENST00000588555 ITGB4P16144 1822 aa33.22■■■□□ 2.91
SCAMP4-210ENST00000588555 FAM98CQ17RN3 349 aaKnown RBP33.21■■■□□ 2.91
SCAMP4-210ENST00000588555 STK31Q9BXU1 1019 aa33.21■■■□□ 2.91
SCAMP4-210ENST00000588555 C5P01031 1676 aa33.21■■■□□ 2.91
SCAMP4-210ENST00000588555 RGS12O14924 1447 aa33.21■■■□□ 2.91
SCAMP4-210ENST00000588555 ZNF496Q96IT1 587 aaPredicted RBP33.21■■■□□ 2.91
SCAMP4-210ENST00000588555 MVPQ14764 893 aaKnown RBP33.2■■■□□ 2.91
SCAMP4-210ENST00000588555 NECTIN2Q92692 538 aa33.2■■■□□ 2.91
SCAMP4-210ENST00000588555 TTC5Q8N0Z6 440 aa33.19■■■□□ 2.9
SCAMP4-210ENST00000588555 ABCC4O15439 1325 aa33.19■■■□□ 2.9
SCAMP4-210ENST00000588555 PTPRCP08575 1304 aa33.19■■■□□ 2.9
SCAMP4-210ENST00000588555 THSD7AQ9UPZ6 1657 aa33.19■■■□□ 2.9
SCAMP4-210ENST00000588555 CHMP4AQ9BY43 222 aa33.19■■■□□ 2.9
SCAMP4-210ENST00000588555 API5Q9BZZ5 524 aaKnown RBP33.19■■■□□ 2.9
SCAMP4-210ENST00000588555 ATRNO75882 1429 aa33.18■■■□□ 2.9
SCAMP4-210ENST00000588555 PRAMEF22A3QJZ6 481 aa33.18■■■□□ 2.9
SCAMP4-210ENST00000588555 G2E3Q7L622 706 aa33.18■■■□□ 2.9
SCAMP4-210ENST00000588555 TMEM57Q8N5G2 664 aa33.17■■■□□ 2.9
SCAMP4-210ENST00000588555 MARCH10Q8NA82 808 aaPredicted RBP33.17■■■□□ 2.9
SCAMP4-210ENST00000588555 CCDC136Q96JN2 1154 aa33.17■■■□□ 2.9
SCAMP4-210ENST00000588555 KCPQ6ZWJ8 1503 aa33.17■■■□□ 2.9
SCAMP4-210ENST00000588555 DOT1LQ8TEK3 1739 aa33.17■■■□□ 2.9
SCAMP4-210ENST00000588555 EIF2S2P20042 333 aaKnown RBP33.16■■■□□ 2.9
SCAMP4-210ENST00000588555 TMOD3Q9NYL9 352 aa33.16■■■□□ 2.9
SCAMP4-210ENST00000588555 FMNL2Q96PY5 1086 aa33.16■■■□□ 2.9
SCAMP4-210ENST00000588555 BCL9O00512 1426 aa33.14■■■□□ 2.9
SCAMP4-210ENST00000588555 PIGBQ92521 554 aa33.14■■■□□ 2.9
SCAMP4-210ENST00000588555 GJD4Q96KN9 370 aaPredicted RBP33.14■■■□□ 2.9
SCAMP4-210ENST00000588555 CHPF2Q9P2E5 772 aa33.12■■■□□ 2.89
SCAMP4-210ENST00000588555 FLIIQ13045 1269 aa33.11■■■□□ 2.89
SCAMP4-210ENST00000588555 SNRPA1P09661 255 aaKnown RBP33.11■■■□□ 2.89
SCAMP4-210ENST00000588555 AAMPQ13685 434 aa33.11■■■□□ 2.89
SCAMP4-210ENST00000588555 ITPRIPQ8IWB1 547 aa33.11■■■□□ 2.89
SCAMP4-210ENST00000588555 TRPC5Q9UL62 973 aaPredicted RBP33.11■■■□□ 2.89
SCAMP4-210ENST00000588555 LAMB4A4D0S4 1761 aa33.1■■■□□ 2.89
SCAMP4-210ENST00000588555 DDX19BQ9UMR2 479 aa33.1■■■□□ 2.89
SCAMP4-210ENST00000588555 DBF4Q9UBU7 674 aaPredicted RBP33.09■■■□□ 2.89
SCAMP4-210ENST00000588555 PHAXQ9H814 394 aaKnown RBP33.06■■■□□ 2.88
SCAMP4-210ENST00000588555 ASAP1Q9ULH1 1129 aa33.06■■■□□ 2.88
SCAMP4-210ENST00000588555 ONECUT3O60422 494 aaPredicted RBP33.05■■■□□ 2.88
SCAMP4-210ENST00000588555 PRIM1P49642 420 aaKnown RBP33.05■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms