RNA–Protein interactions for RNA: ENST00000587410.1

ATP9B-210, Transcript of ATPase phospholipid transporting 9B (putative), humanhuman

TSL 3

Gene ATP9B, Length 871 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9B-210ENST00000587410 C4BP0C0L5 1744 aa19.48■□□□□ 0.71
ATP9B-210ENST00000587410 PER1O15534 1290 aaPredicted RBP19.47■□□□□ 0.71
ATP9B-210ENST00000587410 PELP1Q8IZL8 1130 aaKnown RBP19.47■□□□□ 0.71
ATP9B-210ENST00000587410 ATG3Q9NT62 314 aa19.47■□□□□ 0.71
ATP9B-210ENST00000587410 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.46■□□□□ 0.71
ATP9B-210ENST00000587410 GNPATO15228 680 aa19.46■□□□□ 0.71
ATP9B-210ENST00000587410 CFAP53Q96M91 514 aa19.46■□□□□ 0.71
ATP9B-210ENST00000587410 RBM42Q9BTD8 480 aaKnown RBP19.46■□□□□ 0.71
ATP9B-210ENST00000587410 CHD4Q14839 1912 aa19.46■□□□□ 0.71
ATP9B-210ENST00000587410 AKAP4Q5JQC9 854 aa19.45■□□□□ 0.7
ATP9B-210ENST00000587410 MSL1Q68DK7 614 aa19.45■□□□□ 0.7
ATP9B-210ENST00000587410 TUBGCP6Q96RT7 1819 aa19.44■□□□□ 0.7
ATP9B-210ENST00000587410 LINC00116Q8NCU8 138 aa19.44■□□□□ 0.7
ATP9B-210ENST00000587410 RTCBQ9Y3I0 505 aaKnown RBP19.44■□□□□ 0.7
ATP9B-210ENST00000587410 UTRNP46939 3433 aa19.43■□□□□ 0.7
ATP9B-210ENST00000587410 CNGB1Q14028 1251 aaPredicted RBP19.43■□□□□ 0.7
ATP9B-210ENST00000587410 KDM6AO15550 1401 aaPredicted RBP19.42■□□□□ 0.7
ATP9B-210ENST00000587410 HMOX1P09601 288 aa19.42■□□□□ 0.7
ATP9B-210ENST00000587410 ADRA2BP18089 450 aa19.42■□□□□ 0.7
ATP9B-210ENST00000587410 NLGN2Q8NFZ4 835 aa19.42■□□□□ 0.7
ATP9B-210ENST00000587410 COL24A1Q17RW2 1714 aa19.42■□□□□ 0.7
ATP9B-210ENST00000587410 TAF1LQ8IZX4 1826 aa19.41■□□□□ 0.7
ATP9B-210ENST00000587410 U2SURPO15042 1029 aaKnown RBP19.41■□□□□ 0.7
ATP9B-210ENST00000587410 CD2APQ9Y5K6 639 aa19.41■□□□□ 0.7
ATP9B-210ENST00000587410 ITPK1Q13572 414 aa19.4■□□□□ 0.7
ATP9B-210ENST00000587410 TRAPPC3LQ5T215 181 aa19.4■□□□□ 0.7
ATP9B-210ENST00000587410 RC3H1Q5TC82 1133 aaKnown RBP19.4■□□□□ 0.7
ATP9B-210ENST00000587410 NFATC2IPQ8NCF5 419 aa19.4■□□□□ 0.7
ATP9B-210ENST00000587410 GOLGB1Q14789 3259 aaKnown RBP19.4■□□□□ 0.7
ATP9B-210ENST00000587410 GRIN3BO60391 1043 aa19.39■□□□□ 0.69
ATP9B-210ENST00000587410 C1QTNF8P60827 252 aa19.39■□□□□ 0.69
ATP9B-210ENST00000587410 NUDCQ9Y266 331 aa19.39■□□□□ 0.69
ATP9B-210ENST00000587410 CNTNAP4Q9C0A0 1308 aa19.39■□□□□ 0.69
ATP9B-210ENST00000587410 SENP3-EIF4A1A0A087X0R7 540 aa19.38■□□□□ 0.69
ATP9B-210ENST00000587410 PTCD1O75127 700 aaKnown RBP19.38■□□□□ 0.69
ATP9B-210ENST00000587410 SLC52A2Q9HAB3 445 aa19.38■□□□□ 0.69
ATP9B-210ENST00000587410 RFC4P35249 363 aa19.37■□□□□ 0.69
ATP9B-210ENST00000587410 GAS2L2Q8NHY3 880 aa19.37■□□□□ 0.69
ATP9B-210ENST00000587410 ZNF831Q5JPB2 1677 aa19.36■□□□□ 0.69
ATP9B-210ENST00000587410 NLGN1Q8N2Q7 840 aa19.36■□□□□ 0.69
ATP9B-210ENST00000587410 UBR3Q6ZT12 1888 aa19.35■□□□□ 0.69
ATP9B-210ENST00000587410 RNMTO43148 476 aaKnown RBP19.34■□□□□ 0.69
ATP9B-210ENST00000587410 RPS6KA4O75676 772 aa19.34■□□□□ 0.69
ATP9B-210ENST00000587410 YBX3P16989 372 aaKnown RBP eCLIP19.34■□□□□ 0.69
ATP9B-210ENST00000587410 TTC5Q8N0Z6 440 aa19.34■□□□□ 0.69
ATP9B-210ENST00000587410 GIGYF1O75420 1035 aaPredicted RBP19.33■□□□□ 0.68
ATP9B-210ENST00000587410 MTHFSDQ2M296 383 aaKnown RBP19.33■□□□□ 0.68
ATP9B-210ENST00000587410 CRKLP46109 303 aaKnown RBP19.32■□□□□ 0.68
ATP9B-210ENST00000587410 TEFQ10587 303 aa19.32■□□□□ 0.68
ATP9B-210ENST00000587410 AMIGO3Q86WK7 504 aa19.32■□□□□ 0.68
ATP9B-210ENST00000587410 COL3A1P02461 1466 aaPredicted RBP19.32■□□□□ 0.68
ATP9B-210ENST00000587410 MRC1P22897 1456 aa19.32■□□□□ 0.68
ATP9B-210ENST00000587410 GNAT3A8MTJ3 354 aa19.31■□□□□ 0.68
ATP9B-210ENST00000587410 MMP10P09238 476 aa19.31■□□□□ 0.68
ATP9B-210ENST00000587410 SLC4A9Q96Q91 983 aa19.31■□□□□ 0.68
ATP9B-210ENST00000587410 NEFMP07197 916 aa19.3■□□□□ 0.68
ATP9B-210ENST00000587410 ARHGEF1Q92888 912 aaKnown RBP19.3■□□□□ 0.68
ATP9B-210ENST00000587410 LGR6Q9HBX8 967 aa19.29■□□□□ 0.68
ATP9B-210ENST00000587410 CCDC87Q9NVE4 849 aa19.29■□□□□ 0.68
ATP9B-210ENST00000587410 PARP3Q9Y6F1 533 aa19.29■□□□□ 0.68
ATP9B-210ENST00000587410 SCN11AQ9UI33 1791 aa19.29■□□□□ 0.68
ATP9B-210ENST00000587410 SMIM5Q71RC9 77 aa19.28■□□□□ 0.68
ATP9B-210ENST00000587410 VSIG10Q8N0Z9 540 aa19.28■□□□□ 0.68
ATP9B-210ENST00000587410 ZPR1O75312 459 aa19.27■□□□□ 0.68
ATP9B-210ENST00000587410 U2AF1L5P0DN76 240 aaPredicted RBP19.27■□□□□ 0.68
ATP9B-210ENST00000587410 PPP2R1AP30153 589 aa19.27■□□□□ 0.68
ATP9B-210ENST00000587410 U2AF1Q01081 240 aaKnown RBP eCLIP19.27■□□□□ 0.68
ATP9B-210ENST00000587410 COL5A3P25940 1745 aaPredicted RBP19.27■□□□□ 0.68
ATP9B-210ENST00000587410 STARD3NLO95772 234 aa19.26■□□□□ 0.67
ATP9B-210ENST00000587410 PRKAR2BP31323 418 aa19.26■□□□□ 0.67
ATP9B-210ENST00000587410 NPM2Q86SE8 214 aaKnown RBP19.26■□□□□ 0.67
ATP9B-210ENST00000587410 RTF1Q92541 710 aaKnown RBP19.26■□□□□ 0.67
ATP9B-210ENST00000587410 CICQ96RK0 1608 aaPredicted RBP19.25■□□□□ 0.67
ATP9B-210ENST00000587410 GYS1P13807 737 aa19.25■□□□□ 0.67
ATP9B-210ENST00000587410 FCHSD2O94868 740 aa19.24■□□□□ 0.67
ATP9B-210ENST00000587410 TGFB2P61812 414 aa19.24■□□□□ 0.67
ATP9B-210ENST00000587410 SLC39A6Q13433 755 aa19.24■□□□□ 0.67
ATP9B-210ENST00000587410 DNAJC10Q8IXB1 793 aa19.24■□□□□ 0.67
ATP9B-210ENST00000587410 TEX13AQ9BXU3 409 aaPredicted RBP19.24■□□□□ 0.67
ATP9B-210ENST00000587410 USP42Q9H9J4 1324 aaKnown RBP19.24■□□□□ 0.67
ATP9B-210ENST00000587410 RSPH6AQ9H0K4 717 aa19.23■□□□□ 0.67
ATP9B-210ENST00000587410 ADAMTS7Q9UKP4 1686 aa19.21■□□□□ 0.67
ATP9B-210ENST00000587410 A0A087WZG4 1122 aa19.21■□□□□ 0.67
ATP9B-210ENST00000587410 CYP19A1P11511 503 aaPredicted RBP19.21■□□□□ 0.67
ATP9B-210ENST00000587410 INTS5Q6P9B9 1019 aaKnown RBP19.21■□□□□ 0.67
ATP9B-210ENST00000587410 ZNF790Q6PG37 636 aa19.21■□□□□ 0.67
ATP9B-210ENST00000587410 C10orf71Q711Q0 1435 aa19.21■□□□□ 0.67
ATP9B-210ENST00000587410 PNNQ9H307 717 aaKnown RBP19.21■□□□□ 0.67
ATP9B-210ENST00000587410 KCPQ6ZWJ8 1503 aa19.2■□□□□ 0.66
ATP9B-210ENST00000587410 ATP10DQ9P241 1426 aa19.2■□□□□ 0.66
ATP9B-210ENST00000587410 FMNL2Q96PY5 1086 aa19.2■□□□□ 0.66
ATP9B-210ENST00000587410 WWC3Q9ULE0 1092 aa19.2■□□□□ 0.66
ATP9B-210ENST00000587410 SOS1Q07889 1333 aaPredicted RBP19.2■□□□□ 0.66
ATP9B-210ENST00000587410 TJP1Q07157 1748 aa19.2■□□□□ 0.66
ATP9B-210ENST00000587410 COL15A1P39059 1388 aa19.19■□□□□ 0.66
ATP9B-210ENST00000587410 BTBD11A6QL63 1104 aa19.18■□□□□ 0.66
ATP9B-210ENST00000587410 IL17REQ8NFR9 667 aa19.18■□□□□ 0.66
ATP9B-210ENST00000587410 SRP68Q9UHB9 627 aaKnown RBP19.18■□□□□ 0.66
ATP9B-210ENST00000587410 CEMIPQ8WUJ3 1361 aa19.18■□□□□ 0.66
ATP9B-210ENST00000587410 C4AP0C0L4 1744 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms