RNA–Protein interactions for RNA: ENST00000585534.1

CNTNAP1-202, Transcript of contactin associated protein 1, humanhuman

TSL 3

Gene CNTNAP1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-202ENST00000585534 LINC00116Q8NCU8 138 aa15.9■□□□□ 0.14
CNTNAP1-202ENST00000585534 NLGN2Q8NFZ4 835 aa15.9■□□□□ 0.14
CNTNAP1-202ENST00000585534 COL24A1Q17RW2 1714 aa15.9■□□□□ 0.14
CNTNAP1-202ENST00000585534 C4BP0C0L5 1744 aa15.89■□□□□ 0.13
CNTNAP1-202ENST00000585534 MTHFSP49914 203 aa15.89■□□□□ 0.13
CNTNAP1-202ENST00000585534 CABP4P57796 275 aa15.89■□□□□ 0.13
CNTNAP1-202ENST00000585534 ITPK1Q13572 414 aa15.89■□□□□ 0.13
CNTNAP1-202ENST00000585534 CC2D1BQ5T0F9 858 aaKnown RBP15.89■□□□□ 0.13
CNTNAP1-202ENST00000585534 AMIGO3Q86WK7 504 aa15.89■□□□□ 0.13
CNTNAP1-202ENST00000585534 RBM42Q9BTD8 480 aaKnown RBP15.89■□□□□ 0.13
CNTNAP1-202ENST00000585534 GNPATO15228 680 aa15.88■□□□□ 0.13
CNTNAP1-202ENST00000585534 PER1O15534 1290 aaPredicted RBP15.88■□□□□ 0.13
CNTNAP1-202ENST00000585534 CNGB1Q14028 1251 aaPredicted RBP15.88■□□□□ 0.13
CNTNAP1-202ENST00000585534 SSFA2P28290 1259 aa15.87■□□□□ 0.13
CNTNAP1-202ENST00000585534 ZNF784Q8NCA9 323 aaPredicted RBP15.85■□□□□ 0.13
CNTNAP1-202ENST00000585534 NFATC2IPQ8NCF5 419 aa15.85■□□□□ 0.13
CNTNAP1-202ENST00000585534 CD2APQ9Y5K6 639 aa15.85■□□□□ 0.13
CNTNAP1-202ENST00000585534 CHD4Q14839 1912 aa15.85■□□□□ 0.13
CNTNAP1-202ENST00000585534 UBR3Q6ZT12 1888 aa15.84■□□□□ 0.13
CNTNAP1-202ENST00000585534 HMOX1P09601 288 aa15.84■□□□□ 0.13
CNTNAP1-202ENST00000585534 SLC4A9Q96Q91 983 aa15.84■□□□□ 0.13
CNTNAP1-202ENST00000585534 RTCBQ9Y3I0 505 aaKnown RBP15.84■□□□□ 0.13
CNTNAP1-202ENST00000585534 KDRP35968 1356 aa15.84■□□□□ 0.13
CNTNAP1-202ENST00000585534 KDM6AO15550 1401 aaPredicted RBP15.84■□□□□ 0.13
CNTNAP1-202ENST00000585534 GRIN3BO60391 1043 aa15.83■□□□□ 0.12
CNTNAP1-202ENST00000585534 DIAPH1O60610 1272 aaKnown RBP15.83■□□□□ 0.12
CNTNAP1-202ENST00000585534 PTCD1O75127 700 aaKnown RBP15.83■□□□□ 0.12
CNTNAP1-202ENST00000585534 TRAPPC3LQ5T215 181 aa15.83■□□□□ 0.12
CNTNAP1-202ENST00000585534 AKAP4Q5JQC9 854 aa15.82■□□□□ 0.12
CNTNAP1-202ENST00000585534 YBX3P16989 372 aaKnown RBP eCLIP15.81■□□□□ 0.12
CNTNAP1-202ENST00000585534 GOLGB1Q14789 3259 aaKnown RBP15.81■□□□□ 0.12
CNTNAP1-202ENST00000585534 RC3H1Q5TC82 1133 aaKnown RBP15.81■□□□□ 0.12
CNTNAP1-202ENST00000585534 RPS6KA4O75676 772 aa15.79■□□□□ 0.12
CNTNAP1-202ENST00000585534 RFC4P35249 363 aa15.79■□□□□ 0.12
CNTNAP1-202ENST00000585534 ARHGEF1Q92888 912 aaKnown RBP15.79■□□□□ 0.12
CNTNAP1-202ENST00000585534 LGR6Q9HBX8 967 aa15.79■□□□□ 0.12
CNTNAP1-202ENST00000585534 CNTNAP4Q9C0A0 1308 aa15.78■□□□□ 0.12
CNTNAP1-202ENST00000585534 U2SURPO15042 1029 aaKnown RBP15.78■□□□□ 0.12
CNTNAP1-202ENST00000585534 MMP10P09238 476 aa15.78■□□□□ 0.12
CNTNAP1-202ENST00000585534 ADRA2BP18089 450 aa15.78■□□□□ 0.12
CNTNAP1-202ENST00000585534 NLGN1Q8N2Q7 840 aa15.78■□□□□ 0.12
CNTNAP1-202ENST00000585534 SLC52A2Q9HAB3 445 aa15.78■□□□□ 0.12
CNTNAP1-202ENST00000585534 NPC1L1Q9UHC9 1359 aa15.77■□□□□ 0.12
CNTNAP1-202ENST00000585534 RNMTO43148 476 aaKnown RBP15.77■□□□□ 0.12
CNTNAP1-202ENST00000585534 MTHFSDQ2M296 383 aaKnown RBP15.77■□□□□ 0.12
CNTNAP1-202ENST00000585534 WWC3Q9ULE0 1092 aa15.77■□□□□ 0.12
CNTNAP1-202ENST00000585534 CRKLP46109 303 aaKnown RBP15.76■□□□□ 0.11
CNTNAP1-202ENST00000585534 SLC39A6Q13433 755 aa15.75■□□□□ 0.11
CNTNAP1-202ENST00000585534 ZNF831Q5JPB2 1677 aa15.75■□□□□ 0.11
CNTNAP1-202ENST00000585534 SCN11AQ9UI33 1791 aa15.75■□□□□ 0.11
CNTNAP1-202ENST00000585534 GYS1P13807 737 aa15.74■□□□□ 0.11
CNTNAP1-202ENST00000585534 MYH14Q7Z406 1995 aaKnown RBP15.74■□□□□ 0.11
CNTNAP1-202ENST00000585534 DNAJC10Q8IXB1 793 aa15.73■□□□□ 0.11
CNTNAP1-202ENST00000585534 COL5A3P25940 1745 aaPredicted RBP15.73■□□□□ 0.11
CNTNAP1-202ENST00000585534 INTS5Q6P9B9 1019 aaKnown RBP15.72■□□□□ 0.11
CNTNAP1-202ENST00000585534 CFAP53Q96M91 514 aa15.72■□□□□ 0.11
CNTNAP1-202ENST00000585534 PARP3Q9Y6F1 533 aa15.72■□□□□ 0.11
CNTNAP1-202ENST00000585534 CCDC87Q9NVE4 849 aa15.71■□□□□ 0.11
CNTNAP1-202ENST00000585534 SRP68Q9UHB9 627 aaKnown RBP15.71■□□□□ 0.11
CNTNAP1-202ENST00000585534 GNAT3A8MTJ3 354 aa15.7■□□□□ 0.1
CNTNAP1-202ENST00000585534 TGFB2P61812 414 aa15.7■□□□□ 0.1
CNTNAP1-202ENST00000585534 GAS2L2Q8NHY3 880 aa15.7■□□□□ 0.1
CNTNAP1-202ENST00000585534 A0A0G2JLW4 131 aa15.69■□□□□ 0.1
CNTNAP1-202ENST00000585534 CYP19A1P11511 503 aaPredicted RBP15.69■□□□□ 0.1
CNTNAP1-202ENST00000585534 TEFQ10587 303 aa15.69■□□□□ 0.1
CNTNAP1-202ENST00000585534 TTC5Q8N0Z6 440 aa15.69■□□□□ 0.1
CNTNAP1-202ENST00000585534 NUDCQ9Y266 331 aa15.69■□□□□ 0.1
CNTNAP1-202ENST00000585534 COL3A1P02461 1466 aaPredicted RBP15.69■□□□□ 0.1
CNTNAP1-202ENST00000585534 ZPR1O75312 459 aa15.68■□□□□ 0.1
CNTNAP1-202ENST00000585534 GIGYF1O75420 1035 aaPredicted RBP15.68■□□□□ 0.1
CNTNAP1-202ENST00000585534 FKBP8Q14318 412 aa15.68■□□□□ 0.1
CNTNAP1-202ENST00000585534 IL17REQ8NFR9 667 aa15.68■□□□□ 0.1
CNTNAP1-202ENST00000585534 VIRMAQ69YN4 1812 aaKnown RBP15.68■□□□□ 0.1
CNTNAP1-202ENST00000585534 CICQ96RK0 1608 aaPredicted RBP15.68■□□□□ 0.1
CNTNAP1-202ENST00000585534 USP42Q9H9J4 1324 aaKnown RBP15.68■□□□□ 0.1
CNTNAP1-202ENST00000585534 MRC1P22897 1456 aa15.67■□□□□ 0.1
CNTNAP1-202ENST00000585534 PPP2R1AP30153 589 aa15.67■□□□□ 0.1
CNTNAP1-202ENST00000585534 PRKAR2BP31323 418 aa15.67■□□□□ 0.1
CNTNAP1-202ENST00000585534 C1QTNF8P60827 252 aa15.67■□□□□ 0.1
CNTNAP1-202ENST00000585534 VSIG10Q8N0Z9 540 aa15.67■□□□□ 0.1
CNTNAP1-202ENST00000585534 BCS1LQ9Y276 419 aa15.67■□□□□ 0.1
CNTNAP1-202ENST00000585534 TJP1Q07157 1748 aa15.67■□□□□ 0.1
CNTNAP1-202ENST00000585534 U2AF1L5P0DN76 240 aaPredicted RBP15.66■□□□□ 0.1
CNTNAP1-202ENST00000585534 DPEP1P16444 411 aa15.66■□□□□ 0.1
CNTNAP1-202ENST00000585534 U2AF1Q01081 240 aaKnown RBP eCLIP15.66■□□□□ 0.1
CNTNAP1-202ENST00000585534 USPL1Q5W0Q7 1092 aa15.66■□□□□ 0.1
CNTNAP1-202ENST00000585534 PHACTR3Q96KR7 559 aa15.66■□□□□ 0.1
CNTNAP1-202ENST00000585534 PXDNLA1KZ92 1463 aa15.65■□□□□ 0.1
CNTNAP1-202ENST00000585534 STARD3NLO95772 234 aa15.65■□□□□ 0.1
CNTNAP1-202ENST00000585534 ZBTB1Q9Y2K1 713 aa15.65■□□□□ 0.1
CNTNAP1-202ENST00000585534 C4AP0C0L4 1744 aa15.65■□□□□ 0.1
CNTNAP1-202ENST00000585534 SOS1Q07889 1333 aaPredicted RBP15.65■□□□□ 0.1
CNTNAP1-202ENST00000585534 FCHSD2O94868 740 aa15.64■□□□□ 0.09
CNTNAP1-202ENST00000585534 CANXP27824 592 aaKnown RBP15.64■□□□□ 0.09
CNTNAP1-202ENST00000585534 DDR1Q08345 913 aa15.64■□□□□ 0.09
CNTNAP1-202ENST00000585534 ZNF790Q6PG37 636 aa15.64■□□□□ 0.09
CNTNAP1-202ENST00000585534 C10orf71Q711Q0 1435 aa15.64■□□□□ 0.09
CNTNAP1-202ENST00000585534 ZNF496Q96IT1 587 aaPredicted RBP15.64■□□□□ 0.09
CNTNAP1-202ENST00000585534 RSPH6AQ9H0K4 717 aa15.64■□□□□ 0.09
CNTNAP1-202ENST00000585534 ATP10DQ9P241 1426 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms