RNA–Protein interactions for RNA: ENST00000585486.1

SPC24-202, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-202ENST00000585486 KDM3BQ7LBC6 1761 aa17.4■□□□□ 0.38
SPC24-202ENST00000585486 KCNQ3O43525 872 aa17.4■□□□□ 0.38
SPC24-202ENST00000585486 TSPYL6Q8N831 410 aa17.4■□□□□ 0.38
SPC24-202ENST00000585486 LAS1LQ9Y4W2 734 aaKnown RBP17.4■□□□□ 0.38
SPC24-202ENST00000585486 VAMP4O75379 141 aa17.39■□□□□ 0.37
SPC24-202ENST00000585486 KRT24Q2M2I5 525 aa17.39■□□□□ 0.37
SPC24-202ENST00000585486 NFATC2IPQ8NCF5 419 aa17.39■□□□□ 0.37
SPC24-202ENST00000585486 CT47B1P0C2W7 299 aaPredicted RBP17.38■□□□□ 0.37
SPC24-202ENST00000585486 TEFQ10587 303 aa17.38■□□□□ 0.37
SPC24-202ENST00000585486 ZNF772Q68DY9 489 aaPredicted RBP17.38■□□□□ 0.37
SPC24-202ENST00000585486 TSPYL4Q9UJ04 414 aa17.38■□□□□ 0.37
SPC24-202ENST00000585486 RCAN3Q9UKA8 241 aa17.38■□□□□ 0.37
SPC24-202ENST00000585486 EIF4A1P60842 406 aaKnown RBP17.37■□□□□ 0.37
SPC24-202ENST00000585486 BCL9O00512 1426 aa17.37■□□□□ 0.37
SPC24-202ENST00000585486 BTBD11A6QL63 1104 aa17.36■□□□□ 0.37
SPC24-202ENST00000585486 RARSP54136 660 aaKnown RBP17.36■□□□□ 0.37
SPC24-202ENST00000585486 SEPT12Q8IYM1 358 aa17.35■□□□□ 0.37
SPC24-202ENST00000585486 SUPT16HQ9Y5B9 1047 aaKnown RBP17.35■□□□□ 0.37
SPC24-202ENST00000585486 PAPPAQ13219 1627 aa17.35■□□□□ 0.37
SPC24-202ENST00000585486 CABP4P57796 275 aa17.34■□□□□ 0.37
SPC24-202ENST00000585486 RBM6P78332 1123 aaKnown RBP17.34■□□□□ 0.37
SPC24-202ENST00000585486 POTEAQ6S8J7 498 aa17.34■□□□□ 0.37
SPC24-202ENST00000585486 ILDR1Q86SU0 546 aaPredicted RBP17.34■□□□□ 0.37
SPC24-202ENST00000585486 PIGBQ92521 554 aa17.34■□□□□ 0.37
SPC24-202ENST00000585486 SLC39A6Q13433 755 aa17.33■□□□□ 0.36
SPC24-202ENST00000585486 ZNF790Q6PG37 636 aa17.33■□□□□ 0.36
SPC24-202ENST00000585486 BCAR3O75815 825 aa17.32■□□□□ 0.36
SPC24-202ENST00000585486 TWISTNBQ3B726 338 aaPredicted RBP17.32■□□□□ 0.36
SPC24-202ENST00000585486 KCPQ6ZWJ8 1503 aa17.31■□□□□ 0.36
SPC24-202ENST00000585486 ITGB4P16144 1822 aa17.31■□□□□ 0.36
SPC24-202ENST00000585486 ELL2O00472 640 aaPredicted RBP17.31■□□□□ 0.36
SPC24-202ENST00000585486 BRPF1P55201 1214 aaPredicted RBP17.31■□□□□ 0.36
SPC24-202ENST00000585486 SSH1Q8WYL5 1049 aa17.31■□□□□ 0.36
SPC24-202ENST00000585486 ZNF428Q96B54 188 aa17.31■□□□□ 0.36
SPC24-202ENST00000585486 UBR2Q8IWV8 1755 aa17.3■□□□□ 0.36
SPC24-202ENST00000585486 DOT1LQ8TEK3 1739 aa17.3■□□□□ 0.36
SPC24-202ENST00000585486 SOS1Q07889 1333 aaPredicted RBP17.3■□□□□ 0.36
SPC24-202ENST00000585486 PRIM1P49642 420 aaKnown RBP17.3■□□□□ 0.36
SPC24-202ENST00000585486 ZNF496Q96IT1 587 aaPredicted RBP17.3■□□□□ 0.36
SPC24-202ENST00000585486 GIGYF1O75420 1035 aaPredicted RBP17.29■□□□□ 0.36
SPC24-202ENST00000585486 HOXB7P09629 217 aa17.29■□□□□ 0.36
SPC24-202ENST00000585486 ALDH1L2Q3SY69 923 aa17.29■□□□□ 0.36
SPC24-202ENST00000585486 ATG3Q9NT62 314 aa17.29■□□□□ 0.36
SPC24-202ENST00000585486 PTF1AQ7RTS3 328 aa17.28■□□□□ 0.36
SPC24-202ENST00000585486 MRPL50Q8N5N7 158 aaKnown RBP17.28■□□□□ 0.36
SPC24-202ENST00000585486 TMOD3Q9NYL9 352 aa17.28■□□□□ 0.36
SPC24-202ENST00000585486 ASAP1Q9ULH1 1129 aa17.28■□□□□ 0.36
SPC24-202ENST00000585486 BRWD3Q6RI45 1802 aa17.27■□□□□ 0.36
SPC24-202ENST00000585486 PRAMEF22A3QJZ6 481 aa17.27■□□□□ 0.36
SPC24-202ENST00000585486 KCNQ2O43526 872 aa17.27■□□□□ 0.36
SPC24-202ENST00000585486 RRP1P56182 461 aaKnown RBP17.27■□□□□ 0.36
SPC24-202ENST00000585486 RXRBP28702 533 aa17.26■□□□□ 0.35
SPC24-202ENST00000585486 FAM182BQ5T319 152 aa17.26■□□□□ 0.35
SPC24-202ENST00000585486 ACSBG1Q96GR2 724 aa17.26■□□□□ 0.35
SPC24-202ENST00000585486 RGS12O14924 1447 aa17.26■□□□□ 0.35
SPC24-202ENST00000585486 SLC4A9Q96Q91 983 aa17.25■□□□□ 0.35
SPC24-202ENST00000585486 BCL2L13Q9BXK5 485 aa17.25■□□□□ 0.35
SPC24-202ENST00000585486 KRT27Q7Z3Y8 459 aa17.24■□□□□ 0.35
SPC24-202ENST00000585486 FMNL2Q96PY5 1086 aa17.24■□□□□ 0.35
SPC24-202ENST00000585486 C5P01031 1676 aa17.23■□□□□ 0.35
SPC24-202ENST00000585486 NHSQ6T4R5 1651 aa17.23■□□□□ 0.35
SPC24-202ENST00000585486 A0A0G2JS52 829 aa17.23■□□□□ 0.35
SPC24-202ENST00000585486 TCERG1O14776 1098 aaKnown RBP17.23■□□□□ 0.35
SPC24-202ENST00000585486 PLIN1O60240 522 aa17.23■□□□□ 0.35
SPC24-202ENST00000585486 MYT1Q01538 1121 aa17.23■□□□□ 0.35
SPC24-202ENST00000585486 PDIA6Q15084 440 aa17.23■□□□□ 0.35
SPC24-202ENST00000585486 SNRPA1P09661 255 aaKnown RBP17.22■□□□□ 0.35
SPC24-202ENST00000585486 SMC4Q9NTJ3 1288 aa17.22■□□□□ 0.35
SPC24-202ENST00000585486 USP16Q9Y5T5 823 aa17.22■□□□□ 0.35
SPC24-202ENST00000585486 SBF2Q86WG5 1849 aa17.21■□□□□ 0.35
SPC24-202ENST00000585486 C20orf194Q5TEA3 1177 aa17.21■□□□□ 0.35
SPC24-202ENST00000585486 LRP10Q7Z4F1 713 aa17.21■□□□□ 0.35
SPC24-202ENST00000585486 TTC5Q8N0Z6 440 aa17.21■□□□□ 0.35
SPC24-202ENST00000585486 VSIG10Q8N0Z9 540 aa17.21■□□□□ 0.35
SPC24-202ENST00000585486 TNNQ9UQP3 1299 aa17.21■□□□□ 0.35
SPC24-202ENST00000585486 G2E3Q7L622 706 aa17.2■□□□□ 0.34
SPC24-202ENST00000585486 NOB1Q9ULX3 412 aaKnown RBP17.2■□□□□ 0.34
SPC24-202ENST00000585486 CICQ96RK0 1608 aaPredicted RBP17.19■□□□□ 0.34
SPC24-202ENST00000585486 PTCD1O75127 700 aaKnown RBP17.19■□□□□ 0.34
SPC24-202ENST00000585486 HDGFL1Q5TGJ6 251 aa17.19■□□□□ 0.34
SPC24-202ENST00000585486 CCDC30Q5VVM6 783 aa17.19■□□□□ 0.34
SPC24-202ENST00000585486 FAM196AQ6ZSG2 479 aa17.19■□□□□ 0.34
SPC24-202ENST00000585486 SYTL4Q96C24 671 aaPredicted RBP17.19■□□□□ 0.34
SPC24-202ENST00000585486 SLC4A2P04920 1241 aa17.18■□□□□ 0.34
SPC24-202ENST00000585486 ARHGAP45Q92619 1136 aa17.18■□□□□ 0.34
SPC24-202ENST00000585486 BCL11BQ9C0K0 894 aaPredicted RBP17.18■□□□□ 0.34
SPC24-202ENST00000585486 RLBP1P12271 317 aa17.17■□□□□ 0.34
SPC24-202ENST00000585486 EIF2S2P20042 333 aaKnown RBP17.17■□□□□ 0.34
SPC24-202ENST00000585486 TJP1Q07157 1748 aa17.17■□□□□ 0.34
SPC24-202ENST00000585486 PROSER3Q2NL68 480 aa17.17■□□□□ 0.34
SPC24-202ENST00000585486 NECTIN2Q92692 538 aa17.17■□□□□ 0.34
SPC24-202ENST00000585486 CHPF2Q9P2E5 772 aa17.17■□□□□ 0.34
SPC24-202ENST00000585486 ZNF831Q5JPB2 1677 aa17.16■□□□□ 0.34
SPC24-202ENST00000585486 PALLDQ8WX93 1383 aa17.16■□□□□ 0.34
SPC24-202ENST00000585486 LAMB4A4D0S4 1761 aa17.16■□□□□ 0.34
SPC24-202ENST00000585486 NBPF26B4DH59 902 aa17.16■□□□□ 0.34
SPC24-202ENST00000585486 TRIM27P14373 513 aa17.16■□□□□ 0.34
SPC24-202ENST00000585486 PDE3AQ14432 1141 aa17.16■□□□□ 0.34
SPC24-202ENST00000585486 NBPF14Q5TI25 921 aa17.16■□□□□ 0.34
SPC24-202ENST00000585486 NBPF10Q6P3W6 841 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms