RNA–Protein interactions for RNA: ENST00000585296.1

NCOR1-226, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 1 (best)

Gene NCOR1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-226ENST00000585296 SIK1P57059 783 aa25.52■■□□□ 1.68
NCOR1-226ENST00000585296 C9orf131Q5VYM1 1079 aa25.52■■□□□ 1.68
NCOR1-226ENST00000585296 PIGBQ92521 554 aa25.52■■□□□ 1.68
NCOR1-226ENST00000585296 KCPQ6ZWJ8 1503 aa25.51■■□□□ 1.67
NCOR1-226ENST00000585296 FCHSD2O94868 740 aa25.5■■□□□ 1.67
NCOR1-226ENST00000585296 KDM2BQ8NHM5 1336 aa25.5■■□□□ 1.67
NCOR1-226ENST00000585296 PUS7Q96PZ0 661 aaKnown RBP25.5■■□□□ 1.67
NCOR1-226ENST00000585296 ARFGEF1Q9Y6D6 1849 aa25.5■■□□□ 1.67
NCOR1-226ENST00000585296 RRS1Q15050 365 aaKnown RBP25.49■■□□□ 1.67
NCOR1-226ENST00000585296 TNRC6CQ9HCJ0 1690 aaKnown RBP25.48■■□□□ 1.67
NCOR1-226ENST00000585296 DPEP1P16444 411 aa25.48■■□□□ 1.67
NCOR1-226ENST00000585296 ITPK1Q13572 414 aa25.46■■□□□ 1.67
NCOR1-226ENST00000585296 C4AP0C0L4 1744 aa25.46■■□□□ 1.67
NCOR1-226ENST00000585296 HSPA1AP0DMV8 641 aaKnown RBP25.45■■□□□ 1.66
NCOR1-226ENST00000585296 HSPA1BP0DMV9 641 aaKnown RBP25.45■■□□□ 1.66
NCOR1-226ENST00000585296 NLGN1Q8N2Q7 840 aa25.45■■□□□ 1.66
NCOR1-226ENST00000585296 SMC1BQ8NDV3 1235 aa25.45■■□□□ 1.66
NCOR1-226ENST00000585296 CCDC87Q9NVE4 849 aa25.45■■□□□ 1.66
NCOR1-226ENST00000585296 INSRP06213 1382 aa25.44■■□□□ 1.66
NCOR1-226ENST00000585296 CARD11Q9BXL7 1154 aa25.44■■□□□ 1.66
NCOR1-226ENST00000585296 RRAGCQ9HB90 399 aa25.44■■□□□ 1.66
NCOR1-226ENST00000585296 ATP6V1AP38606 617 aa25.43■■□□□ 1.66
NCOR1-226ENST00000585296 TMF1P82094 1093 aa25.43■■□□□ 1.66
NCOR1-226ENST00000585296 NKX1-1Q15270 411 aaPredicted RBP25.43■■□□□ 1.66
NCOR1-226ENST00000585296 HSP90AB2PQ58FF8 381 aa25.41■■□□□ 1.66
NCOR1-226ENST00000585296 RNF181Q9P0P0 153 aa25.41■■□□□ 1.66
NCOR1-226ENST00000585296 KCNA3P22001 575 aa25.4■■□□□ 1.66
NCOR1-226ENST00000585296 TRAPPC3LQ5T215 181 aa25.4■■□□□ 1.66
NCOR1-226ENST00000585296 TMOD3Q9NYL9 352 aa25.4■■□□□ 1.66
NCOR1-226ENST00000585296 ASAP1Q9ULH1 1129 aa25.4■■□□□ 1.66
NCOR1-226ENST00000585296 DCAF5Q96JK2 942 aa25.39■■□□□ 1.66
NCOR1-226ENST00000585296 RTCBQ9Y3I0 505 aaKnown RBP25.39■■□□□ 1.66
NCOR1-226ENST00000585296 FLT4P35916 1363 aa25.39■■□□□ 1.65
NCOR1-226ENST00000585296 PIM2Q9P1W9 311 aa25.38■■□□□ 1.65
NCOR1-226ENST00000585296 SBF1O95248 1867 aa25.38■■□□□ 1.65
NCOR1-226ENST00000585296 PARP3Q9Y6F1 533 aa25.37■■□□□ 1.65
NCOR1-226ENST00000585296 KIF24Q5T7B8 1368 aa25.36■■□□□ 1.65
NCOR1-226ENST00000585296 SLC34A2O95436 690 aa25.35■■□□□ 1.65
NCOR1-226ENST00000585296 GYS1P13807 737 aa25.35■■□□□ 1.65
NCOR1-226ENST00000585296 ADRA2BP18089 450 aa25.35■■□□□ 1.65
NCOR1-226ENST00000585296 GGNBP2Q9H3C7 697 aa25.35■■□□□ 1.65
NCOR1-226ENST00000585296 SPG7Q9UQ90 795 aa25.35■■□□□ 1.65
NCOR1-226ENST00000585296 NCAPD2Q15021 1401 aa25.35■■□□□ 1.65
NCOR1-226ENST00000585296 KDRP35968 1356 aa25.34■■□□□ 1.65
NCOR1-226ENST00000585296 FYB1O15117 783 aa25.34■■□□□ 1.65
NCOR1-226ENST00000585296 DALRD3Q5D0E6 543 aaKnown RBP25.34■■□□□ 1.65
NCOR1-226ENST00000585296 ARHGEF1Q92888 912 aaKnown RBP25.34■■□□□ 1.65
NCOR1-226ENST00000585296 ZNF831Q5JPB2 1677 aa25.33■■□□□ 1.65
NCOR1-226ENST00000585296 ATG3Q9NT62 314 aa25.33■■□□□ 1.65
NCOR1-226ENST00000585296 ZC3H4Q9UPT8 1303 aaKnown RBP25.32■■□□□ 1.64
NCOR1-226ENST00000585296 COL5A3P25940 1745 aaPredicted RBP25.31■■□□□ 1.64
NCOR1-226ENST00000585296 SLC24A1O60721 1099 aa25.3■■□□□ 1.64
NCOR1-226ENST00000585296 RFC4P35249 363 aa25.3■■□□□ 1.64
NCOR1-226ENST00000585296 RC3H1Q5TC82 1133 aaKnown RBP25.29■■□□□ 1.64
NCOR1-226ENST00000585296 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.28■■□□□ 1.64
NCOR1-226ENST00000585296 CNTNAP4Q9C0A0 1308 aa25.28■■□□□ 1.64
NCOR1-226ENST00000585296 KIF20BQ96Q89 1820 aa25.28■■□□□ 1.64
NCOR1-226ENST00000585296 SLC4A9Q96Q91 983 aa25.27■■□□□ 1.64
NCOR1-226ENST00000585296 TESK2Q96S53 571 aa25.27■■□□□ 1.64
NCOR1-226ENST00000585296 RPS6KA4O75676 772 aa25.26■■□□□ 1.63
NCOR1-226ENST00000585296 VEGFAP15692 232 aaPredicted RBP25.26■■□□□ 1.63
NCOR1-226ENST00000585296 PHKG2P15735 406 aa25.26■■□□□ 1.63
NCOR1-226ENST00000585296 IFNL2Q8IZJ0 200 aa25.26■■□□□ 1.63
NCOR1-226ENST00000585296 KDM6AO15550 1401 aaPredicted RBP25.26■■□□□ 1.63
NCOR1-226ENST00000585296 MYH14Q7Z406 1995 aaKnown RBP25.24■■□□□ 1.63
NCOR1-226ENST00000585296 GLTPD2A6NH11 291 aa25.23■■□□□ 1.63
NCOR1-226ENST00000585296 CHRNA5P30532 468 aa25.23■■□□□ 1.63
NCOR1-226ENST00000585296 RBM42Q9BTD8 480 aaKnown RBP25.23■■□□□ 1.63
NCOR1-226ENST00000585296 RASSF7Q02833 373 aa25.22■■□□□ 1.63
NCOR1-226ENST00000585296 EMILIN1Q9Y6C2 1016 aa25.22■■□□□ 1.63
NCOR1-226ENST00000585296 DDR1Q08345 913 aa25.21■■□□□ 1.63
NCOR1-226ENST00000585296 TIAM2Q8IVF5 1701 aa25.2■■□□□ 1.62
NCOR1-226ENST00000585296 LMNB1P20700 586 aa25.19■■□□□ 1.62
NCOR1-226ENST00000585296 ANKRD26Q9UPS8 1709 aa25.19■■□□□ 1.62
NCOR1-226ENST00000585296 ST20-MTHFSA0A0A6YYL1 179 aa25.18■■□□□ 1.62
NCOR1-226ENST00000585296 FKBP8Q14318 412 aa25.18■■□□□ 1.62
NCOR1-226ENST00000585296 EYA1Q99502 592 aa25.18■■□□□ 1.62
NCOR1-226ENST00000585296 USP42Q9H9J4 1324 aaKnown RBP25.17■■□□□ 1.62
NCOR1-226ENST00000585296 SRP68Q9UHB9 627 aaKnown RBP25.17■■□□□ 1.62
NCOR1-226ENST00000585296 ERVV-2B6SEH9 535 aa25.16■■□□□ 1.62
NCOR1-226ENST00000585296 CREBZFQ9NS37 354 aa25.15■■□□□ 1.62
NCOR1-226ENST00000585296 POLRMTO00411 1230 aaKnown RBP25.14■■□□□ 1.62
NCOR1-226ENST00000585296 PRDM10Q9NQV6 1147 aa25.14■■□□□ 1.62
NCOR1-226ENST00000585296 CCDC88AQ3V6T2 1871 aa25.14■■□□□ 1.61
NCOR1-226ENST00000585296 WASHC2AQ641Q2 1341 aa25.13■■□□□ 1.61
NCOR1-226ENST00000585296 FOXN1O15353 648 aa25.13■■□□□ 1.61
NCOR1-226ENST00000585296 PPM1GO15355 546 aaPredicted RBP25.13■■□□□ 1.61
NCOR1-226ENST00000585296 MKRN1Q9UHC7 482 aaKnown RBP25.13■■□□□ 1.61
NCOR1-226ENST00000585296 POTECB2RU33 542 aa25.12■■□□□ 1.61
NCOR1-226ENST00000585296 DLEC1Q9Y238 1755 aa25.12■■□□□ 1.61
NCOR1-226ENST00000585296 CRKLP46109 303 aaKnown RBP25.11■■□□□ 1.61
NCOR1-226ENST00000585296 EIF4G2P78344 907 aaKnown RBP eCLIP25.11■■□□□ 1.61
NCOR1-226ENST00000585296 TM4SF1P30408 202 aa25.1■■□□□ 1.61
NCOR1-226ENST00000585296 ADAMTS7Q9UKP4 1686 aa25.09■■□□□ 1.61
NCOR1-226ENST00000585296 HSP90AB1P08238 724 aaKnown RBP25.08■■□□□ 1.61
NCOR1-226ENST00000585296 ZEB1P37275 1124 aaPredicted RBP25.08■■□□□ 1.61
NCOR1-226ENST00000585296 CDCA8Q53HL2 280 aa25.08■■□□□ 1.61
NCOR1-226ENST00000585296 AFDNP55196 1824 aaKnown RBP25.07■■□□□ 1.6
NCOR1-226ENST00000585296 TJP1Q07157 1748 aa25.07■■□□□ 1.6
NCOR1-226ENST00000585296 DPY19L2Q6NUT2 758 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms