RNA–Protein interactions for RNA: ENST00000585294.5

CUEDC1-213, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-213ENST00000585294 C4BP0C0L5 1744 aa17.33■□□□□ 0.36
CUEDC1-213ENST00000585294 HMGB2P26583 209 aaKnown RBP17.32■□□□□ 0.36
CUEDC1-213ENST00000585294 MTHFSP49914 203 aa17.32■□□□□ 0.36
CUEDC1-213ENST00000585294 AMOTQ4VCS5 1084 aa17.32■□□□□ 0.36
CUEDC1-213ENST00000585294 CC2D1BQ5T0F9 858 aaKnown RBP17.32■□□□□ 0.36
CUEDC1-213ENST00000585294 TAF1LQ8IZX4 1826 aa17.32■□□□□ 0.36
CUEDC1-213ENST00000585294 KDM6AO15550 1401 aaPredicted RBP17.31■□□□□ 0.36
CUEDC1-213ENST00000585294 GNPATO15228 680 aa17.31■□□□□ 0.36
CUEDC1-213ENST00000585294 CNGB1Q14028 1251 aaPredicted RBP17.31■□□□□ 0.36
CUEDC1-213ENST00000585294 ZNF784Q8NCA9 323 aaPredicted RBP17.31■□□□□ 0.36
CUEDC1-213ENST00000585294 RBM42Q9BTD8 480 aaKnown RBP17.31■□□□□ 0.36
CUEDC1-213ENST00000585294 HSP90AB1P08238 724 aaKnown RBP17.3■□□□□ 0.36
CUEDC1-213ENST00000585294 CABP4P57796 275 aa17.3■□□□□ 0.36
CUEDC1-213ENST00000585294 PLEKHG2Q9H7P9 1386 aa17.29■□□□□ 0.36
CUEDC1-213ENST00000585294 YBX3P16989 372 aaKnown RBP eCLIP17.29■□□□□ 0.36
CUEDC1-213ENST00000585294 UTRNP46939 3433 aa17.29■□□□□ 0.36
CUEDC1-213ENST00000585294 KDRP35968 1356 aa17.28■□□□□ 0.36
CUEDC1-213ENST00000585294 HMOX1P09601 288 aa17.28■□□□□ 0.36
CUEDC1-213ENST00000585294 SSFA2P28290 1259 aa17.28■□□□□ 0.36
CUEDC1-213ENST00000585294 C1orf141Q5JVX7 400 aa17.28■□□□□ 0.36
CUEDC1-213ENST00000585294 NFATC2IPQ8NCF5 419 aa17.28■□□□□ 0.36
CUEDC1-213ENST00000585294 CD2APQ9Y5K6 639 aa17.27■□□□□ 0.36
CUEDC1-213ENST00000585294 PTCD1O75127 700 aaKnown RBP17.26■□□□□ 0.35
CUEDC1-213ENST00000585294 UBR3Q6ZT12 1888 aa17.26■□□□□ 0.35
CUEDC1-213ENST00000585294 LGR6Q9HBX8 967 aa17.25■□□□□ 0.35
CUEDC1-213ENST00000585294 TRAPPC3LQ5T215 181 aa17.24■□□□□ 0.35
CUEDC1-213ENST00000585294 WWC3Q9ULE0 1092 aa17.24■□□□□ 0.35
CUEDC1-213ENST00000585294 DIAPH1O60610 1272 aaKnown RBP17.23■□□□□ 0.35
CUEDC1-213ENST00000585294 RC3H1Q5TC82 1133 aaKnown RBP17.23■□□□□ 0.35
CUEDC1-213ENST00000585294 ARHGEF1Q92888 912 aaKnown RBP17.23■□□□□ 0.35
CUEDC1-213ENST00000585294 RTCBQ9Y3I0 505 aaKnown RBP17.23■□□□□ 0.35
CUEDC1-213ENST00000585294 MTHFSDQ2M296 383 aaKnown RBP17.22■□□□□ 0.35
CUEDC1-213ENST00000585294 AKAP4Q5JQC9 854 aa17.22■□□□□ 0.35
CUEDC1-213ENST00000585294 RPS6KA4O75676 772 aa17.21■□□□□ 0.35
CUEDC1-213ENST00000585294 MMP10P09238 476 aa17.21■□□□□ 0.35
CUEDC1-213ENST00000585294 CNTNAP4Q9C0A0 1308 aa17.21■□□□□ 0.34
CUEDC1-213ENST00000585294 GRIN3BO60391 1043 aa17.2■□□□□ 0.34
CUEDC1-213ENST00000585294 RNMTO43148 476 aaKnown RBP17.19■□□□□ 0.34
CUEDC1-213ENST00000585294 SLC52A2Q9HAB3 445 aa17.19■□□□□ 0.34
CUEDC1-213ENST00000585294 NPC1L1Q9UHC9 1359 aa17.18■□□□□ 0.34
CUEDC1-213ENST00000585294 GYS1P13807 737 aa17.18■□□□□ 0.34
CUEDC1-213ENST00000585294 CRKLP46109 303 aaKnown RBP17.18■□□□□ 0.34
CUEDC1-213ENST00000585294 SLC39A6Q13433 755 aa17.18■□□□□ 0.34
CUEDC1-213ENST00000585294 CHD4Q14839 1912 aa17.17■□□□□ 0.34
CUEDC1-213ENST00000585294 U2SURPO15042 1029 aaKnown RBP17.17■□□□□ 0.34
CUEDC1-213ENST00000585294 ADRA2BP18089 450 aa17.17■□□□□ 0.34
CUEDC1-213ENST00000585294 RFC4P35249 363 aa17.17■□□□□ 0.34
CUEDC1-213ENST00000585294 INTS5Q6P9B9 1019 aaKnown RBP17.17■□□□□ 0.34
CUEDC1-213ENST00000585294 DNAJC10Q8IXB1 793 aa17.17■□□□□ 0.34
CUEDC1-213ENST00000585294 NLGN1Q8N2Q7 840 aa17.17■□□□□ 0.34
CUEDC1-213ENST00000585294 SRP68Q9UHB9 627 aaKnown RBP17.17■□□□□ 0.34
CUEDC1-213ENST00000585294 GOLGB1Q14789 3259 aaKnown RBP17.16■□□□□ 0.34
CUEDC1-213ENST00000585294 COL3A1P02461 1466 aaPredicted RBP17.16■□□□□ 0.34
CUEDC1-213ENST00000585294 ZNF831Q5JPB2 1677 aa17.16■□□□□ 0.34
CUEDC1-213ENST00000585294 COL5A3P25940 1745 aaPredicted RBP17.14■□□□□ 0.33
CUEDC1-213ENST00000585294 MYH14Q7Z406 1995 aaKnown RBP17.14■□□□□ 0.33
CUEDC1-213ENST00000585294 SCN11AQ9UI33 1791 aa17.13■□□□□ 0.33
CUEDC1-213ENST00000585294 A0A0G2JLW4 131 aa17.13■□□□□ 0.33
CUEDC1-213ENST00000585294 FKBP8Q14318 412 aa17.13■□□□□ 0.33
CUEDC1-213ENST00000585294 IL17REQ8NFR9 667 aa17.13■□□□□ 0.33
CUEDC1-213ENST00000585294 CYP19A1P11511 503 aaPredicted RBP17.12■□□□□ 0.33
CUEDC1-213ENST00000585294 PHACTR3Q96KR7 559 aa17.12■□□□□ 0.33
CUEDC1-213ENST00000585294 TJP1Q07157 1748 aa17.11■□□□□ 0.33
CUEDC1-213ENST00000585294 CCDC87Q9NVE4 849 aa17.11■□□□□ 0.33
CUEDC1-213ENST00000585294 PARP3Q9Y6F1 533 aa17.11■□□□□ 0.33
CUEDC1-213ENST00000585294 MRC1P22897 1456 aa17.11■□□□□ 0.33
CUEDC1-213ENST00000585294 CICQ96RK0 1608 aaPredicted RBP17.1■□□□□ 0.33
CUEDC1-213ENST00000585294 DPEP1P16444 411 aa17.1■□□□□ 0.33
CUEDC1-213ENST00000585294 PPP2R1AP30153 589 aa17.1■□□□□ 0.33
CUEDC1-213ENST00000585294 C1QTNF8P60827 252 aa17.1■□□□□ 0.33
CUEDC1-213ENST00000585294 DDR1Q08345 913 aa17.1■□□□□ 0.33
CUEDC1-213ENST00000585294 USP42Q9H9J4 1324 aaKnown RBP17.1■□□□□ 0.33
CUEDC1-213ENST00000585294 PXDNLA1KZ92 1463 aa17.1■□□□□ 0.33
CUEDC1-213ENST00000585294 TGFB2P61812 414 aa17.09■□□□□ 0.33
CUEDC1-213ENST00000585294 KCPQ6ZWJ8 1503 aa17.08■□□□□ 0.32
CUEDC1-213ENST00000585294 C10orf71Q711Q0 1435 aa17.08■□□□□ 0.32
CUEDC1-213ENST00000585294 SOS1Q07889 1333 aaPredicted RBP17.08■□□□□ 0.32
CUEDC1-213ENST00000585294 GNAT3A8MTJ3 354 aa17.08■□□□□ 0.32
CUEDC1-213ENST00000585294 PRKAR2BP31323 418 aa17.08■□□□□ 0.32
CUEDC1-213ENST00000585294 USPL1Q5W0Q7 1092 aa17.08■□□□□ 0.32
CUEDC1-213ENST00000585294 ZBTB1Q9Y2K1 713 aa17.08■□□□□ 0.32
CUEDC1-213ENST00000585294 ATP10DQ9P241 1426 aa17.07■□□□□ 0.32
CUEDC1-213ENST00000585294 GIGYF1O75420 1035 aaPredicted RBP17.07■□□□□ 0.32
CUEDC1-213ENST00000585294 TM4SF1P30408 202 aa17.07■□□□□ 0.32
CUEDC1-213ENST00000585294 GAS2L2Q8NHY3 880 aa17.07■□□□□ 0.32
CUEDC1-213ENST00000585294 CFAP53Q96M91 514 aa17.07■□□□□ 0.32
CUEDC1-213ENST00000585294 RSPH6AQ9H0K4 717 aa17.07■□□□□ 0.32
CUEDC1-213ENST00000585294 BCS1LQ9Y276 419 aa17.07■□□□□ 0.32
CUEDC1-213ENST00000585294 C4AP0C0L4 1744 aa17.07■□□□□ 0.32
CUEDC1-213ENST00000585294 ADAMTS7Q9UKP4 1686 aa17.07■□□□□ 0.32
CUEDC1-213ENST00000585294 KCNA3P22001 575 aa17.06■□□□□ 0.32
CUEDC1-213ENST00000585294 CANXP27824 592 aaKnown RBP17.06■□□□□ 0.32
CUEDC1-213ENST00000585294 ZNF526Q8TF50 670 aaPredicted RBP17.06■□□□□ 0.32
CUEDC1-213ENST00000585294 ZNF496Q96IT1 587 aaPredicted RBP17.06■□□□□ 0.32
CUEDC1-213ENST00000585294 KCNQ3O43525 872 aa17.05■□□□□ 0.32
CUEDC1-213ENST00000585294 ZPR1O75312 459 aa17.05■□□□□ 0.32
CUEDC1-213ENST00000585294 TEFQ10587 303 aa17.05■□□□□ 0.32
CUEDC1-213ENST00000585294 VSIG10Q8N0Z9 540 aa17.05■□□□□ 0.32
CUEDC1-213ENST00000585294 BCL2L12Q9HB09 334 aa17.05■□□□□ 0.32
CUEDC1-213ENST00000585294 KIAA1551Q9HCM1 1747 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms