RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 AMOTQ4VCS5 1084 aa27.82■■■□□ 2.04
TOP3A-219ENST00000584887 SULT6B1Q6IMI4 303 aa27.82■■■□□ 2.04
TOP3A-219ENST00000584887 DCAF5Q96JK2 942 aa27.82■■■□□ 2.04
TOP3A-219ENST00000584887 CHD4Q14839 1912 aa27.82■■■□□ 2.04
TOP3A-219ENST00000584887 UBR3Q6ZT12 1888 aa27.81■■■□□ 2.04
TOP3A-219ENST00000584887 ERVV-2B6SEH9 535 aa27.81■■■□□ 2.04
TOP3A-219ENST00000584887 C1orf141Q5JVX7 400 aa27.81■■■□□ 2.04
TOP3A-219ENST00000584887 ZNF784Q8NCA9 323 aaPredicted RBP27.8■■■□□ 2.04
TOP3A-219ENST00000584887 RBM42Q9BTD8 480 aaKnown RBP27.8■■■□□ 2.04
TOP3A-219ENST00000584887 KDM6AO15550 1401 aaPredicted RBP27.79■■■□□ 2.04
TOP3A-219ENST00000584887 SSFA2P28290 1259 aa27.79■■■□□ 2.04
TOP3A-219ENST00000584887 CABP4P57796 275 aa27.79■■■□□ 2.04
TOP3A-219ENST00000584887 IL13P35225 146 aa27.78■■■□□ 2.04
TOP3A-219ENST00000584887 MTHFSP49914 203 aa27.77■■■□□ 2.04
TOP3A-219ENST00000584887 CC2D1BQ5T0F9 858 aaKnown RBP27.77■■■□□ 2.04
TOP3A-219ENST00000584887 CNGB1Q14028 1251 aaPredicted RBP27.76■■■□□ 2.03
TOP3A-219ENST00000584887 KDRP35968 1356 aa27.75■■■□□ 2.03
TOP3A-219ENST00000584887 CD2APQ9Y5K6 639 aa27.74■■■□□ 2.03
TOP3A-219ENST00000584887 YBX3P16989 372 aaKnown RBP eCLIP27.73■■■□□ 2.03
TOP3A-219ENST00000584887 SLC4A9Q96Q91 983 aa27.72■■■□□ 2.03
TOP3A-219ENST00000584887 PTCD1O75127 700 aaKnown RBP27.7■■■□□ 2.02
TOP3A-219ENST00000584887 HMOX1P09601 288 aa27.7■■■□□ 2.02
TOP3A-219ENST00000584887 RTCBQ9Y3I0 505 aaKnown RBP27.7■■■□□ 2.02
TOP3A-219ENST00000584887 PER1O15534 1290 aaPredicted RBP27.69■■■□□ 2.02
TOP3A-219ENST00000584887 GRIN3BO60391 1043 aa27.69■■■□□ 2.02
TOP3A-219ENST00000584887 NFATC2IPQ8NCF5 419 aa27.69■■■□□ 2.02
TOP3A-219ENST00000584887 TRAPPC3LQ5T215 181 aa27.67■■■□□ 2.02
TOP3A-219ENST00000584887 WWC3Q9ULE0 1092 aa27.67■■■□□ 2.02
TOP3A-219ENST00000584887 DIAPH1O60610 1272 aaKnown RBP27.65■■■□□ 2.02
TOP3A-219ENST00000584887 MMP10P09238 476 aa27.65■■■□□ 2.02
TOP3A-219ENST00000584887 CNTNAP4Q9C0A0 1308 aa27.65■■■□□ 2.02
TOP3A-219ENST00000584887 AKAP4Q5JQC9 854 aa27.64■■■□□ 2.02
TOP3A-219ENST00000584887 ZNF831Q5JPB2 1677 aa27.63■■■□□ 2.01
TOP3A-219ENST00000584887 RC3H1Q5TC82 1133 aaKnown RBP27.63■■■□□ 2.01
TOP3A-219ENST00000584887 COL5A3P25940 1745 aaPredicted RBP27.62■■■□□ 2.01
TOP3A-219ENST00000584887 SCN11AQ9UI33 1791 aa27.61■■■□□ 2.01
TOP3A-219ENST00000584887 RPS6KA4O75676 772 aa27.61■■■□□ 2.01
TOP3A-219ENST00000584887 ADRA2BP18089 450 aa27.61■■■□□ 2.01
TOP3A-219ENST00000584887 RFC4P35249 363 aa27.61■■■□□ 2.01
TOP3A-219ENST00000584887 ARHGEF1Q92888 912 aaKnown RBP27.61■■■□□ 2.01
TOP3A-219ENST00000584887 UTRNP46939 3433 aa27.61■■■□□ 2.01
TOP3A-219ENST00000584887 CRKLP46109 303 aaKnown RBP27.59■■■□□ 2.01
TOP3A-219ENST00000584887 LGR6Q9HBX8 967 aa27.59■■■□□ 2.01
TOP3A-219ENST00000584887 U2SURPO15042 1029 aaKnown RBP27.58■■■□□ 2.01
TOP3A-219ENST00000584887 NLGN1Q8N2Q7 840 aa27.58■■■□□ 2.01
TOP3A-219ENST00000584887 SLC52A2Q9HAB3 445 aa27.58■■■□□ 2.01
TOP3A-219ENST00000584887 MYH14Q7Z406 1995 aaKnown RBP27.58■■■□□ 2.01
TOP3A-219ENST00000584887 NPC1L1Q9UHC9 1359 aa27.58■■■□□ 2.01
TOP3A-219ENST00000584887 RNMTO43148 476 aaKnown RBP27.57■■■□□ 2
TOP3A-219ENST00000584887 MTHFSDQ2M296 383 aaKnown RBP27.57■■■□□ 2
TOP3A-219ENST00000584887 CICQ96RK0 1608 aaPredicted RBP27.56■■■□□ 2
TOP3A-219ENST00000584887 GYS1P13807 737 aa27.54■■■□□ 2
TOP3A-219ENST00000584887 TJP1Q07157 1748 aa27.54■■■□□ 2
TOP3A-219ENST00000584887 SLC39A6Q13433 755 aa27.54■■■□□ 2
TOP3A-219ENST00000584887 COL3A1P02461 1466 aaPredicted RBP27.53■■■□□ 2
TOP3A-219ENST00000584887 DNAJC10Q8IXB1 793 aa27.53■■■□□ 2
TOP3A-219ENST00000584887 SRP68Q9UHB9 627 aaKnown RBP27.52■■■□□ 2
TOP3A-219ENST00000584887 PARP3Q9Y6F1 533 aa27.52■■■□□ 2
TOP3A-219ENST00000584887 C4AP0C0L4 1744 aa27.52■■■□□ 2
TOP3A-219ENST00000584887 MRC1P22897 1456 aa27.51■■■□□ 2
TOP3A-219ENST00000584887 GIGYF1O75420 1035 aaPredicted RBP27.51■■□□□ 1.99
TOP3A-219ENST00000584887 CCDC87Q9NVE4 849 aa27.51■■□□□ 1.99
TOP3A-219ENST00000584887 GOLGB1Q14789 3259 aaKnown RBP27.5■■□□□ 1.99
TOP3A-219ENST00000584887 VIRMAQ69YN4 1812 aaKnown RBP27.5■■□□□ 1.99
TOP3A-219ENST00000584887 C1QTNF8P60827 252 aa27.49■■□□□ 1.99
TOP3A-219ENST00000584887 PXDNLA1KZ92 1463 aa27.49■■□□□ 1.99
TOP3A-219ENST00000584887 C10orf71Q711Q0 1435 aa27.49■■□□□ 1.99
TOP3A-219ENST00000584887 ATP10DQ9P241 1426 aa27.49■■□□□ 1.99
TOP3A-219ENST00000584887 INTS5Q6P9B9 1019 aaKnown RBP27.48■■□□□ 1.99
TOP3A-219ENST00000584887 USP42Q9H9J4 1324 aaKnown RBP27.47■■□□□ 1.99
TOP3A-219ENST00000584887 A0A0G2JLW4 131 aa27.47■■□□□ 1.99
TOP3A-219ENST00000584887 CFAP53Q96M91 514 aa27.47■■□□□ 1.99
TOP3A-219ENST00000584887 FKBP8Q14318 412 aa27.46■■□□□ 1.99
TOP3A-219ENST00000584887 TGFB2P61812 414 aa27.45■■□□□ 1.98
TOP3A-219ENST00000584887 GAS2L2Q8NHY3 880 aa27.45■■□□□ 1.98
TOP3A-219ENST00000584887 BCS1LQ9Y276 419 aa27.45■■□□□ 1.98
TOP3A-219ENST00000584887 KIF13BQ9NQT8 1826 aa27.45■■□□□ 1.98
TOP3A-219ENST00000584887 KCPQ6ZWJ8 1503 aa27.45■■□□□ 1.98
TOP3A-219ENST00000584887 N4BP2Q86UW6 1770 aaPredicted RBP27.45■■□□□ 1.98
TOP3A-219ENST00000584887 SENP3-EIF4A1A0A087X0R7 540 aa27.44■■□□□ 1.98
TOP3A-219ENST00000584887 ZNF526Q8TF50 670 aaPredicted RBP27.44■■□□□ 1.98
TOP3A-219ENST00000584887 ADAMTS7Q9UKP4 1686 aa27.43■■□□□ 1.98
TOP3A-219ENST00000584887 ZPR1O75312 459 aa27.43■■□□□ 1.98
TOP3A-219ENST00000584887 CYP19A1P11511 503 aaPredicted RBP27.43■■□□□ 1.98
TOP3A-219ENST00000584887 DPEP1P16444 411 aa27.43■■□□□ 1.98
TOP3A-219ENST00000584887 TTC5Q8N0Z6 440 aa27.43■■□□□ 1.98
TOP3A-219ENST00000584887 SOS1Q07889 1333 aaPredicted RBP27.42■■□□□ 1.98
TOP3A-219ENST00000584887 GNAT3A8MTJ3 354 aa27.42■■□□□ 1.98
TOP3A-219ENST00000584887 TEFQ10587 303 aa27.42■■□□□ 1.98
TOP3A-219ENST00000584887 DDR1Q08345 913 aa27.41■■□□□ 1.98
TOP3A-219ENST00000584887 KIAA1551Q9HCM1 1747 aa27.41■■□□□ 1.98
TOP3A-219ENST00000584887 PRKAR2BP31323 418 aa27.4■■□□□ 1.98
TOP3A-219ENST00000584887 USPL1Q5W0Q7 1092 aa27.4■■□□□ 1.98
TOP3A-219ENST00000584887 GPBP1L1Q9HC44 474 aaPredicted RBP27.4■■□□□ 1.98
TOP3A-219ENST00000584887 ZBTB1Q9Y2K1 713 aa27.4■■□□□ 1.98
TOP3A-219ENST00000584887 NUDCQ9Y266 331 aa27.39■■□□□ 1.98
TOP3A-219ENST00000584887 ADCY9O60503 1353 aa27.38■■□□□ 1.97
TOP3A-219ENST00000584887 COL15A1P39059 1388 aa27.38■■□□□ 1.97
TOP3A-219ENST00000584887 FCHSD2O94868 740 aa27.38■■□□□ 1.97
TOP3A-219ENST00000584887 IL17REQ8NFR9 667 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms