RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-229ENST00000584754 ITGA6P23229 1130 aa7.11□□□□□ -1.27
PPP4R1-229ENST00000584754 GTF2IP78347 998 aa7.11□□□□□ -1.27
PPP4R1-229ENST00000584754 GAS2L1Q99501 681 aaPredicted RBP7.11□□□□□ -1.27
PPP4R1-229ENST00000584754 FHDC1Q9C0D6 1143 aaPredicted RBP7.11□□□□□ -1.27
PPP4R1-229ENST00000584754 USP17L3A6NCW0 530 aa7.1□□□□□ -1.27
PPP4R1-229ENST00000584754 USP17L4A6NCW7 530 aa7.1□□□□□ -1.27
PPP4R1-229ENST00000584754 INHAP05111 366 aa7.1□□□□□ -1.27
PPP4R1-229ENST00000584754 GPC1P35052 558 aa7.1□□□□□ -1.27
PPP4R1-229ENST00000584754 PSME1Q06323 249 aa7.1□□□□□ -1.27
PPP4R1-229ENST00000584754 TLR1Q15399 786 aa7.1□□□□□ -1.27
PPP4R1-229ENST00000584754 ESCO1Q5FWF5 840 aa7.1□□□□□ -1.27
PPP4R1-229ENST00000584754 TMEM214Q6NUQ4 689 aaKnown RBP7.1□□□□□ -1.27
PPP4R1-229ENST00000584754 USP17L2Q6R6M4 530 aa7.1□□□□□ -1.27
PPP4R1-229ENST00000584754 RIPOR1Q6ZS17 1223 aa7.1□□□□□ -1.27
PPP4R1-229ENST00000584754 USP17L1Q7RTZ2 530 aa7.1□□□□□ -1.27
PPP4R1-229ENST00000584754 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.1□□□□□ -1.27
PPP4R1-229ENST00000584754 NFATC2IPQ8NCF5 419 aa7.1□□□□□ -1.27
PPP4R1-229ENST00000584754 CNTNAP3BQ96NU0 1288 aa7.1□□□□□ -1.27
PPP4R1-229ENST00000584754 ZSCAN10Q96SZ4 725 aaPredicted RBP7.1□□□□□ -1.27
PPP4R1-229ENST00000584754 CNTNAP3Q9BZ76 1288 aa7.1□□□□□ -1.27
PPP4R1-229ENST00000584754 KIAA1024Q9UPX6 916 aa7.1□□□□□ -1.27
PPP4R1-229ENST00000584754 NOD1Q9Y239 953 aa7.1□□□□□ -1.27
PPP4R1-229ENST00000584754 ATP9BO43861 1147 aa7.09□□□□□ -1.27
PPP4R1-229ENST00000584754 CLDN10P78369 228 aa7.09□□□□□ -1.27
PPP4R1-229ENST00000584754 RASSF7Q02833 373 aa7.09□□□□□ -1.27
PPP4R1-229ENST00000584754 TIMMDC1Q9NPL8 285 aa7.09□□□□□ -1.27
PPP4R1-229ENST00000584754 USP3Q9Y6I4 520 aa7.09□□□□□ -1.27
PPP4R1-229ENST00000584754 PALM3A6NDB9 673 aaPredicted RBP7.08□□□□□ -1.28
PPP4R1-229ENST00000584754 RNF225M0QZC1 329 aaPredicted RBP7.08□□□□□ -1.28
PPP4R1-229ENST00000584754 WASLO00401 505 aaPredicted RBP7.08□□□□□ -1.28
PPP4R1-229ENST00000584754 ZBTB7BO15156 539 aaPredicted RBP7.08□□□□□ -1.28
PPP4R1-229ENST00000584754 KRT76Q01546 638 aa7.08□□□□□ -1.28
PPP4R1-229ENST00000584754 DBN1Q16643 649 aa7.08□□□□□ -1.28
PPP4R1-229ENST00000584754 C4orf17Q53FE4 359 aa7.08□□□□□ -1.28
PPP4R1-229ENST00000584754 TAS1R3Q7RTX0 852 aa7.08□□□□□ -1.28
PPP4R1-229ENST00000584754 GPAMQ9HCL2 828 aa7.08□□□□□ -1.28
PPP4R1-229ENST00000584754 MKRN1Q9UHC7 482 aaKnown RBP7.08□□□□□ -1.28
PPP4R1-229ENST00000584754 SPATA31C2B4DYI2 1134 aa7.07□□□□□ -1.28
PPP4R1-229ENST00000584754 GPR25O00155 361 aa7.07□□□□□ -1.28
PPP4R1-229ENST00000584754 SMTNP53814 917 aa7.07□□□□□ -1.28
PPP4R1-229ENST00000584754 RNFT1Q5M7Z0 435 aa7.07□□□□□ -1.28
PPP4R1-229ENST00000584754 TBCELQ5QJ74 424 aa7.07□□□□□ -1.28
PPP4R1-229ENST00000584754 PPP1R12CQ9BZL4 782 aa7.07□□□□□ -1.28
PPP4R1-229ENST00000584754 ADAMTS8Q9UP79 889 aa7.07□□□□□ -1.28
PPP4R1-229ENST00000584754 PARP3Q9Y6F1 533 aa7.07□□□□□ -1.28
PPP4R1-229ENST00000584754 LGR5O75473 907 aa7.06□□□□□ -1.28
PPP4R1-229ENST00000584754 GTF2E1P29083 439 aaPredicted RBP7.06□□□□□ -1.28
PPP4R1-229ENST00000584754 CDCA8Q53HL2 280 aa7.06□□□□□ -1.28
PPP4R1-229ENST00000584754 SV2AQ7L0J3 742 aa7.06□□□□□ -1.28
PPP4R1-229ENST00000584754 TNS4Q8IZW8 715 aa7.06□□□□□ -1.28
PPP4R1-229ENST00000584754 OGFOD1Q8N543 542 aa7.06□□□□□ -1.28
PPP4R1-229ENST00000584754 ZNF594Q96JF6 807 aaPredicted RBP7.06□□□□□ -1.28
PPP4R1-229ENST00000584754 COL25A1Q9BXS0 654 aaPredicted RBP7.06□□□□□ -1.28
PPP4R1-229ENST00000584754 ZMYND15Q9H091 742 aa7.06□□□□□ -1.28
PPP4R1-229ENST00000584754 ZNF358Q9NW07 568 aa7.06□□□□□ -1.28
PPP4R1-229ENST00000584754 MAFBQ9Y5Q3 323 aaPredicted RBP7.06□□□□□ -1.28
PPP4R1-229ENST00000584754 RFX1P22670 979 aa7.05□□□□□ -1.28
PPP4R1-229ENST00000584754 LMOD1P29536 600 aaPredicted RBP7.05□□□□□ -1.28
PPP4R1-229ENST00000584754 GSK3AP49840 483 aa7.05□□□□□ -1.28
PPP4R1-229ENST00000584754 GNASQ5JWF2 1037 aa7.05□□□□□ -1.28
PPP4R1-229ENST00000584754 PPARGC1BQ86YN6 1023 aaKnown RBP7.05□□□□□ -1.28
PPP4R1-229ENST00000584754 PLEKHM2Q8IWE5 1019 aa7.05□□□□□ -1.28
PPP4R1-229ENST00000584754 SVOPQ8N4V2 548 aa7.05□□□□□ -1.28
PPP4R1-229ENST00000584754 TPCN2Q8NHX9 752 aa7.05□□□□□ -1.28
PPP4R1-229ENST00000584754 NANOS1Q8WY41 292 aaKnown RBP7.05□□□□□ -1.28
PPP4R1-229ENST00000584754 DYRK1BQ9Y463 629 aa7.05□□□□□ -1.28
PPP4R1-229ENST00000584754 A6NJY4 79 aa7.04□□□□□ -1.28
PPP4R1-229ENST00000584754 SFI1A8K8P3 1242 aa7.04□□□□□ -1.28
PPP4R1-229ENST00000584754 LZTS3O60299 673 aaPredicted RBP7.04□□□□□ -1.28
PPP4R1-229ENST00000584754 THBS1P07996 1170 aa7.04□□□□□ -1.28
PPP4R1-229ENST00000584754 PLA2G4AP47712 749 aa7.04□□□□□ -1.28
PPP4R1-229ENST00000584754 CCDC102BQ68D86 513 aa7.04□□□□□ -1.28
PPP4R1-229ENST00000584754 GAS2L2Q8NHY3 880 aa7.04□□□□□ -1.28
PPP4R1-229ENST00000584754 GTPBP3Q969Y2 492 aaKnown RBP7.04□□□□□ -1.28
PPP4R1-229ENST00000584754 AIDAQ96BJ3 306 aa7.04□□□□□ -1.28
PPP4R1-229ENST00000584754 RUBCNLQ9H714 662 aa7.04□□□□□ -1.28
PPP4R1-229ENST00000584754 DNAAF2Q9NVR5 837 aaKnown RBP7.04□□□□□ -1.28
PPP4R1-229ENST00000584754 ARID3CA6NKF2 412 aa7.03□□□□□ -1.28
PPP4R1-229ENST00000584754 F11P03951 625 aa7.03□□□□□ -1.28
PPP4R1-229ENST00000584754 RASA1P20936 1047 aa7.03□□□□□ -1.28
PPP4R1-229ENST00000584754 MSX1P28360 303 aa7.03□□□□□ -1.28
PPP4R1-229ENST00000584754 RHBDD1Q8TEB9 315 aa7.03□□□□□ -1.28
PPP4R1-229ENST00000584754 ZNF837Q96EG3 531 aaPredicted RBP7.03□□□□□ -1.28
PPP4R1-229ENST00000584754 SLC4A9Q96Q91 983 aa7.03□□□□□ -1.28
PPP4R1-229ENST00000584754 IRS1P35568 1242 aa7.02□□□□□ -1.29
PPP4R1-229ENST00000584754 KANK4Q5T7N3 995 aaPredicted RBP7.02□□□□□ -1.29
PPP4R1-229ENST00000584754 GPAT2Q6NUI2 795 aa7.02□□□□□ -1.29
PPP4R1-229ENST00000584754 TRIM50Q86XT4 487 aa7.02□□□□□ -1.29
PPP4R1-229ENST00000584754 TRIM22Q8IYM9 498 aa7.02□□□□□ -1.29
PPP4R1-229ENST00000584754 CABP1Q9NZU7 370 aa7.02□□□□□ -1.29
PPP4R1-229ENST00000584754 IQSEC3Q9UPP2 1182 aaPredicted RBP7.02□□□□□ -1.29
PPP4R1-229ENST00000584754 CDK2AP1O14519 115 aa7.01□□□□□ -1.29
PPP4R1-229ENST00000584754 DKK1O94907 266 aa7.01□□□□□ -1.29
PPP4R1-229ENST00000584754 MARSP56192 900 aaKnown RBP7.01□□□□□ -1.29
PPP4R1-229ENST00000584754 GAS6Q14393 721 aa7.01□□□□□ -1.29
PPP4R1-229ENST00000584754 MTFR1Q15390 333 aa7.01□□□□□ -1.29
PPP4R1-229ENST00000584754 CRTC2Q53ET0 693 aaPredicted RBP7.01□□□□□ -1.29
PPP4R1-229ENST00000584754 WDR44Q5JSH3 913 aa7.01□□□□□ -1.29
PPP4R1-229ENST00000584754 CFAP70Q5T0N1 1121 aa7.01□□□□□ -1.29
PPP4R1-229ENST00000584754 SH3PXD2AQ5TCZ1 1133 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms