RNA–Protein interactions for RNA: ENST00000584506.1

CDH8-212, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-212ENST00000584506 NKX1-1Q15270 411 aaPredicted RBP8.73□□□□□ -1.01
CDH8-212ENST00000584506 MICALL2Q8IY33 904 aa8.73□□□□□ -1.01
CDH8-212ENST00000584506 LTV1Q96GA3 475 aaPredicted RBP8.73□□□□□ -1.01
CDH8-212ENST00000584506 RRP7AQ9Y3A4 280 aaKnown RBP8.73□□□□□ -1.01
CDH8-212ENST00000584506 CPDO75976 1380 aa8.73□□□□□ -1.01
CDH8-212ENST00000584506 KDRP35968 1356 aa8.73□□□□□ -1.01
CDH8-212ENST00000584506 SLFN5Q08AF3 891 aa8.72□□□□□ -1.01
CDH8-212ENST00000584506 CABLES1Q8TDN4 633 aa8.72□□□□□ -1.01
CDH8-212ENST00000584506 ANKRD24Q8TF21 1146 aa8.72□□□□□ -1.01
CDH8-212ENST00000584506 CDCA7LQ96GN5 454 aa8.72□□□□□ -1.01
CDH8-212ENST00000584506 UBAP1LF5GYI3 381 aa8.71□□□□□ -1.02
CDH8-212ENST00000584506 AEBP1Q8IUX7 1158 aa8.71□□□□□ -1.02
CDH8-212ENST00000584506 TRMT2AQ8IZ69 625 aaKnown RBP8.71□□□□□ -1.02
CDH8-212ENST00000584506 PHACTR3Q96KR7 559 aa8.71□□□□□ -1.02
CDH8-212ENST00000584506 MYH16Q9H6N6 1097 aa8.71□□□□□ -1.02
CDH8-212ENST00000584506 SUPT16HQ9Y5B9 1047 aaKnown RBP8.71□□□□□ -1.02
CDH8-212ENST00000584506 COL22A1Q8NFW1 1626 aaPredicted RBP8.71□□□□□ -1.02
CDH8-212ENST00000584506 IL16Q14005 1332 aa8.71□□□□□ -1.02
CDH8-212ENST00000584506 CAMTA1Q9Y6Y1 1673 aa8.7□□□□□ -1.02
CDH8-212ENST00000584506 PPP1R37O75864 691 aa8.7□□□□□ -1.02
CDH8-212ENST00000584506 DUSP27Q5VZP5 1158 aa8.7□□□□□ -1.02
CDH8-212ENST00000584506 GAS2L2Q8NHY3 880 aa8.7□□□□□ -1.02
CDH8-212ENST00000584506 CERKQ8TCT0 537 aa8.7□□□□□ -1.02
CDH8-212ENST00000584506 PRDM11Q9NQV5 511 aa8.7□□□□□ -1.02
CDH8-212ENST00000584506 GTF3C3Q9Y5Q9 886 aa8.7□□□□□ -1.02
CDH8-212ENST00000584506 KIAA0232Q92628 1395 aa8.7□□□□□ -1.02
CDH8-212ENST00000584506 PIP4K2BP78356 416 aa8.69□□□□□ -1.02
CDH8-212ENST00000584506 NBPF6Q5VWK0 638 aa8.69□□□□□ -1.02
CDH8-212ENST00000584506 MARVELD3Q96A59 401 aa8.69□□□□□ -1.02
CDH8-212ENST00000584506 NBPF4Q96M43 638 aa8.69□□□□□ -1.02
CDH8-212ENST00000584506 RCAN3Q9UKA8 241 aa8.69□□□□□ -1.02
CDH8-212ENST00000584506 AXIN2Q9Y2T1 843 aa8.69□□□□□ -1.02
CDH8-212ENST00000584506 COL16A1Q07092 1604 aaPredicted RBP8.69□□□□□ -1.02
CDH8-212ENST00000584506 VIRMAQ69YN4 1812 aaKnown RBP8.68□□□□□ -1.02
CDH8-212ENST00000584506 HTATSF1O43719 755 aaKnown RBP8.68□□□□□ -1.02
CDH8-212ENST00000584506 CSB-PGBD3P0DP91 1061 aa8.68□□□□□ -1.02
CDH8-212ENST00000584506 EMP3P54852 163 aa8.68□□□□□ -1.02
CDH8-212ENST00000584506 CHRNA2Q15822 529 aa8.68□□□□□ -1.02
CDH8-212ENST00000584506 AMOTQ4VCS5 1084 aa8.68□□□□□ -1.02
CDH8-212ENST00000584506 TMEM92Q6UXU6 159 aa8.68□□□□□ -1.02
CDH8-212ENST00000584506 RTF1Q92541 710 aaKnown RBP8.68□□□□□ -1.02
CDH8-212ENST00000584506 ERBB3P21860 1342 aa8.68□□□□□ -1.02
CDH8-212ENST00000584506 NCAPD2Q15021 1401 aa8.68□□□□□ -1.02
CDH8-212ENST00000584506 LMO7Q8WWI1 1683 aa8.68□□□□□ -1.02
CDH8-212ENST00000584506 COL14A1Q05707 1796 aaKnown RBP8.68□□□□□ -1.02
CDH8-212ENST00000584506 GNAI1P63096 354 aa8.67□□□□□ -1.02
CDH8-212ENST00000584506 DOK7Q18PE1 504 aa8.67□□□□□ -1.02
CDH8-212ENST00000584506 MTHFSDQ2M296 383 aaKnown RBP8.67□□□□□ -1.02
CDH8-212ENST00000584506 PLEKHO1Q53GL0 409 aaPredicted RBP8.67□□□□□ -1.02
CDH8-212ENST00000584506 NLRP2Q9NX02 1062 aa8.67□□□□□ -1.02
CDH8-212ENST00000584506 PLEKHG2Q9H7P9 1386 aa8.66□□□□□ -1.02
CDH8-212ENST00000584506 GNAT3A8MTJ3 354 aa8.66□□□□□ -1.02
CDH8-212ENST00000584506 CT47B1P0C2W7 299 aaPredicted RBP8.66□□□□□ -1.02
CDH8-212ENST00000584506 EVA1CP58658 441 aa8.66□□□□□ -1.02
CDH8-212ENST00000584506 USHBP1Q8N6Y0 703 aa8.66□□□□□ -1.02
CDH8-212ENST00000584506 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.66□□□□□ -1.02
CDH8-212ENST00000584506 RAPGEF4Q8WZA2 1011 aa8.66□□□□□ -1.02
CDH8-212ENST00000584506 IFT57Q9NWB7 429 aa8.66□□□□□ -1.02
CDH8-212ENST00000584506 RNF123Q5XPI4 1314 aa8.65□□□□□ -1.02
CDH8-212ENST00000584506 WDR17Q8IZU2 1322 aa8.65□□□□□ -1.02
CDH8-212ENST00000584506 HOXB3P14651 431 aaPredicted RBP8.65□□□□□ -1.02
CDH8-212ENST00000584506 TATP17735 454 aaPredicted RBP8.65□□□□□ -1.02
CDH8-212ENST00000584506 ERICH6BQ5W0A0 696 aa8.65□□□□□ -1.02
CDH8-212ENST00000584506 ZNF710Q8N1W2 664 aa8.65□□□□□ -1.02
CDH8-212ENST00000584506 LAS1LQ9Y4W2 734 aaKnown RBP8.65□□□□□ -1.02
CDH8-212ENST00000584506 PARP4Q9UKK3 1724 aaKnown RBP8.65□□□□□ -1.03
CDH8-212ENST00000584506 COL5A2P05997 1499 aaPredicted RBP8.64□□□□□ -1.03
CDH8-212ENST00000584506 MAP3K5Q99683 1374 aa8.64□□□□□ -1.03
CDH8-212ENST00000584506 FAM83GA6ND36 823 aa8.64□□□□□ -1.03
CDH8-212ENST00000584506 RIMBP2O15034 1052 aa8.64□□□□□ -1.03
CDH8-212ENST00000584506 C1orf141Q5JVX7 400 aa8.64□□□□□ -1.03
CDH8-212ENST00000584506 TOM1L2Q6ZVM7 507 aa8.64□□□□□ -1.03
CDH8-212ENST00000584506 CFAP44Q96MT7 982 aa8.64□□□□□ -1.03
CDH8-212ENST00000584506 SPG7Q9UQ90 795 aa8.64□□□□□ -1.03
CDH8-212ENST00000584506 FANCIQ9NVI1 1328 aa8.63□□□□□ -1.03
CDH8-212ENST00000584506 ZNF853P0CG23 659 aa8.63□□□□□ -1.03
CDH8-212ENST00000584506 AKAP4Q5JQC9 854 aa8.63□□□□□ -1.03
CDH8-212ENST00000584506 ZNF530Q6P9A1 599 aaPredicted RBP8.63□□□□□ -1.03
CDH8-212ENST00000584506 ZNF428Q96B54 188 aa8.63□□□□□ -1.03
CDH8-212ENST00000584506 CARD10Q9BWT7 1032 aa8.63□□□□□ -1.03
CDH8-212ENST00000584506 BABAM1Q9NWV8 329 aa8.63□□□□□ -1.03
CDH8-212ENST00000584506 PKD1L3Q7Z443 1732 aa8.63□□□□□ -1.03
CDH8-212ENST00000584506 NWD2Q9ULI1 1742 aa8.63□□□□□ -1.03
CDH8-212ENST00000584506 PLCH1Q4KWH8 1693 aa8.62□□□□□ -1.03
CDH8-212ENST00000584506 JCADQ9P266 1359 aa8.62□□□□□ -1.03
CDH8-212ENST00000584506 RRP1P56182 461 aaKnown RBP8.62□□□□□ -1.03
CDH8-212ENST00000584506 EXOSC9Q06265 439 aaKnown RBP8.62□□□□□ -1.03
CDH8-212ENST00000584506 DCTN1Q14203 1278 aa8.62□□□□□ -1.03
CDH8-212ENST00000584506 MCM10Q7L590 875 aa8.62□□□□□ -1.03
CDH8-212ENST00000584506 TSR2Q969E8 191 aaKnown RBP8.62□□□□□ -1.03
CDH8-212ENST00000584506 THUMPD2Q9BTF0 503 aaKnown RBP8.62□□□□□ -1.03
CDH8-212ENST00000584506 STRN4Q9NRL3 753 aa8.62□□□□□ -1.03
CDH8-212ENST00000584506 BTG4Q9NY30 223 aa8.62□□□□□ -1.03
CDH8-212ENST00000584506 SCN11AQ9UI33 1791 aa8.62□□□□□ -1.03
CDH8-212ENST00000584506 CACNA1FO60840 1977 aa8.62□□□□□ -1.03
CDH8-212ENST00000584506 CRB1P82279 1406 aa8.62□□□□□ -1.03
CDH8-212ENST00000584506 LRRC37A3O60309 1634 aa8.62□□□□□ -1.03
CDH8-212ENST00000584506 CHL1O00533 1208 aa8.61□□□□□ -1.03
CDH8-212ENST00000584506 GTPBP6O43824 516 aaPredicted RBP8.61□□□□□ -1.03
CDH8-212ENST00000584506 HOXB1P14653 301 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms