RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 DPEP1P16444 411 aa15.65■□□□□ 0.1
CASC3-208ENST00000583649 RFC4P35249 363 aa15.65■□□□□ 0.1
CASC3-208ENST00000583649 DALRD3Q5D0E6 543 aaKnown RBP15.65■□□□□ 0.1
CASC3-208ENST00000583649 LINC00116Q8NCU8 138 aa15.65■□□□□ 0.1
CASC3-208ENST00000583649 ZC3H4Q9UPT8 1303 aaKnown RBP15.65■□□□□ 0.1
CASC3-208ENST00000583649 UBR3Q6ZT12 1888 aa15.64■□□□□ 0.09
CASC3-208ENST00000583649 AMIGO3Q86WK7 504 aa15.64■□□□□ 0.09
CASC3-208ENST00000583649 CYP27B1O15528 508 aa15.63■□□□□ 0.09
CASC3-208ENST00000583649 SMIM5Q71RC9 77 aa15.63■□□□□ 0.09
CASC3-208ENST00000583649 KCPQ6ZWJ8 1503 aa15.63■□□□□ 0.09
CASC3-208ENST00000583649 VEGFAP15692 232 aaPredicted RBP15.62■□□□□ 0.09
CASC3-208ENST00000583649 RRS1Q15050 365 aaKnown RBP15.62■□□□□ 0.09
CASC3-208ENST00000583649 NKX1-1Q15270 411 aaPredicted RBP15.62■□□□□ 0.09
CASC3-208ENST00000583649 INSRP06213 1382 aa15.62■□□□□ 0.09
CASC3-208ENST00000583649 KIF24Q5T7B8 1368 aa15.62■□□□□ 0.09
CASC3-208ENST00000583649 DCAF5Q96JK2 942 aa15.61■□□□□ 0.09
CASC3-208ENST00000583649 TOGARAM1Q9Y4F4 1720 aa15.6■□□□□ 0.09
CASC3-208ENST00000583649 KIF13BQ9NQT8 1826 aa15.6■□□□□ 0.09
CASC3-208ENST00000583649 SLC34A2O95436 690 aa15.6■□□□□ 0.09
CASC3-208ENST00000583649 FLT4P35916 1363 aa15.6■□□□□ 0.09
CASC3-208ENST00000583649 FBLN1P23142 703 aa15.59■□□□□ 0.09
CASC3-208ENST00000583649 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.59■□□□□ 0.09
CASC3-208ENST00000583649 TNRC6CQ9HCJ0 1690 aaKnown RBP15.59■□□□□ 0.09
CASC3-208ENST00000583649 RGPD2P0DJD1 1756 aa15.59■□□□□ 0.09
CASC3-208ENST00000583649 N4BP2Q86UW6 1770 aaPredicted RBP15.59■□□□□ 0.09
CASC3-208ENST00000583649 NEUROD1Q13562 356 aa15.58■□□□□ 0.08
CASC3-208ENST00000583649 ITPK1Q13572 414 aa15.58■□□□□ 0.08
CASC3-208ENST00000583649 RC3H1Q5TC82 1133 aaKnown RBP15.58■□□□□ 0.08
CASC3-208ENST00000583649 IFNL2Q8IZJ0 200 aa15.58■□□□□ 0.08
CASC3-208ENST00000583649 ASAP1Q9ULH1 1129 aa15.58■□□□□ 0.08
CASC3-208ENST00000583649 HSP90AB2PQ58FF8 381 aa15.57■□□□□ 0.08
CASC3-208ENST00000583649 ARHGEF1Q92888 912 aaKnown RBP15.57■□□□□ 0.08
CASC3-208ENST00000583649 PCDH10Q9P2E7 1040 aa15.57■□□□□ 0.08
CASC3-208ENST00000583649 GLTPD2A6NH11 291 aa15.56■□□□□ 0.08
CASC3-208ENST00000583649 GYS1P13807 737 aa15.56■□□□□ 0.08
CASC3-208ENST00000583649 DPY19L2Q6NUT2 758 aa15.56■□□□□ 0.08
CASC3-208ENST00000583649 AIDAQ96BJ3 306 aa15.56■□□□□ 0.08
CASC3-208ENST00000583649 ITGB4P16144 1822 aa15.55■□□□□ 0.08
CASC3-208ENST00000583649 RPS6KA4O75676 772 aa15.55■□□□□ 0.08
CASC3-208ENST00000583649 LMNB1P20700 586 aa15.55■□□□□ 0.08
CASC3-208ENST00000583649 KCNA3P22001 575 aa15.55■□□□□ 0.08
CASC3-208ENST00000583649 RBM42Q9BTD8 480 aaKnown RBP15.55■□□□□ 0.08
CASC3-208ENST00000583649 C4AP0C0L4 1744 aa15.54■□□□□ 0.08
CASC3-208ENST00000583649 PKD1L3Q7Z443 1732 aa15.54■□□□□ 0.08
CASC3-208ENST00000583649 CNTNAP4Q9C0A0 1308 aa15.54■□□□□ 0.08
CASC3-208ENST00000583649 GGNBP2Q9H3C7 697 aa15.54■□□□□ 0.08
CASC3-208ENST00000583649 PRDM10Q9NQV6 1147 aa15.54■□□□□ 0.08
CASC3-208ENST00000583649 ATG3Q9NT62 314 aa15.54■□□□□ 0.08
CASC3-208ENST00000583649 ARFGEF1Q9Y6D6 1849 aa15.54■□□□□ 0.08
CASC3-208ENST00000583649 FYB1O15117 783 aa15.53■□□□□ 0.08
CASC3-208ENST00000583649 HSP90AB1P08238 724 aaKnown RBP15.53■□□□□ 0.08
CASC3-208ENST00000583649 PCNTO95613 3336 aa15.52■□□□□ 0.08
CASC3-208ENST00000583649 KIAA1551Q9HCM1 1747 aa15.52■□□□□ 0.08
CASC3-208ENST00000583649 SIN3AQ96ST3 1273 aa15.52■□□□□ 0.08
CASC3-208ENST00000583649 CREBZFQ9NS37 354 aa15.52■□□□□ 0.08
CASC3-208ENST00000583649 ERVV-2B6SEH9 535 aa15.51■□□□□ 0.07
CASC3-208ENST00000583649 PPM1GO15355 546 aaPredicted RBP15.51■□□□□ 0.07
CASC3-208ENST00000583649 PHKG2P15735 406 aa15.51■□□□□ 0.07
CASC3-208ENST00000583649 MAP2P11137 1827 aaKnown RBP15.51■□□□□ 0.07
CASC3-208ENST00000583649 CTCFP49711 727 aaPredicted RBP15.5■□□□□ 0.07
CASC3-208ENST00000583649 BRCA1P38398 1863 aaKnown RBP15.49■□□□□ 0.07
CASC3-208ENST00000583649 ZPR1O75312 459 aa15.48■□□□□ 0.07
CASC3-208ENST00000583649 CHRNA5P30532 468 aa15.48■□□□□ 0.07
CASC3-208ENST00000583649 CDCA8Q53HL2 280 aa15.48■□□□□ 0.07
CASC3-208ENST00000583649 MKRN1Q9UHC7 482 aaKnown RBP15.48■□□□□ 0.07
CASC3-208ENST00000583649 TONSLQ96HA7 1378 aa15.48■□□□□ 0.07
CASC3-208ENST00000583649 KDRP35968 1356 aa15.47■□□□□ 0.07
CASC3-208ENST00000583649 CABP4P57796 275 aa15.46■□□□□ 0.07
CASC3-208ENST00000583649 CHADLQ6NUI6 762 aa15.46■□□□□ 0.07
CASC3-208ENST00000583649 TTLL6Q8N841 843 aa15.46■□□□□ 0.07
CASC3-208ENST00000583649 USP42Q9H9J4 1324 aaKnown RBP15.45■□□□□ 0.06
CASC3-208ENST00000583649 ZNF831Q5JPB2 1677 aa15.45■□□□□ 0.06
CASC3-208ENST00000583649 RASSF7Q02833 373 aa15.45■□□□□ 0.06
CASC3-208ENST00000583649 FKBP8Q14318 412 aa15.45■□□□□ 0.06
CASC3-208ENST00000583649 KDM6AO15550 1401 aaPredicted RBP15.44■□□□□ 0.06
CASC3-208ENST00000583649 ST20-MTHFSA0A0A6YYL1 179 aa15.44■□□□□ 0.06
CASC3-208ENST00000583649 FOXN1O15353 648 aa15.44■□□□□ 0.06
CASC3-208ENST00000583649 WASHC2AQ641Q2 1341 aa15.43■□□□□ 0.06
CASC3-208ENST00000583649 NCAPD2Q15021 1401 aa15.43■□□□□ 0.06
CASC3-208ENST00000583649 H0YIN7 160 aa15.43■□□□□ 0.06
CASC3-208ENST00000583649 CRKLP46109 303 aaKnown RBP15.43■□□□□ 0.06
CASC3-208ENST00000583649 DDR1Q08345 913 aa15.43■□□□□ 0.06
CASC3-208ENST00000583649 EYA1Q99502 592 aa15.43■□□□□ 0.06
CASC3-208ENST00000583649 EMILIN1Q9Y6C2 1016 aa15.43■□□□□ 0.06
CASC3-208ENST00000583649 IQCA1LA6NCM1 817 aa15.42■□□□□ 0.06
CASC3-208ENST00000583649 POLRMTO00411 1230 aaKnown RBP15.42■□□□□ 0.06
CASC3-208ENST00000583649 FAM161AQ3B820 660 aa15.42■□□□□ 0.06
CASC3-208ENST00000583649 ERFEQ4G0M1 354 aa15.42■□□□□ 0.06
CASC3-208ENST00000583649 PLEKHO1Q53GL0 409 aaPredicted RBP15.42■□□□□ 0.06
CASC3-208ENST00000583649 TESK2Q96S53 571 aa15.42■□□□□ 0.06
CASC3-208ENST00000583649 SRP68Q9UHB9 627 aaKnown RBP15.42■□□□□ 0.06
CASC3-208ENST00000583649 PDZRN3Q9UPQ7 1066 aa15.42■□□□□ 0.06
CASC3-208ENST00000583649 SBF1O95248 1867 aa15.42■□□□□ 0.06
CASC3-208ENST00000583649 CNTNAP1P78357 1384 aa15.41■□□□□ 0.06
CASC3-208ENST00000583649 PTCD1O75127 700 aaKnown RBP15.41■□□□□ 0.06
CASC3-208ENST00000583649 TM4SF1P30408 202 aa15.41■□□□□ 0.06
CASC3-208ENST00000583649 MLLT1Q03111 559 aaPredicted RBP15.41■□□□□ 0.06
CASC3-208ENST00000583649 AMOTQ4VCS5 1084 aa15.41■□□□□ 0.06
CASC3-208ENST00000583649 SLC4A9Q96Q91 983 aa15.41■□□□□ 0.06
CASC3-208ENST00000583649 C1orf141Q5JVX7 400 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms