RNA–Protein interactions for RNA: ENST00000582788.5

ERBB2-212, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-212ENST00000582788 AMOTQ4VCS5 1084 aa21.67■■□□□ 1.06
ERBB2-212ENST00000582788 CPDO75976 1380 aa21.67■■□□□ 1.06
ERBB2-212ENST00000582788 TAF7Q15545 349 aaPredicted RBP21.67■■□□□ 1.06
ERBB2-212ENST00000582788 ZNF530Q6P9A1 599 aaPredicted RBP21.67■■□□□ 1.06
ERBB2-212ENST00000582788 LGR6Q9HBX8 967 aa21.67■■□□□ 1.06
ERBB2-212ENST00000582788 ABCC6O95255 1503 aa21.66■■□□□ 1.06
ERBB2-212ENST00000582788 AKAP4Q5JQC9 854 aa21.66■■□□□ 1.06
ERBB2-212ENST00000582788 ABCC4O15439 1325 aa21.65■■□□□ 1.06
ERBB2-212ENST00000582788 BABAM1Q9NWV8 329 aa21.65■■□□□ 1.06
ERBB2-212ENST00000582788 FAM208AQ9UK61 1670 aaKnown RBP21.64■■□□□ 1.06
ERBB2-212ENST00000582788 ROBO1Q9Y6N7 1651 aa21.64■■□□□ 1.06
ERBB2-212ENST00000582788 SMC5Q8IY18 1101 aa21.64■■□□□ 1.05
ERBB2-212ENST00000582788 NHSL1Q5SYE7 1610 aa21.64■■□□□ 1.05
ERBB2-212ENST00000582788 ZBTB40Q9NUA8 1239 aa21.63■■□□□ 1.05
ERBB2-212ENST00000582788 NLRP2Q9NX02 1062 aa21.63■■□□□ 1.05
ERBB2-212ENST00000582788 API5Q9BZZ5 524 aaKnown RBP21.63■■□□□ 1.05
ERBB2-212ENST00000582788 MPRIPQ6WCQ1 1025 aa21.61■■□□□ 1.05
ERBB2-212ENST00000582788 CSB-PGBD3P0DP91 1061 aa21.6■■□□□ 1.05
ERBB2-212ENST00000582788 C1orf141Q5JVX7 400 aa21.6■■□□□ 1.05
ERBB2-212ENST00000582788 RGS12O14924 1447 aa21.6■■□□□ 1.05
ERBB2-212ENST00000582788 ZBTB7BO15156 539 aaPredicted RBP21.6■■□□□ 1.05
ERBB2-212ENST00000582788 C22orf23Q9BZE7 217 aa21.6■■□□□ 1.05
ERBB2-212ENST00000582788 ABCA3Q99758 1704 aa21.59■■□□□ 1.05
ERBB2-212ENST00000582788 RNMTO43148 476 aaKnown RBP21.59■■□□□ 1.05
ERBB2-212ENST00000582788 SLC4A2P04920 1241 aa21.59■■□□□ 1.05
ERBB2-212ENST00000582788 RAPGEF4Q8WZA2 1011 aa21.58■■□□□ 1.05
ERBB2-212ENST00000582788 MEGF6O75095 1541 aa21.58■■□□□ 1.04
ERBB2-212ENST00000582788 KDM3BQ7LBC6 1761 aa21.57■■□□□ 1.04
ERBB2-212ENST00000582788 PRDM11Q9NQV5 511 aa21.57■■□□□ 1.04
ERBB2-212ENST00000582788 PTPRCP08575 1304 aa21.57■■□□□ 1.04
ERBB2-212ENST00000582788 MFAP1P55081 439 aaKnown RBP21.56■■□□□ 1.04
ERBB2-212ENST00000582788 TEFQ10587 303 aa21.56■■□□□ 1.04
ERBB2-212ENST00000582788 OVOS2A0A0G2JMS6 1433 aa21.56■■□□□ 1.04
ERBB2-212ENST00000582788 HSPA1LP34931 641 aa21.56■■□□□ 1.04
ERBB2-212ENST00000582788 TATP17735 454 aaPredicted RBP21.55■■□□□ 1.04
ERBB2-212ENST00000582788 G2E3Q7L622 706 aa21.55■■□□□ 1.04
ERBB2-212ENST00000582788 SOS1Q07889 1333 aaPredicted RBP21.55■■□□□ 1.04
ERBB2-212ENST00000582788 ADAMTS7Q9UKP4 1686 aa21.55■■□□□ 1.04
ERBB2-212ENST00000582788 NUCB1Q02818 461 aa21.55■■□□□ 1.04
ERBB2-212ENST00000582788 EIF4A1P60842 406 aaKnown RBP21.54■■□□□ 1.04
ERBB2-212ENST00000582788 INTS3Q68E01 1043 aaKnown RBP21.54■■□□□ 1.04
ERBB2-212ENST00000582788 BTBD11A6QL63 1104 aa21.53■■□□□ 1.04
ERBB2-212ENST00000582788 KCNQ3O43525 872 aa21.53■■□□□ 1.04
ERBB2-212ENST00000582788 CCDC30Q5VVM6 783 aa21.53■■□□□ 1.04
ERBB2-212ENST00000582788 CHMP4BQ9H444 224 aaKnown RBP21.53■■□□□ 1.04
ERBB2-212ENST00000582788 NECTIN2Q92692 538 aa21.53■■□□□ 1.04
ERBB2-212ENST00000582788 STK31Q9BXU1 1019 aa21.53■■□□□ 1.04
ERBB2-212ENST00000582788 PHLPP1O60346 1717 aa21.52■■□□□ 1.04
ERBB2-212ENST00000582788 SIPA1L3O60292 1781 aaPredicted RBP21.51■■□□□ 1.03
ERBB2-212ENST00000582788 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.51■■□□□ 1.03
ERBB2-212ENST00000582788 COL5A2P05997 1499 aaPredicted RBP21.51■■□□□ 1.03
ERBB2-212ENST00000582788 WDR17Q8IZU2 1322 aa21.51■■□□□ 1.03
ERBB2-212ENST00000582788 C1orf115Q9H7X2 142 aa21.51■■□□□ 1.03
ERBB2-212ENST00000582788 SPG7Q9UQ90 795 aa21.51■■□□□ 1.03
ERBB2-212ENST00000582788 PLEKHG2Q9H7P9 1386 aa21.5■■□□□ 1.03
ERBB2-212ENST00000582788 PHKG2P15735 406 aa21.5■■□□□ 1.03
ERBB2-212ENST00000582788 FAM43AQ8N2R8 423 aa21.5■■□□□ 1.03
ERBB2-212ENST00000582788 CHMP5Q9NZZ3 219 aa21.5■■□□□ 1.03
ERBB2-212ENST00000582788 MCM4P33991 863 aa21.5■■□□□ 1.03
ERBB2-212ENST00000582788 KDM6AO15550 1401 aaPredicted RBP21.49■■□□□ 1.03
ERBB2-212ENST00000582788 PKD1L3Q7Z443 1732 aa21.49■■□□□ 1.03
ERBB2-212ENST00000582788 L1TD1Q5T7N2 865 aaKnown RBP21.49■■□□□ 1.03
ERBB2-212ENST00000582788 AHDC1Q5TGY3 1603 aaPredicted RBP21.48■■□□□ 1.03
ERBB2-212ENST00000582788 RBM25P49756 843 aaKnown RBP21.48■■□□□ 1.03
ERBB2-212ENST00000582788 HDGFL1Q5TGJ6 251 aa21.48■■□□□ 1.03
ERBB2-212ENST00000582788 SPRYD3Q8NCJ5 442 aa21.48■■□□□ 1.03
ERBB2-212ENST00000582788 SCN11AQ9UI33 1791 aa21.48■■□□□ 1.03
ERBB2-212ENST00000582788 FLIIQ13045 1269 aa21.48■■□□□ 1.03
ERBB2-212ENST00000582788 CHD1LQ86WJ1 897 aa21.48■■□□□ 1.03
ERBB2-212ENST00000582788 F6X3S4 739 aa21.47■■□□□ 1.03
ERBB2-212ENST00000582788 TOM1L2Q6ZVM7 507 aa21.47■■□□□ 1.03
ERBB2-212ENST00000582788 IFNL2Q8IZJ0 200 aa21.47■■□□□ 1.03
ERBB2-212ENST00000582788 CACNA1FO60840 1977 aa21.47■■□□□ 1.03
ERBB2-212ENST00000582788 CYP27B1O15528 508 aa21.46■■□□□ 1.03
ERBB2-212ENST00000582788 HOXB7P09629 217 aa21.46■■□□□ 1.03
ERBB2-212ENST00000582788 LNPKQ9C0E8 428 aa21.46■■□□□ 1.03
ERBB2-212ENST00000582788 HSCBQ8IWL3 235 aa21.46■■□□□ 1.03
ERBB2-212ENST00000582788 COL16A1Q07092 1604 aaPredicted RBP21.46■■□□□ 1.03
ERBB2-212ENST00000582788 EIF2S2P20042 333 aaKnown RBP21.45■■□□□ 1.02
ERBB2-212ENST00000582788 SIRT2Q8IXJ6 389 aa21.45■■□□□ 1.02
ERBB2-212ENST00000582788 FKBP5Q13451 457 aaPredicted RBP21.44■■□□□ 1.02
ERBB2-212ENST00000582788 BMP2KLQ5H9B9 411 aa21.44■■□□□ 1.02
ERBB2-212ENST00000582788 SNX21Q969T3 373 aa21.44■■□□□ 1.02
ERBB2-212ENST00000582788 SLC52A2Q9HAB3 445 aa21.44■■□□□ 1.02
ERBB2-212ENST00000582788 HEG1Q9ULI3 1381 aa21.44■■□□□ 1.02
ERBB2-212ENST00000582788 DDIT3P35638 169 aa21.43■■□□□ 1.02
ERBB2-212ENST00000582788 SLC4A10Q6U841 1118 aa21.43■■□□□ 1.02
ERBB2-212ENST00000582788 PARP4Q9UKK3 1724 aaKnown RBP21.43■■□□□ 1.02
ERBB2-212ENST00000582788 FSD2A1L4K1 749 aa21.43■■□□□ 1.02
ERBB2-212ENST00000582788 PHAXQ9H814 394 aaKnown RBP21.43■■□□□ 1.02
ERBB2-212ENST00000582788 STRN4Q9NRL3 753 aa21.43■■□□□ 1.02
ERBB2-212ENST00000582788 LARP1Q6PKG0 1096 aaKnown RBP21.42■■□□□ 1.02
ERBB2-212ENST00000582788 GCC1Q96CN9 775 aa21.42■■□□□ 1.02
ERBB2-212ENST00000582788 GIGYF1O75420 1035 aaPredicted RBP21.41■■□□□ 1.02
ERBB2-212ENST00000582788 CCT4P50991 539 aaKnown RBP21.41■■□□□ 1.02
ERBB2-212ENST00000582788 DCAF5Q96JK2 942 aa21.41■■□□□ 1.02
ERBB2-212ENST00000582788 MEIS3Q99687 375 aa21.41■■□□□ 1.02
ERBB2-212ENST00000582788 CARD10Q9BWT7 1032 aa21.41■■□□□ 1.02
ERBB2-212ENST00000582788 NFATC2IPQ8NCF5 419 aa21.41■■□□□ 1.02
ERBB2-212ENST00000582788 CHPF2Q9P2E5 772 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms