RNA–Protein interactions for RNA: ENST00000581963.1

CDK12-207, Transcript of cyclin dependent kinase 12, humanhuman

TSL 3

Gene CDK12, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-207ENST00000581963 TMF1P82094 1093 aa8.59□□□□□ -1.03
CDK12-207ENST00000581963 ITPK1Q13572 414 aa8.59□□□□□ -1.03
CDK12-207ENST00000581963 KDRP35968 1356 aa8.59□□□□□ -1.03
CDK12-207ENST00000581963 TJP1Q07157 1748 aa8.58□□□□□ -1.04
CDK12-207ENST00000581963 C10orf71Q711Q0 1435 aa8.58□□□□□ -1.04
CDK12-207ENST00000581963 GNPATO15228 680 aa8.58□□□□□ -1.04
CDK12-207ENST00000581963 CARD14Q9BXL6 1004 aa8.58□□□□□ -1.04
CDK12-207ENST00000581963 ASAP1Q9ULH1 1129 aa8.58□□□□□ -1.04
CDK12-207ENST00000581963 CCDC88AQ3V6T2 1871 aa8.57□□□□□ -1.04
CDK12-207ENST00000581963 ADAMTS7Q9UKP4 1686 aa8.57□□□□□ -1.04
CDK12-207ENST00000581963 PCNTO95613 3336 aa8.57□□□□□ -1.04
CDK12-207ENST00000581963 MMP10P09238 476 aa8.57□□□□□ -1.04
CDK12-207ENST00000581963 POTEDQ86YR6 584 aa8.57□□□□□ -1.04
CDK12-207ENST00000581963 EYA1Q99502 592 aa8.57□□□□□ -1.04
CDK12-207ENST00000581963 TMOD3Q9NYL9 352 aa8.57□□□□□ -1.04
CDK12-207ENST00000581963 SPG7Q9UQ90 795 aa8.57□□□□□ -1.04
CDK12-207ENST00000581963 SCN11AQ9UI33 1791 aa8.57□□□□□ -1.04
CDK12-207ENST00000581963 AFDNP55196 1824 aaKnown RBP8.57□□□□□ -1.04
CDK12-207ENST00000581963 WASHC2AQ641Q2 1341 aa8.56□□□□□ -1.04
CDK12-207ENST00000581963 TNRC6CQ9HCJ0 1690 aaKnown RBP8.56□□□□□ -1.04
CDK12-207ENST00000581963 PHKG2P15735 406 aa8.56□□□□□ -1.04
CDK12-207ENST00000581963 ATP6V1AP38606 617 aa8.56□□□□□ -1.04
CDK12-207ENST00000581963 SLC4A9Q96Q91 983 aa8.56□□□□□ -1.04
CDK12-207ENST00000581963 ATG3Q9NT62 314 aa8.56□□□□□ -1.04
CDK12-207ENST00000581963 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.56□□□□□ -1.04
CDK12-207ENST00000581963 DLEC1Q9Y238 1755 aa8.56□□□□□ -1.04
CDK12-207ENST00000581963 PPM1GO15355 546 aaPredicted RBP8.55□□□□□ -1.04
CDK12-207ENST00000581963 IFNL2Q8IZJ0 200 aa8.55□□□□□ -1.04
CDK12-207ENST00000581963 PLEKHG2Q9H7P9 1386 aa8.55□□□□□ -1.04
CDK12-207ENST00000581963 A0A0G2JLW4 131 aa8.54□□□□□ -1.04
CDK12-207ENST00000581963 APLP1P51693 650 aa8.54□□□□□ -1.04
CDK12-207ENST00000581963 TGFB2P61812 414 aa8.54□□□□□ -1.04
CDK12-207ENST00000581963 DNAJC5GQ8N7S2 189 aa8.54□□□□□ -1.04
CDK12-207ENST00000581963 NMRK2Q9NPI5 230 aa8.54□□□□□ -1.04
CDK12-207ENST00000581963 POLKQ9UBT6 870 aa8.54□□□□□ -1.04
CDK12-207ENST00000581963 BCS1LQ9Y276 419 aa8.54□□□□□ -1.04
CDK12-207ENST00000581963 KDM6AO15550 1401 aaPredicted RBP8.54□□□□□ -1.04
CDK12-207ENST00000581963 TOMM70O94826 608 aa8.53□□□□□ -1.04
CDK12-207ENST00000581963 GYS1P13807 737 aa8.53□□□□□ -1.04
CDK12-207ENST00000581963 DPEP1P16444 411 aa8.53□□□□□ -1.04
CDK12-207ENST00000581963 EIF4A2Q14240 407 aaKnown RBP8.53□□□□□ -1.04
CDK12-207ENST00000581963 CDCA8Q53HL2 280 aa8.53□□□□□ -1.04
CDK12-207ENST00000581963 ARHGEF1Q92888 912 aaKnown RBP8.53□□□□□ -1.04
CDK12-207ENST00000581963 RTCBQ9Y3I0 505 aaKnown RBP8.53□□□□□ -1.04
CDK12-207ENST00000581963 TIAM2Q8IVF5 1701 aa8.53□□□□□ -1.04
CDK12-207ENST00000581963 CNTNAP4Q9C0A0 1308 aa8.53□□□□□ -1.04
CDK12-207ENST00000581963 NRXN2Q9P2S2 1712 aa8.52□□□□□ -1.05
CDK12-207ENST00000581963 TRAPPC3LQ5T215 181 aa8.52□□□□□ -1.05
CDK12-207ENST00000581963 RC3H1Q5TC82 1133 aaKnown RBP8.52□□□□□ -1.05
CDK12-207ENST00000581963 NLGN1Q8N2Q7 840 aa8.52□□□□□ -1.05
CDK12-207ENST00000581963 KCPQ6ZWJ8 1503 aa8.52□□□□□ -1.05
CDK12-207ENST00000581963 DICER1Q9UPY3 1922 aaKnown RBP8.51□□□□□ -1.05
CDK12-207ENST00000581963 ERVV-2B6SEH9 535 aa8.51□□□□□ -1.05
CDK12-207ENST00000581963 FCHSD2O94868 740 aa8.51□□□□□ -1.05
CDK12-207ENST00000581963 KCNA3P22001 575 aa8.51□□□□□ -1.05
CDK12-207ENST00000581963 ARHGAP27Q6ZUM4 889 aa8.51□□□□□ -1.05
CDK12-207ENST00000581963 RBM42Q9BTD8 480 aaKnown RBP8.51□□□□□ -1.05
CDK12-207ENST00000581963 CCDC87Q9NVE4 849 aa8.51□□□□□ -1.05
CDK12-207ENST00000581963 RPS6KA4O75676 772 aa8.5□□□□□ -1.05
CDK12-207ENST00000581963 CACNA1SQ13698 1873 aa8.5□□□□□ -1.05
CDK12-207ENST00000581963 C9orf131Q5VYM1 1079 aa8.5□□□□□ -1.05
CDK12-207ENST00000581963 RBM46Q8TBY0 533 aaKnown RBP8.5□□□□□ -1.05
CDK12-207ENST00000581963 DCAF5Q96JK2 942 aa8.5□□□□□ -1.05
CDK12-207ENST00000581963 PARP3Q9Y6F1 533 aa8.5□□□□□ -1.05
CDK12-207ENST00000581963 UBR2Q8IWV8 1755 aa8.5□□□□□ -1.05
CDK12-207ENST00000581963 ANKRD31Q8N7Z5 1873 aa8.49□□□□□ -1.05
CDK12-207ENST00000581963 RFC4P35249 363 aa8.49□□□□□ -1.05
CDK12-207ENST00000581963 TNNT2P45379 298 aaPredicted RBP8.49□□□□□ -1.05
CDK12-207ENST00000581963 HTRA3P83110 453 aa8.49□□□□□ -1.05
CDK12-207ENST00000581963 DDR1Q08345 913 aa8.49□□□□□ -1.05
CDK12-207ENST00000581963 ZNF530Q6P9A1 599 aaPredicted RBP8.49□□□□□ -1.05
CDK12-207ENST00000581963 SRP68Q9UHB9 627 aaKnown RBP8.49□□□□□ -1.05
CDK12-207ENST00000581963 HSP90AB1P08238 724 aaKnown RBP8.48□□□□□ -1.05
CDK12-207ENST00000581963 CRKLP46109 303 aaKnown RBP8.48□□□□□ -1.05
CDK12-207ENST00000581963 FKBP8Q14318 412 aa8.48□□□□□ -1.05
CDK12-207ENST00000581963 AEBP1Q8IUX7 1158 aa8.48□□□□□ -1.05
CDK12-207ENST00000581963 PIM2Q9P1W9 311 aa8.48□□□□□ -1.05
CDK12-207ENST00000581963 COL11A2P13942 1736 aaPredicted RBP8.48□□□□□ -1.05
CDK12-207ENST00000581963 USP42Q9H9J4 1324 aaKnown RBP8.48□□□□□ -1.05
CDK12-207ENST00000581963 FER1L6Q2WGJ9 1857 aa8.47□□□□□ -1.05
CDK12-207ENST00000581963 MRC1P22897 1456 aa8.47□□□□□ -1.05
CDK12-207ENST00000581963 PTCD1O75127 700 aaKnown RBP8.47□□□□□ -1.05
CDK12-207ENST00000581963 CHRNA5P30532 468 aa8.47□□□□□ -1.05
CDK12-207ENST00000581963 CABP4P57796 275 aa8.47□□□□□ -1.05
CDK12-207ENST00000581963 PLEKHO1Q53GL0 409 aaPredicted RBP8.47□□□□□ -1.05
CDK12-207ENST00000581963 DALRD3Q5D0E6 543 aaKnown RBP8.47□□□□□ -1.05
CDK12-207ENST00000581963 JMYQ8N9B5 988 aa8.47□□□□□ -1.05
CDK12-207ENST00000581963 KLRG1Q96E93 195 aa8.47□□□□□ -1.05
CDK12-207ENST00000581963 RNF181Q9P0P0 153 aa8.47□□□□□ -1.05
CDK12-207ENST00000581963 SIPA1L3O60292 1781 aaPredicted RBP8.46□□□□□ -1.05
CDK12-207ENST00000581963 POLRMTO00411 1230 aaKnown RBP8.46□□□□□ -1.06
CDK12-207ENST00000581963 FSTL1Q12841 308 aa8.46□□□□□ -1.06
CDK12-207ENST00000581963 AMOTQ4VCS5 1084 aa8.46□□□□□ -1.06
CDK12-207ENST00000581963 COL13A1Q5TAT6 717 aaPredicted RBP8.46□□□□□ -1.06
CDK12-207ENST00000581963 NFATC2IPQ8NCF5 419 aa8.46□□□□□ -1.06
CDK12-207ENST00000581963 KDM2BQ8NHM5 1336 aa8.46□□□□□ -1.06
CDK12-207ENST00000581963 SCN7AQ01118 1682 aa8.46□□□□□ -1.06
CDK12-207ENST00000581963 ARFGEF2Q9Y6D5 1785 aa8.45□□□□□ -1.06
CDK12-207ENST00000581963 TM4SF1P30408 202 aa8.45□□□□□ -1.06
CDK12-207ENST00000581963 MTHFSP49914 203 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms