RNA–Protein interactions for RNA: ENST00000580934.1

SPECC1-214, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 4

Gene SPECC1, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-214ENST00000580934 MPRIPQ6WCQ1 1025 aa19.53■□□□□ 0.72
SPECC1-214ENST00000580934 AMIGO3Q86WK7 504 aa19.53■□□□□ 0.72
SPECC1-214ENST00000580934 ITGB4P16144 1822 aa19.53■□□□□ 0.72
SPECC1-214ENST00000580934 ATP10DQ9P241 1426 aa19.52■□□□□ 0.72
SPECC1-214ENST00000580934 NKX1-1Q15270 411 aaPredicted RBP19.51■□□□□ 0.71
SPECC1-214ENST00000580934 SMARCC1Q92922 1105 aaPredicted RBP19.51■□□□□ 0.71
SPECC1-214ENST00000580934 ADCY9O60503 1353 aa19.51■□□□□ 0.71
SPECC1-214ENST00000580934 UBR3Q6ZT12 1888 aa19.5■□□□□ 0.71
SPECC1-214ENST00000580934 DIAPH1O60610 1272 aaKnown RBP19.5■□□□□ 0.71
SPECC1-214ENST00000580934 PNISRQ8TF01 805 aaKnown RBP19.5■□□□□ 0.71
SPECC1-214ENST00000580934 PIGBQ92521 554 aa19.49■□□□□ 0.71
SPECC1-214ENST00000580934 IL13P35225 146 aa19.48■□□□□ 0.71
SPECC1-214ENST00000580934 EIF4A2Q14240 407 aaKnown RBP19.48■□□□□ 0.71
SPECC1-214ENST00000580934 AK7Q96M32 723 aa19.48■□□□□ 0.71
SPECC1-214ENST00000580934 NUDCQ9Y266 331 aa19.48■□□□□ 0.71
SPECC1-214ENST00000580934 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.46■□□□□ 0.71
SPECC1-214ENST00000580934 WDR43Q15061 677 aaKnown RBP eCLIP19.46■□□□□ 0.71
SPECC1-214ENST00000580934 SSFA2P28290 1259 aa19.45■□□□□ 0.7
SPECC1-214ENST00000580934 SMIM5Q71RC9 77 aa19.45■□□□□ 0.7
SPECC1-214ENST00000580934 LOC102724428A0A0B4J2F2 783 aa19.44■□□□□ 0.7
SPECC1-214ENST00000580934 SIK1P57059 783 aa19.44■□□□□ 0.7
SPECC1-214ENST00000580934 LINC00116Q8NCU8 138 aa19.44■□□□□ 0.7
SPECC1-214ENST00000580934 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.44■□□□□ 0.7
SPECC1-214ENST00000580934 IGSF1Q8N6C5 1336 aa19.44■□□□□ 0.7
SPECC1-214ENST00000580934 PHF14O94880 888 aa19.43■□□□□ 0.7
SPECC1-214ENST00000580934 FAM9BQ8IZU0 186 aa19.43■□□□□ 0.7
SPECC1-214ENST00000580934 GPBP1L1Q9HC44 474 aaPredicted RBP19.43■□□□□ 0.7
SPECC1-214ENST00000580934 SPG7Q9UQ90 795 aa19.43■□□□□ 0.7
SPECC1-214ENST00000580934 IFFO2Q5TF58 517 aa19.42■□□□□ 0.7
SPECC1-214ENST00000580934 EYA1Q99502 592 aa19.42■□□□□ 0.7
SPECC1-214ENST00000580934 U2SURPO15042 1029 aaKnown RBP19.41■□□□□ 0.7
SPECC1-214ENST00000580934 ITPK1Q13572 414 aa19.41■□□□□ 0.7
SPECC1-214ENST00000580934 U2AF1L5P0DN76 240 aaPredicted RBP19.4■□□□□ 0.7
SPECC1-214ENST00000580934 U2AF1Q01081 240 aaKnown RBP eCLIP19.4■□□□□ 0.7
SPECC1-214ENST00000580934 ASAP1Q9ULH1 1129 aa19.4■□□□□ 0.7
SPECC1-214ENST00000580934 ADAMTS8Q9UP79 889 aa19.4■□□□□ 0.7
SPECC1-214ENST00000580934 KDRP35968 1356 aa19.4■□□□□ 0.7
SPECC1-214ENST00000580934 CICQ96RK0 1608 aaPredicted RBP19.4■□□□□ 0.7
SPECC1-214ENST00000580934 PHKG2P15735 406 aa19.39■□□□□ 0.69
SPECC1-214ENST00000580934 TMOD3Q9NYL9 352 aa19.39■□□□□ 0.69
SPECC1-214ENST00000580934 IFNL2Q8IZJ0 200 aa19.38■□□□□ 0.69
SPECC1-214ENST00000580934 PLEKHG2Q9H7P9 1386 aa19.38■□□□□ 0.69
SPECC1-214ENST00000580934 GNPATO15228 680 aa19.37■□□□□ 0.69
SPECC1-214ENST00000580934 HSPA6P17066 643 aa19.37■□□□□ 0.69
SPECC1-214ENST00000580934 ZNF526Q8TF50 670 aaPredicted RBP19.37■□□□□ 0.69
SPECC1-214ENST00000580934 ATG3Q9NT62 314 aa19.37■□□□□ 0.69
SPECC1-214ENST00000580934 KIF13BQ9NQT8 1826 aa19.37■□□□□ 0.69
SPECC1-214ENST00000580934 KIAA1551Q9HCM1 1747 aa19.37■□□□□ 0.69
SPECC1-214ENST00000580934 DLG5Q8TDM6 1919 aa19.36■□□□□ 0.69
SPECC1-214ENST00000580934 ATP6V1AP38606 617 aa19.36■□□□□ 0.69
SPECC1-214ENST00000580934 RSPH6AQ9H0K4 717 aa19.36■□□□□ 0.69
SPECC1-214ENST00000580934 WWC3Q9ULE0 1092 aa19.36■□□□□ 0.69
SPECC1-214ENST00000580934 FCHSD2O94868 740 aa19.35■□□□□ 0.69
SPECC1-214ENST00000580934 PNNQ9H307 717 aaKnown RBP19.35■□□□□ 0.69
SPECC1-214ENST00000580934 ZNF831Q5JPB2 1677 aa19.35■□□□□ 0.69
SPECC1-214ENST00000580934 PXDNLA1KZ92 1463 aa19.35■□□□□ 0.69
SPECC1-214ENST00000580934 KIF3CO14782 793 aa19.34■□□□□ 0.69
SPECC1-214ENST00000580934 MMP10P09238 476 aa19.34■□□□□ 0.69
SPECC1-214ENST00000580934 HMOX1P09601 288 aa19.34■□□□□ 0.69
SPECC1-214ENST00000580934 SULT6B1Q6IMI4 303 aa19.34■□□□□ 0.69
SPECC1-214ENST00000580934 AEBP1Q8IUX7 1158 aa19.33■□□□□ 0.68
SPECC1-214ENST00000580934 SLC4A9Q96Q91 983 aa19.33■□□□□ 0.68
SPECC1-214ENST00000580934 RUNDC1Q96C34 613 aa19.32■□□□□ 0.68
SPECC1-214ENST00000580934 PLEKHF1Q96S99 279 aa19.32■□□□□ 0.68
SPECC1-214ENST00000580934 PRKAR2BP31323 418 aa19.31■□□□□ 0.68
SPECC1-214ENST00000580934 TGFB2P61812 414 aa19.31■□□□□ 0.68
SPECC1-214ENST00000580934 C10orf71Q711Q0 1435 aa19.31■□□□□ 0.68
SPECC1-214ENST00000580934 VIRMAQ69YN4 1812 aaKnown RBP19.3■□□□□ 0.68
SPECC1-214ENST00000580934 ERVV-2B6SEH9 535 aa19.3■□□□□ 0.68
SPECC1-214ENST00000580934 TRAPPC3LQ5T215 181 aa19.3■□□□□ 0.68
SPECC1-214ENST00000580934 RC3H1Q5TC82 1133 aaKnown RBP19.3■□□□□ 0.68
SPECC1-214ENST00000580934 CCDC146Q8IYE0 955 aa19.3■□□□□ 0.68
SPECC1-214ENST00000580934 RTCBQ9Y3I0 505 aaKnown RBP19.3■□□□□ 0.68
SPECC1-214ENST00000580934 COL5A3P25940 1745 aaPredicted RBP19.3■□□□□ 0.68
SPECC1-214ENST00000580934 ADRA2BP18089 450 aa19.29■□□□□ 0.68
SPECC1-214ENST00000580934 NLGN1Q8N2Q7 840 aa19.29■□□□□ 0.68
SPECC1-214ENST00000580934 N4BP2Q86UW6 1770 aaPredicted RBP19.29■□□□□ 0.68
SPECC1-214ENST00000580934 MAPK8IP3Q9UPT6 1336 aa19.28■□□□□ 0.68
SPECC1-214ENST00000580934 NEFMP07197 916 aa19.28■□□□□ 0.68
SPECC1-214ENST00000580934 CNTNAP4Q9C0A0 1308 aa19.27■□□□□ 0.68
SPECC1-214ENST00000580934 ARHGEF1Q92888 912 aaKnown RBP19.27■□□□□ 0.68
SPECC1-214ENST00000580934 DCAF5Q96JK2 942 aa19.27■□□□□ 0.68
SPECC1-214ENST00000580934 C4AP0C0L4 1744 aa19.27■□□□□ 0.68
SPECC1-214ENST00000580934 KDM6AO15550 1401 aaPredicted RBP19.26■□□□□ 0.67
SPECC1-214ENST00000580934 A0A0G2JLW4 131 aa19.26■□□□□ 0.67
SPECC1-214ENST00000580934 HSP90AB1P08238 724 aaKnown RBP19.26■□□□□ 0.67
SPECC1-214ENST00000580934 GYS1P13807 737 aa19.26■□□□□ 0.67
SPECC1-214ENST00000580934 BRCA1P38398 1863 aaKnown RBP19.26■□□□□ 0.67
SPECC1-214ENST00000580934 MYH14Q7Z406 1995 aaKnown RBP19.25■□□□□ 0.67
SPECC1-214ENST00000580934 RPS6KA4O75676 772 aa19.25■□□□□ 0.67
SPECC1-214ENST00000580934 BCS1LQ9Y276 419 aa19.25■□□□□ 0.67
SPECC1-214ENST00000580934 APAF1O14727 1248 aa19.24■□□□□ 0.67
SPECC1-214ENST00000580934 HNRNPUQ00839 825 aaKnown RBP eCLIP19.24■□□□□ 0.67
SPECC1-214ENST00000580934 RBM42Q9BTD8 480 aaKnown RBP19.24■□□□□ 0.67
SPECC1-214ENST00000580934 PCNTO95613 3336 aa19.24■□□□□ 0.67
SPECC1-214ENST00000580934 DPEP1P16444 411 aa19.23■□□□□ 0.67
SPECC1-214ENST00000580934 KCNA3P22001 575 aa19.23■□□□□ 0.67
SPECC1-214ENST00000580934 NCBP3Q53F19 620 aaKnown RBP19.23■□□□□ 0.67
SPECC1-214ENST00000580934 PLEKHO1Q53GL0 409 aaPredicted RBP19.23■□□□□ 0.67
SPECC1-214ENST00000580934 NGEFQ8N5V2 710 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms