RNA–Protein interactions for RNA: ENST00000580171.2

RN7SL336P-201, Transcript of RNA, 7SL, cytoplasmic 336, pseudogene, humanhuman

BASIC

Gene RN7SL336P, Length 297 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL336P-201ENST00000580171 ATP6V1AP38606 617 aa15.6■□□□□ 0.09
RN7SL336P-201ENST00000580171 LINC00116Q8NCU8 138 aa15.6■□□□□ 0.09
RN7SL336P-201ENST00000580171 KDM6AO15550 1401 aaPredicted RBP15.6■□□□□ 0.09
RN7SL336P-201ENST00000580171 GNPATO15228 680 aa15.59■□□□□ 0.09
RN7SL336P-201ENST00000580171 AMER1Q5JTC6 1135 aaPredicted RBP15.59■□□□□ 0.09
RN7SL336P-201ENST00000580171 ZNF784Q8NCA9 323 aaPredicted RBP15.59■□□□□ 0.09
RN7SL336P-201ENST00000580171 ATG3Q9NT62 314 aa15.59■□□□□ 0.09
RN7SL336P-201ENST00000580171 CD2APQ9Y5K6 639 aa15.59■□□□□ 0.09
RN7SL336P-201ENST00000580171 ZNF831Q5JPB2 1677 aa15.59■□□□□ 0.09
RN7SL336P-201ENST00000580171 CHD4Q14839 1912 aa15.58■□□□□ 0.09
RN7SL336P-201ENST00000580171 AEBP1Q8IUX7 1158 aa15.58■□□□□ 0.08
RN7SL336P-201ENST00000580171 GRIN3BO60391 1043 aa15.57■□□□□ 0.08
RN7SL336P-201ENST00000580171 CABP4P57796 275 aa15.57■□□□□ 0.08
RN7SL336P-201ENST00000580171 ITPK1Q13572 414 aa15.57■□□□□ 0.08
RN7SL336P-201ENST00000580171 SULT6B1Q6IMI4 303 aa15.57■□□□□ 0.08
RN7SL336P-201ENST00000580171 AMIGO3Q86WK7 504 aa15.57■□□□□ 0.08
RN7SL336P-201ENST00000580171 MTHFSP49914 203 aa15.56■□□□□ 0.08
RN7SL336P-201ENST00000580171 IL13P35225 146 aa15.55■□□□□ 0.08
RN7SL336P-201ENST00000580171 RBM42Q9BTD8 480 aaKnown RBP15.55■□□□□ 0.08
RN7SL336P-201ENST00000580171 CNTNAP4Q9C0A0 1308 aa15.54■□□□□ 0.08
RN7SL336P-201ENST00000580171 ADRA2BP18089 450 aa15.54■□□□□ 0.08
RN7SL336P-201ENST00000580171 RTCBQ9Y3I0 505 aaKnown RBP15.54■□□□□ 0.08
RN7SL336P-201ENST00000580171 COL5A3P25940 1745 aaPredicted RBP15.54■□□□□ 0.08
RN7SL336P-201ENST00000580171 NPC1L1Q9UHC9 1359 aa15.52■□□□□ 0.08
RN7SL336P-201ENST00000580171 YBX3P16989 372 aaKnown RBP eCLIP15.52■□□□□ 0.08
RN7SL336P-201ENST00000580171 MRC1P22897 1456 aa15.52■□□□□ 0.07
RN7SL336P-201ENST00000580171 CICQ96RK0 1608 aaPredicted RBP15.51■□□□□ 0.07
RN7SL336P-201ENST00000580171 AKAP4Q5JQC9 854 aa15.51■□□□□ 0.07
RN7SL336P-201ENST00000580171 CC2D1BQ5T0F9 858 aaKnown RBP15.51■□□□□ 0.07
RN7SL336P-201ENST00000580171 TRAPPC3LQ5T215 181 aa15.51■□□□□ 0.07
RN7SL336P-201ENST00000580171 RC3H1Q5TC82 1133 aaKnown RBP15.51■□□□□ 0.07
RN7SL336P-201ENST00000580171 SMIM5Q71RC9 77 aa15.51■□□□□ 0.07
RN7SL336P-201ENST00000580171 DIAPH1O60610 1272 aaKnown RBP15.5■□□□□ 0.07
RN7SL336P-201ENST00000580171 MMP10P09238 476 aa15.5■□□□□ 0.07
RN7SL336P-201ENST00000580171 SLC4A9Q96Q91 983 aa15.5■□□□□ 0.07
RN7SL336P-201ENST00000580171 SCN11AQ9UI33 1791 aa15.49■□□□□ 0.07
RN7SL336P-201ENST00000580171 PER1O15534 1290 aaPredicted RBP15.49■□□□□ 0.07
RN7SL336P-201ENST00000580171 PTCD1O75127 700 aaKnown RBP15.49■□□□□ 0.07
RN7SL336P-201ENST00000580171 NLGN1Q8N2Q7 840 aa15.49■□□□□ 0.07
RN7SL336P-201ENST00000580171 NFATC2IPQ8NCF5 419 aa15.49■□□□□ 0.07
RN7SL336P-201ENST00000580171 RPS6KA4O75676 772 aa15.48■□□□□ 0.07
RN7SL336P-201ENST00000580171 HMOX1P09601 288 aa15.48■□□□□ 0.07
RN7SL336P-201ENST00000580171 RFC4P35249 363 aa15.48■□□□□ 0.07
RN7SL336P-201ENST00000580171 COL3A1P02461 1466 aaPredicted RBP15.47■□□□□ 0.07
RN7SL336P-201ENST00000580171 C10orf71Q711Q0 1435 aa15.47■□□□□ 0.07
RN7SL336P-201ENST00000580171 SLC52A2Q9HAB3 445 aa15.47■□□□□ 0.07
RN7SL336P-201ENST00000580171 C4AP0C0L4 1744 aa15.46■□□□□ 0.07
RN7SL336P-201ENST00000580171 TJP1Q07157 1748 aa15.46■□□□□ 0.07
RN7SL336P-201ENST00000580171 GIGYF1O75420 1035 aaPredicted RBP15.46■□□□□ 0.07
RN7SL336P-201ENST00000580171 CRKLP46109 303 aaKnown RBP15.46■□□□□ 0.07
RN7SL336P-201ENST00000580171 ARHGEF1Q92888 912 aaKnown RBP15.46■□□□□ 0.07
RN7SL336P-201ENST00000580171 PXDNLA1KZ92 1463 aa15.46■□□□□ 0.06
RN7SL336P-201ENST00000580171 ADAMTS7Q9UKP4 1686 aa15.44■□□□□ 0.06
RN7SL336P-201ENST00000580171 GYS1P13807 737 aa15.44■□□□□ 0.06
RN7SL336P-201ENST00000580171 CCDC87Q9NVE4 849 aa15.44■□□□□ 0.06
RN7SL336P-201ENST00000580171 ATP10DQ9P241 1426 aa15.43■□□□□ 0.06
RN7SL336P-201ENST00000580171 U2SURPO15042 1029 aaKnown RBP15.43■□□□□ 0.06
RN7SL336P-201ENST00000580171 RNMTO43148 476 aaKnown RBP15.43■□□□□ 0.06
RN7SL336P-201ENST00000580171 CNGB1Q14028 1251 aaPredicted RBP15.43■□□□□ 0.06
RN7SL336P-201ENST00000580171 MTHFSDQ2M296 383 aaKnown RBP15.43■□□□□ 0.06
RN7SL336P-201ENST00000580171 WWC3Q9ULE0 1092 aa15.43■□□□□ 0.06
RN7SL336P-201ENST00000580171 PARP3Q9Y6F1 533 aa15.43■□□□□ 0.06
RN7SL336P-201ENST00000580171 KIF13BQ9NQT8 1826 aa15.43■□□□□ 0.06
RN7SL336P-201ENST00000580171 KCPQ6ZWJ8 1503 aa15.43■□□□□ 0.06
RN7SL336P-201ENST00000580171 USP42Q9H9J4 1324 aaKnown RBP15.43■□□□□ 0.06
RN7SL336P-201ENST00000580171 ADCY9O60503 1353 aa15.42■□□□□ 0.06
RN7SL336P-201ENST00000580171 C1QTNF8P60827 252 aa15.42■□□□□ 0.06
RN7SL336P-201ENST00000580171 TGFB2P61812 414 aa15.42■□□□□ 0.06
RN7SL336P-201ENST00000580171 GAS2L2Q8NHY3 880 aa15.42■□□□□ 0.06
RN7SL336P-201ENST00000580171 CFAP53Q96M91 514 aa15.42■□□□□ 0.06
RN7SL336P-201ENST00000580171 LGR6Q9HBX8 967 aa15.41■□□□□ 0.06
RN7SL336P-201ENST00000580171 MYH14Q7Z406 1995 aaKnown RBP15.41■□□□□ 0.06
RN7SL336P-201ENST00000580171 DNAJC10Q8IXB1 793 aa15.4■□□□□ 0.06
RN7SL336P-201ENST00000580171 TTC5Q8N0Z6 440 aa15.4■□□□□ 0.06
RN7SL336P-201ENST00000580171 KIAA1551Q9HCM1 1747 aa15.4■□□□□ 0.06
RN7SL336P-201ENST00000580171 SENP3-EIF4A1A0A087X0R7 540 aa15.39■□□□□ 0.05
RN7SL336P-201ENST00000580171 INTS5Q6P9B9 1019 aaKnown RBP15.39■□□□□ 0.05
RN7SL336P-201ENST00000580171 VSIG10Q8N0Z9 540 aa15.39■□□□□ 0.05
RN7SL336P-201ENST00000580171 SOS1Q07889 1333 aaPredicted RBP15.39■□□□□ 0.05
RN7SL336P-201ENST00000580171 COL15A1P39059 1388 aa15.38■□□□□ 0.05
RN7SL336P-201ENST00000580171 ZPR1O75312 459 aa15.38■□□□□ 0.05
RN7SL336P-201ENST00000580171 TEFQ10587 303 aa15.38■□□□□ 0.05
RN7SL336P-201ENST00000580171 SLC39A6Q13433 755 aa15.38■□□□□ 0.05
RN7SL336P-201ENST00000580171 GPBP1L1Q9HC44 474 aaPredicted RBP15.38■□□□□ 0.05
RN7SL336P-201ENST00000580171 SRP68Q9UHB9 627 aaKnown RBP15.38■□□□□ 0.05
RN7SL336P-201ENST00000580171 BCS1LQ9Y276 419 aa15.38■□□□□ 0.05
RN7SL336P-201ENST00000580171 UBR2Q8IWV8 1755 aa15.38■□□□□ 0.05
RN7SL336P-201ENST00000580171 VIRMAQ69YN4 1812 aaKnown RBP15.38■□□□□ 0.05
RN7SL336P-201ENST00000580171 GNAT3A8MTJ3 354 aa15.37■□□□□ 0.05
RN7SL336P-201ENST00000580171 CYP19A1P11511 503 aaPredicted RBP15.37■□□□□ 0.05
RN7SL336P-201ENST00000580171 FKBP8Q14318 412 aa15.37■□□□□ 0.05
RN7SL336P-201ENST00000580171 NUDCQ9Y266 331 aa15.37■□□□□ 0.05
RN7SL336P-201ENST00000580171 A0A0G2JLW4 131 aa15.36■□□□□ 0.05
RN7SL336P-201ENST00000580171 N4BP2Q86UW6 1770 aaPredicted RBP15.36■□□□□ 0.05
RN7SL336P-201ENST00000580171 STARD3NLO95772 234 aa15.35■□□□□ 0.05
RN7SL336P-201ENST00000580171 DPEP1P16444 411 aa15.35■□□□□ 0.05
RN7SL336P-201ENST00000580171 DDR1Q08345 913 aa15.35■□□□□ 0.05
RN7SL336P-201ENST00000580171 ZBTB1Q9Y2K1 713 aa15.35■□□□□ 0.05
RN7SL336P-201ENST00000580171 FCHSD2O94868 740 aa15.34■□□□□ 0.05
RN7SL336P-201ENST00000580171 PRKAR2BP31323 418 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms