RNA–Protein interactions for RNA: ENST00000580113.1

KRT16P3-202, Transcript of keratin 16 pseudogene 3, humanhuman

TSL 3 BASIC

Gene KRT16P3, Length 1,012 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT16P3-202ENST00000580113 BRCA1P38398 1863 aaKnown RBP18.46■□□□□ 0.54
KRT16P3-202ENST00000580113 TMOD3Q9NYL9 352 aa18.45■□□□□ 0.54
KRT16P3-202ENST00000580113 FCHSD2O94868 740 aa18.44■□□□□ 0.54
KRT16P3-202ENST00000580113 TGFB2P61812 414 aa18.44■□□□□ 0.54
KRT16P3-202ENST00000580113 C16orf71Q8IYS4 520 aaPredicted RBP18.44■□□□□ 0.54
KRT16P3-202ENST00000580113 C10orf71Q711Q0 1435 aa18.43■□□□□ 0.54
KRT16P3-202ENST00000580113 DPEP1P16444 411 aa18.43■□□□□ 0.54
KRT16P3-202ENST00000580113 NKX1-1Q15270 411 aaPredicted RBP18.43■□□□□ 0.54
KRT16P3-202ENST00000580113 RBM46Q8TBY0 533 aaKnown RBP18.43■□□□□ 0.54
KRT16P3-202ENST00000580113 KLRG1Q96E93 195 aa18.43■□□□□ 0.54
KRT16P3-202ENST00000580113 C4AP0C0L4 1744 aa18.43■□□□□ 0.54
KRT16P3-202ENST00000580113 C9orf131Q5VYM1 1079 aa18.42■□□□□ 0.54
KRT16P3-202ENST00000580113 SPG7Q9UQ90 795 aa18.42■□□□□ 0.54
KRT16P3-202ENST00000580113 EMILIN1Q9Y6C2 1016 aa18.42■□□□□ 0.54
KRT16P3-202ENST00000580113 ARFGEF1Q9Y6D6 1849 aa18.42■□□□□ 0.54
KRT16P3-202ENST00000580113 TMF1P82094 1093 aa18.41■□□□□ 0.54
KRT16P3-202ENST00000580113 KCPQ6ZWJ8 1503 aa18.4■□□□□ 0.54
KRT16P3-202ENST00000580113 PPM1GO15355 546 aaPredicted RBP18.4■□□□□ 0.54
KRT16P3-202ENST00000580113 TRAPPC3LQ5T215 181 aa18.4■□□□□ 0.54
KRT16P3-202ENST00000580113 CCDC87Q9NVE4 849 aa18.4■□□□□ 0.54
KRT16P3-202ENST00000580113 RTCBQ9Y3I0 505 aaKnown RBP18.4■□□□□ 0.54
KRT16P3-202ENST00000580113 TONSLQ96HA7 1378 aa18.4■□□□□ 0.54
KRT16P3-202ENST00000580113 TNS4Q8IZW8 715 aa18.39■□□□□ 0.53
KRT16P3-202ENST00000580113 NLGN1Q8N2Q7 840 aa18.39■□□□□ 0.53
KRT16P3-202ENST00000580113 JMYQ8N9B5 988 aa18.39■□□□□ 0.53
KRT16P3-202ENST00000580113 ATG3Q9NT62 314 aa18.39■□□□□ 0.53
KRT16P3-202ENST00000580113 KIF24Q5T7B8 1368 aa18.39■□□□□ 0.53
KRT16P3-202ENST00000580113 COL5A3P25940 1745 aaPredicted RBP18.37■□□□□ 0.53
KRT16P3-202ENST00000580113 ARHGEF1Q92888 912 aaKnown RBP18.37■□□□□ 0.53
KRT16P3-202ENST00000580113 PARP3Q9Y6F1 533 aa18.37■□□□□ 0.53
KRT16P3-202ENST00000580113 PLEKHG2Q9H7P9 1386 aa18.37■□□□□ 0.53
KRT16P3-202ENST00000580113 NCAPD2Q15021 1401 aa18.37■□□□□ 0.53
KRT16P3-202ENST00000580113 GYS1P13807 737 aa18.36■□□□□ 0.53
KRT16P3-202ENST00000580113 PHKG2P15735 406 aa18.36■□□□□ 0.53
KRT16P3-202ENST00000580113 FSTL1Q12841 308 aa18.36■□□□□ 0.53
KRT16P3-202ENST00000580113 RBM42Q9BTD8 480 aaKnown RBP18.36■□□□□ 0.53
KRT16P3-202ENST00000580113 RRAGCQ9HB90 399 aa18.36■□□□□ 0.53
KRT16P3-202ENST00000580113 TNRC6CQ9HCJ0 1690 aaKnown RBP18.36■□□□□ 0.53
KRT16P3-202ENST00000580113 RNF181Q9P0P0 153 aa18.36■□□□□ 0.53
KRT16P3-202ENST00000580113 ANKRD26Q9UPS8 1709 aa18.35■□□□□ 0.53
KRT16P3-202ENST00000580113 KDRP35968 1356 aa18.35■□□□□ 0.53
KRT16P3-202ENST00000580113 KDM2BQ8NHM5 1336 aa18.35■□□□□ 0.53
KRT16P3-202ENST00000580113 KCNA3P22001 575 aa18.35■□□□□ 0.53
KRT16P3-202ENST00000580113 RFC4P35249 363 aa18.35■□□□□ 0.53
KRT16P3-202ENST00000580113 IFNL2Q8IZJ0 200 aa18.35■□□□□ 0.53
KRT16P3-202ENST00000580113 SLC4A9Q96Q91 983 aa18.35■□□□□ 0.53
KRT16P3-202ENST00000580113 EYA1Q99502 592 aa18.35■□□□□ 0.53
KRT16P3-202ENST00000580113 SLC24A1O60721 1099 aa18.34■□□□□ 0.53
KRT16P3-202ENST00000580113 SBF1O95248 1867 aa18.34■□□□□ 0.53
KRT16P3-202ENST00000580113 PIM2Q9P1W9 311 aa18.33■□□□□ 0.52
KRT16P3-202ENST00000580113 ZNF831Q5JPB2 1677 aa18.33■□□□□ 0.52
KRT16P3-202ENST00000580113 MYH14Q7Z406 1995 aaKnown RBP18.33■□□□□ 0.52
KRT16P3-202ENST00000580113 PRELPP51888 382 aa18.32■□□□□ 0.52
KRT16P3-202ENST00000580113 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.32■□□□□ 0.52
KRT16P3-202ENST00000580113 ADRA2BP18089 450 aa18.31■□□□□ 0.52
KRT16P3-202ENST00000580113 DALRD3Q5D0E6 543 aaKnown RBP18.31■□□□□ 0.52
KRT16P3-202ENST00000580113 DCAF5Q96JK2 942 aa18.31■□□□□ 0.52
KRT16P3-202ENST00000580113 RPS6KA4O75676 772 aa18.3■□□□□ 0.52
KRT16P3-202ENST00000580113 CHRNA5P30532 468 aa18.3■□□□□ 0.52
KRT16P3-202ENST00000580113 RC3H1Q5TC82 1133 aaKnown RBP18.3■□□□□ 0.52
KRT16P3-202ENST00000580113 CARD14Q9BXL6 1004 aa18.3■□□□□ 0.52
KRT16P3-202ENST00000580113 WASHC2AQ641Q2 1341 aa18.29■□□□□ 0.52
KRT16P3-202ENST00000580113 CNTNAP4Q9C0A0 1308 aa18.29■□□□□ 0.52
KRT16P3-202ENST00000580113 SMC1BQ8NDV3 1235 aa18.29■□□□□ 0.52
KRT16P3-202ENST00000580113 SRP68Q9UHB9 627 aaKnown RBP18.29■□□□□ 0.52
KRT16P3-202ENST00000580113 DDR1Q08345 913 aa18.27■□□□□ 0.52
KRT16P3-202ENST00000580113 FKBP8Q14318 412 aa18.27■□□□□ 0.52
KRT16P3-202ENST00000580113 HSPA1AP0DMV8 641 aaKnown RBP18.26■□□□□ 0.51
KRT16P3-202ENST00000580113 HSPA1BP0DMV9 641 aaKnown RBP18.26■□□□□ 0.51
KRT16P3-202ENST00000580113 RASSF7Q02833 373 aa18.26■□□□□ 0.51
KRT16P3-202ENST00000580113 ERVV-2B6SEH9 535 aa18.25■□□□□ 0.51
KRT16P3-202ENST00000580113 PTCD1O75127 700 aaKnown RBP18.25■□□□□ 0.51
KRT16P3-202ENST00000580113 CCDC88AQ3V6T2 1871 aa18.24■□□□□ 0.51
KRT16P3-202ENST00000580113 CRKLP46109 303 aaKnown RBP18.24■□□□□ 0.51
KRT16P3-202ENST00000580113 CABP4P57796 275 aa18.24■□□□□ 0.51
KRT16P3-202ENST00000580113 EIF4A2Q14240 407 aaKnown RBP18.24■□□□□ 0.51
KRT16P3-202ENST00000580113 POLKQ9UBT6 870 aa18.24■□□□□ 0.51
KRT16P3-202ENST00000580113 USP42Q9H9J4 1324 aaKnown RBP18.23■□□□□ 0.51
KRT16P3-202ENST00000580113 TJP1Q07157 1748 aa18.23■□□□□ 0.51
KRT16P3-202ENST00000580113 TIAM2Q8IVF5 1701 aa18.23■□□□□ 0.51
KRT16P3-202ENST00000580113 KDM6AO15550 1401 aaPredicted RBP18.23■□□□□ 0.51
KRT16P3-202ENST00000580113 PCNTO95613 3336 aa18.23■□□□□ 0.51
KRT16P3-202ENST00000580113 TNNT2P45379 298 aaPredicted RBP18.22■□□□□ 0.51
KRT16P3-202ENST00000580113 CDCA8Q53HL2 280 aa18.22■□□□□ 0.51
KRT16P3-202ENST00000580113 AFDNP55196 1824 aaKnown RBP18.21■□□□□ 0.51
KRT16P3-202ENST00000580113 HSP90AB1P08238 724 aaKnown RBP18.21■□□□□ 0.51
KRT16P3-202ENST00000580113 ADAMTS7Q9UKP4 1686 aa18.2■□□□□ 0.5
KRT16P3-202ENST00000580113 POLRMTO00411 1230 aaKnown RBP18.2■□□□□ 0.5
KRT16P3-202ENST00000580113 ZNF530Q6P9A1 599 aaPredicted RBP18.2■□□□□ 0.5
KRT16P3-202ENST00000580113 VEGFAP15692 232 aaPredicted RBP18.19■□□□□ 0.5
KRT16P3-202ENST00000580113 DLEC1Q9Y238 1755 aa18.18■□□□□ 0.5
KRT16P3-202ENST00000580113 GLTPD2A6NH11 291 aa18.18■□□□□ 0.5
KRT16P3-202ENST00000580113 LMNB1P20700 586 aa18.18■□□□□ 0.5
KRT16P3-202ENST00000580113 PLEKHO1Q53GL0 409 aaPredicted RBP18.18■□□□□ 0.5
KRT16P3-202ENST00000580113 TM4SF1P30408 202 aa18.17■□□□□ 0.5
KRT16P3-202ENST00000580113 MTHFSP49914 203 aa18.17■□□□□ 0.5
KRT16P3-202ENST00000580113 USPL1Q5W0Q7 1092 aa18.17■□□□□ 0.5
KRT16P3-202ENST00000580113 NFATC2IPQ8NCF5 419 aa18.17■□□□□ 0.5
KRT16P3-202ENST00000580113 ZC3H4Q9UPT8 1303 aaKnown RBP18.17■□□□□ 0.5
KRT16P3-202ENST00000580113 ZPR1O75312 459 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms