RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 SPDYE16A6NNV3 312 aaPredicted RBP10.65□□□□□ -0.7
COPS3-215ENST00000578317 FCHSD2O94868 740 aa10.65□□□□□ -0.7
COPS3-215ENST00000578317 FAM9BQ8IZU0 186 aa10.65□□□□□ -0.7
COPS3-215ENST00000578317 ARXQ96QS3 562 aa10.65□□□□□ -0.7
COPS3-215ENST00000578317 PRDM11Q9NQV5 511 aa10.65□□□□□ -0.7
COPS3-215ENST00000578317 SHPRHQ149N8 1683 aa10.64□□□□□ -0.71
COPS3-215ENST00000578317 MARF1Q9Y4F3 1742 aaKnown RBP10.64□□□□□ -0.71
COPS3-215ENST00000578317 PNNQ9H307 717 aaKnown RBP10.64□□□□□ -0.71
COPS3-215ENST00000578317 COL22A1Q8NFW1 1626 aaPredicted RBP10.63□□□□□ -0.71
COPS3-215ENST00000578317 U2AF1L5P0DN76 240 aaPredicted RBP10.63□□□□□ -0.71
COPS3-215ENST00000578317 U2AF1Q01081 240 aaKnown RBP eCLIP10.63□□□□□ -0.71
COPS3-215ENST00000578317 PDIA6Q15084 440 aa10.63□□□□□ -0.71
COPS3-215ENST00000578317 KRI1Q8N9T8 703 aaKnown RBP10.63□□□□□ -0.71
COPS3-215ENST00000578317 DAXXQ9UER7 740 aaPredicted RBP10.63□□□□□ -0.71
COPS3-215ENST00000578317 ABCC6O95255 1503 aa10.63□□□□□ -0.71
COPS3-215ENST00000578317 U2SURPO15042 1029 aaKnown RBP10.62□□□□□ -0.71
COPS3-215ENST00000578317 CHRNA2Q15822 529 aa10.62□□□□□ -0.71
COPS3-215ENST00000578317 ANKRD24Q8TF21 1146 aa10.62□□□□□ -0.71
COPS3-215ENST00000578317 EYA1Q99502 592 aa10.62□□□□□ -0.71
COPS3-215ENST00000578317 ERBB3P21860 1342 aa10.62□□□□□ -0.71
COPS3-215ENST00000578317 PHRF1Q9P1Y6 1649 aaKnown RBP10.62□□□□□ -0.71
COPS3-215ENST00000578317 OXER1Q8TDS5 423 aa10.62□□□□□ -0.71
COPS3-215ENST00000578317 IGSF1Q8N6C5 1336 aa10.62□□□□□ -0.71
COPS3-215ENST00000578317 CRYBG1Q9Y4K1 1723 aa10.61□□□□□ -0.71
COPS3-215ENST00000578317 ZBTB7CA1YPR0 619 aa10.61□□□□□ -0.71
COPS3-215ENST00000578317 PLEKHF1Q96S99 279 aa10.61□□□□□ -0.71
COPS3-215ENST00000578317 RSPH6AQ9H0K4 717 aa10.61□□□□□ -0.71
COPS3-215ENST00000578317 KDRP35968 1356 aa10.61□□□□□ -0.71
COPS3-215ENST00000578317 LRP6O75581 1613 aa10.61□□□□□ -0.71
COPS3-215ENST00000578317 ABCA3Q99758 1704 aa10.61□□□□□ -0.71
COPS3-215ENST00000578317 ADAMTS2O95450 1211 aa10.6□□□□□ -0.71
COPS3-215ENST00000578317 NBPF6Q5VWK0 638 aa10.6□□□□□ -0.71
COPS3-215ENST00000578317 FNBP4Q8N3X1 1017 aaPredicted RBP10.6□□□□□ -0.71
COPS3-215ENST00000578317 NGEFQ8N5V2 710 aa10.6□□□□□ -0.71
COPS3-215ENST00000578317 UPF1Q92900 1129 aaKnown RBP eCLIP10.6□□□□□ -0.71
COPS3-215ENST00000578317 NBPF4Q96M43 638 aa10.6□□□□□ -0.71
COPS3-215ENST00000578317 MAP2P11137 1827 aaKnown RBP10.6□□□□□ -0.71
COPS3-215ENST00000578317 WDR17Q8IZU2 1322 aa10.59□□□□□ -0.71
COPS3-215ENST00000578317 NUTM2BA6NNL0 878 aaPredicted RBP10.59□□□□□ -0.71
COPS3-215ENST00000578317 NUTM2EB1AL46 878 aaPredicted RBP10.59□□□□□ -0.71
COPS3-215ENST00000578317 SULT6B1Q6IMI4 303 aa10.59□□□□□ -0.71
COPS3-215ENST00000578317 NUTM2AQ8IVF1 878 aaPredicted RBP10.59□□□□□ -0.71
COPS3-215ENST00000578317 RUNDC1Q96C34 613 aa10.59□□□□□ -0.71
COPS3-215ENST00000578317 LTV1Q96GA3 475 aaPredicted RBP10.59□□□□□ -0.71
COPS3-215ENST00000578317 BTG4Q9NY30 223 aa10.59□□□□□ -0.71
COPS3-215ENST00000578317 PEAK1Q9H792 1746 aa10.59□□□□□ -0.71
COPS3-215ENST00000578317 EVA1CP58658 441 aa10.58□□□□□ -0.72
COPS3-215ENST00000578317 CARD10Q9BWT7 1032 aa10.58□□□□□ -0.72
COPS3-215ENST00000578317 NCAPD2Q15021 1401 aa10.58□□□□□ -0.72
COPS3-215ENST00000578317 CAMTA1Q9Y6Y1 1673 aa10.58□□□□□ -0.72
COPS3-215ENST00000578317 PLEKHG2Q9H7P9 1386 aa10.57□□□□□ -0.72
COPS3-215ENST00000578317 SLC34A2O95436 690 aa10.57□□□□□ -0.72
COPS3-215ENST00000578317 HMOX1P09601 288 aa10.57□□□□□ -0.72
COPS3-215ENST00000578317 CSB-PGBD3P0DP91 1061 aa10.57□□□□□ -0.72
COPS3-215ENST00000578317 AEBP1Q8IUX7 1158 aa10.57□□□□□ -0.72
COPS3-215ENST00000578317 PTCD2Q8WV60 388 aaKnown RBP10.57□□□□□ -0.72
COPS3-215ENST00000578317 NGLY1Q96IV0 654 aa10.57□□□□□ -0.72
COPS3-215ENST00000578317 GPBP1L1Q9HC44 474 aaPredicted RBP10.57□□□□□ -0.72
COPS3-215ENST00000578317 COL5A2P05997 1499 aaPredicted RBP10.57□□□□□ -0.72
COPS3-215ENST00000578317 COL18A1P39060 1754 aa10.56□□□□□ -0.72
COPS3-215ENST00000578317 NEFMP07197 916 aa10.56□□□□□ -0.72
COPS3-215ENST00000578317 PRKAR2BP31323 418 aa10.56□□□□□ -0.72
COPS3-215ENST00000578317 UNC5CLQ8IV45 518 aa10.56□□□□□ -0.72
COPS3-215ENST00000578317 TCP11L2Q8N4U5 519 aa10.56□□□□□ -0.72
COPS3-215ENST00000578317 NLRP2Q9NX02 1062 aa10.56□□□□□ -0.72
COPS3-215ENST00000578317 SLIT2O94813 1529 aa10.55□□□□□ -0.72
COPS3-215ENST00000578317 APAF1O14727 1248 aa10.55□□□□□ -0.72
COPS3-215ENST00000578317 LARP1Q6PKG0 1096 aaKnown RBP10.55□□□□□ -0.72
COPS3-215ENST00000578317 TOM1L2Q6ZVM7 507 aa10.55□□□□□ -0.72
COPS3-215ENST00000578317 PHACTR3Q96KR7 559 aa10.55□□□□□ -0.72
COPS3-215ENST00000578317 LMO7Q8WWI1 1683 aa10.55□□□□□ -0.72
COPS3-215ENST00000578317 MAP3K9P80192 1104 aa10.55□□□□□ -0.72
COPS3-215ENST00000578317 CCDC27Q2M243 656 aa10.55□□□□□ -0.72
COPS3-215ENST00000578317 AMOTQ4VCS5 1084 aa10.55□□□□□ -0.72
COPS3-215ENST00000578317 CCDC146Q8IYE0 955 aa10.55□□□□□ -0.72
COPS3-215ENST00000578317 C8orf37Q96NL8 207 aa10.55□□□□□ -0.72
COPS3-215ENST00000578317 STRN4Q9NRL3 753 aa10.55□□□□□ -0.72
COPS3-215ENST00000578317 THRAP3Q9Y2W1 955 aaKnown RBP10.55□□□□□ -0.72
COPS3-215ENST00000578317 MAPK8IP3Q9UPT6 1336 aa10.54□□□□□ -0.72
COPS3-215ENST00000578317 TRIM66O15016 1216 aa10.54□□□□□ -0.72
COPS3-215ENST00000578317 TMPOP42166 694 aaKnown RBP10.54□□□□□ -0.72
COPS3-215ENST00000578317 CRB1P82279 1406 aa10.54□□□□□ -0.72
COPS3-215ENST00000578317 HNRNPUQ00839 825 aaKnown RBP eCLIP10.54□□□□□ -0.72
COPS3-215ENST00000578317 SLAIN1Q8ND83 568 aa10.54□□□□□ -0.72
COPS3-215ENST00000578317 KDM4CQ9H3R0 1056 aa10.54□□□□□ -0.72
COPS3-215ENST00000578317 SCUBE2Q9NQ36 999 aa10.54□□□□□ -0.72
COPS3-215ENST00000578317 VPS72Q15906 364 aa10.53□□□□□ -0.72
COPS3-215ENST00000578317 NFE2L2Q16236 605 aa10.53□□□□□ -0.72
COPS3-215ENST00000578317 RAPGEF4Q8WZA2 1011 aa10.53□□□□□ -0.72
COPS3-215ENST00000578317 COL14A1Q05707 1796 aaKnown RBP10.53□□□□□ -0.72
COPS3-215ENST00000578317 BCL9LQ86UU0 1499 aa10.53□□□□□ -0.72
COPS3-215ENST00000578317 ZBED9Q6R2W3 1325 aa10.52□□□□□ -0.72
COPS3-215ENST00000578317 LTN1O94822 1766 aa10.52□□□□□ -0.72
COPS3-215ENST00000578317 HOXB3P14651 431 aaPredicted RBP10.52□□□□□ -0.73
COPS3-215ENST00000578317 PLEKHO1Q53GL0 409 aaPredicted RBP10.52□□□□□ -0.73
COPS3-215ENST00000578317 MEX3CQ5U5Q3 659 aaKnown RBP10.52□□□□□ -0.73
COPS3-215ENST00000578317 USHBP1Q8N6Y0 703 aa10.52□□□□□ -0.73
COPS3-215ENST00000578317 GAS2L2Q8NHY3 880 aa10.52□□□□□ -0.73
COPS3-215ENST00000578317 USP21Q9UK80 565 aa10.52□□□□□ -0.73
COPS3-215ENST00000578317 RGPD1P0DJD0 1748 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms