RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.8□□□□□ -0.044e-7■■■□□ 17.4
TRAPPC8-204ENST00000578252 USP35Q9P2H5 1018 aa14.8□□□□□ -0.04
TRAPPC8-204ENST00000578252 MEGF6O75095 1541 aa14.8□□□□□ -0.04
TRAPPC8-204ENST00000578252 C7P10643 843 aa14.79□□□□□ -0.04
TRAPPC8-204ENST00000578252 PLEKHF1Q96S99 279 aa14.79□□□□□ -0.04
TRAPPC8-204ENST00000578252 THSD7AQ9UPZ6 1657 aa14.79□□□□□ -0.04
TRAPPC8-204ENST00000578252 PLEKHO1Q53GL0 409 aaPredicted RBP14.78□□□□□ -0.04
TRAPPC8-204ENST00000578252 NGEFQ8N5V2 710 aa14.78□□□□□ -0.04
TRAPPC8-204ENST00000578252 PCDHB8Q9UN66 801 aa14.78□□□□□ -0.04
TRAPPC8-204ENST00000578252 SPG7Q9UQ90 795 aa14.78□□□□□ -0.04
TRAPPC8-204ENST00000578252 LRRC37A3O60309 1634 aa14.77□□□□□ -0.04
TRAPPC8-204ENST00000578252 GAS2L2Q8NHY3 880 aa14.77□□□□□ -0.05
TRAPPC8-204ENST00000578252 TNS2Q63HR2 1409 aa14.76□□□□□ -0.05
TRAPPC8-204ENST00000578252 SHANK3Q9BYB0 1731 aa14.76□□□□□ -0.05
TRAPPC8-204ENST00000578252 RBM6P78332 1123 aaKnown RBP14.76□□□□□ -0.05
TRAPPC8-204ENST00000578252 CCDC146Q8IYE0 955 aa14.76□□□□□ -0.05
TRAPPC8-204ENST00000578252 DLG5Q8TDM6 1919 aa14.75□□□□□ -0.05
TRAPPC8-204ENST00000578252 CHRM1P11229 460 aaPredicted RBP14.75□□□□□ -0.05
TRAPPC8-204ENST00000578252 FAM98CQ17RN3 349 aaKnown RBP14.75□□□□□ -0.05
TRAPPC8-204ENST00000578252 ZCRB1Q8TBF4 217 aaKnown RBP14.75□□□□□ -0.05
TRAPPC8-204ENST00000578252 TMEM106CQ9BVX2 250 aa14.75□□□□□ -0.05
TRAPPC8-204ENST00000578252 PCDH11XQ9BZA7 1347 aa14.74□□□□□ -0.05
TRAPPC8-204ENST00000578252 PCDH11YQ9BZA8 1340 aa14.74□□□□□ -0.05
TRAPPC8-204ENST00000578252 ONECUT3O60422 494 aaPredicted RBP14.74□□□□□ -0.05
TRAPPC8-204ENST00000578252 NFE2L2Q16236 605 aa14.74□□□□□ -0.05
TRAPPC8-204ENST00000578252 PHACTR3Q96KR7 559 aa14.74□□□□□ -0.05
TRAPPC8-204ENST00000578252 EXOC5O00471 708 aa14.73□□□□□ -0.05
TRAPPC8-204ENST00000578252 RXRBP28702 533 aa14.73□□□□□ -0.05
TRAPPC8-204ENST00000578252 LMOD3Q0VAK6 560 aa14.73□□□□□ -0.05
TRAPPC8-204ENST00000578252 DDB1Q16531 1140 aa14.73□□□□□ -0.05
TRAPPC8-204ENST00000578252 C1orf141Q5JVX7 400 aa14.73□□□□□ -0.05
TRAPPC8-204ENST00000578252 ZNF530Q6P9A1 599 aaPredicted RBP14.73□□□□□ -0.05
TRAPPC8-204ENST00000578252 TRIM35Q9UPQ4 493 aa14.73□□□□□ -0.05
TRAPPC8-204ENST00000578252 POTEB2H3BUK9 544 aa14.72□□□□□ -0.05
TRAPPC8-204ENST00000578252 APAF1O14727 1248 aa14.72□□□□□ -0.05
TRAPPC8-204ENST00000578252 TMPOP42166 694 aaKnown RBP14.72□□□□□ -0.05
TRAPPC8-204ENST00000578252 MTHFSDQ2M296 383 aaKnown RBP14.72□□□□□ -0.05
TRAPPC8-204ENST00000578252 AKAP4Q5JQC9 854 aa14.72□□□□□ -0.05
TRAPPC8-204ENST00000578252 RGS17Q9UGC6 210 aaPredicted RBP14.72□□□□□ -0.05
TRAPPC8-204ENST00000578252 MAP3K5Q99683 1374 aa14.72□□□□□ -0.05
TRAPPC8-204ENST00000578252 A0A0G2JS52 829 aa14.71□□□□□ -0.05
TRAPPC8-204ENST00000578252 HTATSF1O43719 755 aaKnown RBP14.71□□□□□ -0.05
TRAPPC8-204ENST00000578252 HSP90AB1P08238 724 aaKnown RBP14.71□□□□□ -0.05
TRAPPC8-204ENST00000578252 MYT1Q01538 1121 aa14.71□□□□□ -0.05
TRAPPC8-204ENST00000578252 ZNF467Q7Z7K2 595 aaPredicted RBP14.71□□□□□ -0.05
TRAPPC8-204ENST00000578252 IFNL2Q8IZJ0 200 aa14.71□□□□□ -0.05
TRAPPC8-204ENST00000578252 ADAMTS7Q9UKP4 1686 aa14.71□□□□□ -0.06
TRAPPC8-204ENST00000578252 VIRMAQ69YN4 1812 aaKnown RBP14.71□□□□□ -0.06
TRAPPC8-204ENST00000578252 GNAT3A8MTJ3 354 aa14.7□□□□□ -0.06
TRAPPC8-204ENST00000578252 RIPK4P57078 832 aa14.7□□□□□ -0.06
TRAPPC8-204ENST00000578252 CCDC27Q2M243 656 aa14.7□□□□□ -0.06
TRAPPC8-204ENST00000578252 PHKG2P15735 406 aa14.69□□□□□ -0.06
TRAPPC8-204ENST00000578252 HNRNPUQ00839 825 aaKnown RBP eCLIP14.69□□□□□ -0.06
TRAPPC8-204ENST00000578252 PDE3BQ13370 1112 aa14.69□□□□□ -0.06
TRAPPC8-204ENST00000578252 SEPT12Q8IYM1 358 aa14.69□□□□□ -0.06
TRAPPC8-204ENST00000578252 RTF1Q92541 710 aaKnown RBP14.69□□□□□ -0.06
TRAPPC8-204ENST00000578252 SCN11AQ9UI33 1791 aa14.69□□□□□ -0.06
TRAPPC8-204ENST00000578252 CYP27B1O15528 508 aa14.68□□□□□ -0.06
TRAPPC8-204ENST00000578252 POTEAQ6S8J7 498 aa14.68□□□□□ -0.06
TRAPPC8-204ENST00000578252 BRWD3Q6RI45 1802 aa14.68□□□□□ -0.06
TRAPPC8-204ENST00000578252 CALD1Q05682 793 aaKnown RBP14.67□□□□□ -0.06
TRAPPC8-204ENST00000578252 NKX1-1Q15270 411 aaPredicted RBP14.67□□□□□ -0.06
TRAPPC8-204ENST00000578252 NEUROD2Q15784 382 aa14.67□□□□□ -0.06
TRAPPC8-204ENST00000578252 DDX54Q8TDD1 881 aaKnown RBP14.67□□□□□ -0.06
TRAPPC8-204ENST00000578252 DCAF5Q96JK2 942 aa14.67□□□□□ -0.06
TRAPPC8-204ENST00000578252 RRP7AQ9Y3A4 280 aaKnown RBP14.67□□□□□ -0.06
TRAPPC8-204ENST00000578252 RGS12O14924 1447 aa14.66□□□□□ -0.06
TRAPPC8-204ENST00000578252 DOT1LQ8TEK3 1739 aa14.65□□□□□ -0.06
TRAPPC8-204ENST00000578252 BCL9O00512 1426 aa14.65□□□□□ -0.06
TRAPPC8-204ENST00000578252 ZBED9Q6R2W3 1325 aa14.65□□□□□ -0.06
TRAPPC8-204ENST00000578252 MRC1P22897 1456 aa14.64□□□□□ -0.07
TRAPPC8-204ENST00000578252 CEMIPQ8WUJ3 1361 aa14.64□□□□□ -0.07
TRAPPC8-204ENST00000578252 MARCH10Q8NA82 808 aaPredicted RBP14.64□□□□□ -0.07
TRAPPC8-204ENST00000578252 KDM6AO15550 1401 aaPredicted RBP14.64□□□□□ -0.07
TRAPPC8-204ENST00000578252 TOGARAM1Q9Y4F4 1720 aa14.63□□□□□ -0.07
TRAPPC8-204ENST00000578252 SIPA1L3O60292 1781 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC8-204ENST00000578252 POTEFA5A3E0 1075 aa14.63□□□□□ -0.07
TRAPPC8-204ENST00000578252 RNMTO43148 476 aaKnown RBP14.63□□□□□ -0.07
TRAPPC8-204ENST00000578252 KRT27Q7Z3Y8 459 aa14.63□□□□□ -0.07
TRAPPC8-204ENST00000578252 WDR63Q8IWG1 891 aa14.63□□□□□ -0.07
TRAPPC8-204ENST00000578252 WWC1Q8IX03 1113 aa14.63□□□□□ -0.07
TRAPPC8-204ENST00000578252 IL16Q14005 1332 aa14.63□□□□□ -0.07
TRAPPC8-204ENST00000578252 ZNF521Q96K83 1311 aa14.63□□□□□ -0.07
TRAPPC8-204ENST00000578252 ERVV-2B6SEH9 535 aa14.62□□□□□ -0.07
TRAPPC8-204ENST00000578252 TEFQ10587 303 aa14.62□□□□□ -0.07
TRAPPC8-204ENST00000578252 IER5LQ5T953 404 aa14.62□□□□□ -0.07
TRAPPC8-204ENST00000578252 MPRIPQ6WCQ1 1025 aa14.62□□□□□ -0.07
TRAPPC8-204ENST00000578252 SALL2Q9Y467 1007 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC8-204ENST00000578252 ITGB4P16144 1822 aa14.62□□□□□ -0.07
TRAPPC8-204ENST00000578252 NHSQ6T4R5 1651 aa14.61□□□□□ -0.07
TRAPPC8-204ENST00000578252 SEC24BO95487 1268 aa14.61□□□□□ -0.07
TRAPPC8-204ENST00000578252 MCM10Q7L590 875 aa14.61□□□□□ -0.07
TRAPPC8-204ENST00000578252 IL17REQ8NFR9 667 aa14.61□□□□□ -0.07
TRAPPC8-204ENST00000578252 YTHDC1Q96MU7 727 aaKnown RBP14.61□□□□□ -0.07
TRAPPC8-204ENST00000578252 SBF2Q86WG5 1849 aa14.6□□□□□ -0.07
TRAPPC8-204ENST00000578252 LGR6Q9HBX8 967 aa14.6□□□□□ -0.07
TRAPPC8-204ENST00000578252 BABAM1Q9NWV8 329 aa14.6□□□□□ -0.07
TRAPPC8-204ENST00000578252 COLQQ9Y215 455 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC8-204ENST00000578252 SENP3-EIF4A1A0A087X0R7 540 aa14.59□□□□□ -0.07
TRAPPC8-204ENST00000578252 CABP4P57796 275 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms