RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 C10orf71Q711Q0 1435 aa19.98■□□□□ 0.79
PPP4R1-206ENST00000577779 PKD1L3Q7Z443 1732 aa19.97■□□□□ 0.79
PPP4R1-206ENST00000577779 RRAGCQ9HB90 399 aa19.96■□□□□ 0.79
PPP4R1-206ENST00000577779 BRCA1P38398 1863 aaKnown RBP19.95■□□□□ 0.78
PPP4R1-206ENST00000577779 ITPK1Q13572 414 aa19.95■□□□□ 0.78
PPP4R1-206ENST00000577779 NLGN1Q8N2Q7 840 aa19.95■□□□□ 0.78
PPP4R1-206ENST00000577779 CCDC87Q9NVE4 849 aa19.95■□□□□ 0.78
PPP4R1-206ENST00000577779 HSPA1AP0DMV8 641 aaKnown RBP19.94■□□□□ 0.78
PPP4R1-206ENST00000577779 HSPA1BP0DMV9 641 aaKnown RBP19.94■□□□□ 0.78
PPP4R1-206ENST00000577779 ATP6V1AP38606 617 aa19.94■□□□□ 0.78
PPP4R1-206ENST00000577779 TMF1P82094 1093 aa19.94■□□□□ 0.78
PPP4R1-206ENST00000577779 SMC1BQ8NDV3 1235 aa19.94■□□□□ 0.78
PPP4R1-206ENST00000577779 PUS7Q96PZ0 661 aaKnown RBP19.94■□□□□ 0.78
PPP4R1-206ENST00000577779 CARD11Q9BXL7 1154 aa19.94■□□□□ 0.78
PPP4R1-206ENST00000577779 ARFGEF1Q9Y6D6 1849 aa19.94■□□□□ 0.78
PPP4R1-206ENST00000577779 TNRC6CQ9HCJ0 1690 aaKnown RBP19.94■□□□□ 0.78
PPP4R1-206ENST00000577779 SIN3AQ96ST3 1273 aa19.93■□□□□ 0.78
PPP4R1-206ENST00000577779 RNF181Q9P0P0 153 aa19.93■□□□□ 0.78
PPP4R1-206ENST00000577779 TRAPPC3LQ5T215 181 aa19.92■□□□□ 0.78
PPP4R1-206ENST00000577779 TMOD3Q9NYL9 352 aa19.92■□□□□ 0.78
PPP4R1-206ENST00000577779 C4AP0C0L4 1744 aa19.91■□□□□ 0.78
PPP4R1-206ENST00000577779 MAPK8IP2Q13387 824 aaPredicted RBP19.91■□□□□ 0.78
PPP4R1-206ENST00000577779 NEUROD1Q13562 356 aa19.91■□□□□ 0.78
PPP4R1-206ENST00000577779 HSP90AB2PQ58FF8 381 aa19.91■□□□□ 0.78
PPP4R1-206ENST00000577779 ASAP1Q9ULH1 1129 aa19.91■□□□□ 0.78
PPP4R1-206ENST00000577779 RTCBQ9Y3I0 505 aaKnown RBP19.91■□□□□ 0.78
PPP4R1-206ENST00000577779 INSRP06213 1382 aa19.91■□□□□ 0.78
PPP4R1-206ENST00000577779 KCNA3P22001 575 aa19.9■□□□□ 0.78
PPP4R1-206ENST00000577779 NKX1-1Q15270 411 aaPredicted RBP19.9■□□□□ 0.78
PPP4R1-206ENST00000577779 PARP3Q9Y6F1 533 aa19.9■□□□□ 0.78
PPP4R1-206ENST00000577779 PIM2Q9P1W9 311 aa19.89■□□□□ 0.77
PPP4R1-206ENST00000577779 DALRD3Q5D0E6 543 aaKnown RBP19.88■□□□□ 0.77
PPP4R1-206ENST00000577779 DCAF5Q96JK2 942 aa19.88■□□□□ 0.77
PPP4R1-206ENST00000577779 GGNBP2Q9H3C7 697 aa19.88■□□□□ 0.77
PPP4R1-206ENST00000577779 SPG7Q9UQ90 795 aa19.88■□□□□ 0.77
PPP4R1-206ENST00000577779 FLT4P35916 1363 aa19.87■□□□□ 0.77
PPP4R1-206ENST00000577779 GYS1P13807 737 aa19.86■□□□□ 0.77
PPP4R1-206ENST00000577779 ARHGEF1Q92888 912 aaKnown RBP19.86■□□□□ 0.77
PPP4R1-206ENST00000577779 FYB1O15117 783 aa19.85■□□□□ 0.77
PPP4R1-206ENST00000577779 RFC4P35249 363 aa19.85■□□□□ 0.77
PPP4R1-206ENST00000577779 ATG3Q9NT62 314 aa19.85■□□□□ 0.77
PPP4R1-206ENST00000577779 SBF1O95248 1867 aa19.85■□□□□ 0.77
PPP4R1-206ENST00000577779 SLC34A2O95436 690 aa19.84■□□□□ 0.77
PPP4R1-206ENST00000577779 KIF24Q5T7B8 1368 aa19.83■□□□□ 0.77
PPP4R1-206ENST00000577779 KDRP35968 1356 aa19.82■□□□□ 0.76
PPP4R1-206ENST00000577779 VEGFAP15692 232 aaPredicted RBP19.81■□□□□ 0.76
PPP4R1-206ENST00000577779 RC3H1Q5TC82 1133 aaKnown RBP19.81■□□□□ 0.76
PPP4R1-206ENST00000577779 ZC3H4Q9UPT8 1303 aaKnown RBP19.8■□□□□ 0.76
PPP4R1-206ENST00000577779 RBM42Q9BTD8 480 aaKnown RBP19.8■□□□□ 0.76
PPP4R1-206ENST00000577779 NCAPD2Q15021 1401 aa19.79■□□□□ 0.76
PPP4R1-206ENST00000577779 RPS6KA4O75676 772 aa19.79■□□□□ 0.76
PPP4R1-206ENST00000577779 CHRNA5P30532 468 aa19.79■□□□□ 0.76
PPP4R1-206ENST00000577779 IFNL2Q8IZJ0 200 aa19.79■□□□□ 0.76
PPP4R1-206ENST00000577779 SLC4A9Q96Q91 983 aa19.79■□□□□ 0.76
PPP4R1-206ENST00000577779 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.79■□□□□ 0.76
PPP4R1-206ENST00000577779 COL5A3P25940 1745 aaPredicted RBP19.79■□□□□ 0.76
PPP4R1-206ENST00000577779 CNTNAP4Q9C0A0 1308 aa19.78■□□□□ 0.76
PPP4R1-206ENST00000577779 ZNF831Q5JPB2 1677 aa19.78■□□□□ 0.76
PPP4R1-206ENST00000577779 PHKG2P15735 406 aa19.78■□□□□ 0.76
PPP4R1-206ENST00000577779 GLTPD2A6NH11 291 aa19.77■□□□□ 0.76
PPP4R1-206ENST00000577779 RASSF7Q02833 373 aa19.77■□□□□ 0.76
PPP4R1-206ENST00000577779 TESK2Q96S53 571 aa19.77■□□□□ 0.76
PPP4R1-206ENST00000577779 EMILIN1Q9Y6C2 1016 aa19.77■□□□□ 0.76
PPP4R1-206ENST00000577779 KIF20BQ96Q89 1820 aa19.76■□□□□ 0.75
PPP4R1-206ENST00000577779 LMNB1P20700 586 aa19.75■□□□□ 0.75
PPP4R1-206ENST00000577779 DDR1Q08345 913 aa19.75■□□□□ 0.75
PPP4R1-206ENST00000577779 MYH14Q7Z406 1995 aaKnown RBP19.75■□□□□ 0.75
PPP4R1-206ENST00000577779 KDM6AO15550 1401 aaPredicted RBP19.75■□□□□ 0.75
PPP4R1-206ENST00000577779 TONSLQ96HA7 1378 aa19.74■□□□□ 0.75
PPP4R1-206ENST00000577779 ST20-MTHFSA0A0A6YYL1 179 aa19.74■□□□□ 0.75
PPP4R1-206ENST00000577779 PPM1GO15355 546 aaPredicted RBP19.74■□□□□ 0.75
PPP4R1-206ENST00000577779 FKBP8Q14318 412 aa19.74■□□□□ 0.75
PPP4R1-206ENST00000577779 SRP68Q9UHB9 627 aaKnown RBP19.74■□□□□ 0.75
PPP4R1-206ENST00000577779 SLC24A1O60721 1099 aa19.73■□□□□ 0.75
PPP4R1-206ENST00000577779 EYA1Q99502 592 aa19.72■□□□□ 0.75
PPP4R1-206ENST00000577779 MKRN1Q9UHC7 482 aaKnown RBP19.72■□□□□ 0.75
PPP4R1-206ENST00000577779 TIAM2Q8IVF5 1701 aa19.71■□□□□ 0.75
PPP4R1-206ENST00000577779 ERVV-2B6SEH9 535 aa19.71■□□□□ 0.75
PPP4R1-206ENST00000577779 USP42Q9H9J4 1324 aaKnown RBP19.71■□□□□ 0.75
PPP4R1-206ENST00000577779 FOXN1O15353 648 aa19.7■□□□□ 0.74
PPP4R1-206ENST00000577779 CREBZFQ9NS37 354 aa19.7■□□□□ 0.74
PPP4R1-206ENST00000577779 POLRMTO00411 1230 aaKnown RBP19.69■□□□□ 0.74
PPP4R1-206ENST00000577779 CRKLP46109 303 aaKnown RBP19.69■□□□□ 0.74
PPP4R1-206ENST00000577779 PRDM10Q9NQV6 1147 aa19.69■□□□□ 0.74
PPP4R1-206ENST00000577779 CCDC88AQ3V6T2 1871 aa19.68■□□□□ 0.74
PPP4R1-206ENST00000577779 WASHC2AQ641Q2 1341 aa19.68■□□□□ 0.74
PPP4R1-206ENST00000577779 ANKRD26Q9UPS8 1709 aa19.67■□□□□ 0.74
PPP4R1-206ENST00000577779 POTECB2RU33 542 aa19.66■□□□□ 0.74
PPP4R1-206ENST00000577779 PTCD1O75127 700 aaKnown RBP19.66■□□□□ 0.74
PPP4R1-206ENST00000577779 TM4SF1P30408 202 aa19.66■□□□□ 0.74
PPP4R1-206ENST00000577779 AIDAQ96BJ3 306 aa19.66■□□□□ 0.74
PPP4R1-206ENST00000577779 HSP90AB1P08238 724 aaKnown RBP19.65■□□□□ 0.74
PPP4R1-206ENST00000577779 CABP4P57796 275 aa19.65■□□□□ 0.74
PPP4R1-206ENST00000577779 DPY19L2Q6NUT2 758 aa19.65■□□□□ 0.74
PPP4R1-206ENST00000577779 CTCFP49711 727 aaPredicted RBP19.64■□□□□ 0.73
PPP4R1-206ENST00000577779 CHADLQ6NUI6 762 aa19.64■□□□□ 0.73
PPP4R1-206ENST00000577779 TTLL6Q8N841 843 aa19.64■□□□□ 0.73
PPP4R1-206ENST00000577779 ZPR1O75312 459 aa19.63■□□□□ 0.73
PPP4R1-206ENST00000577779 FAM161AQ3B820 660 aa19.63■□□□□ 0.73
PPP4R1-206ENST00000577779 DLEC1Q9Y238 1755 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms