RNA–Protein interactions for RNA: ENST00000577565.1

SNRPN-208, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRPN, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-208ENST00000577565 FLT4P35916 1363 aa16.45■□□□□ 0.22
SNRPN-208ENST00000577565 KDRP35968 1356 aa16.44■□□□□ 0.22
SNRPN-208ENST00000577565 DPEP1P16444 411 aa16.44■□□□□ 0.22
SNRPN-208ENST00000577565 TGFB2P61812 414 aa16.44■□□□□ 0.22
SNRPN-208ENST00000577565 ARHGAP27Q6ZUM4 889 aa16.44■□□□□ 0.22
SNRPN-208ENST00000577565 C4AP0C0L4 1744 aa16.43■□□□□ 0.22
SNRPN-208ENST00000577565 KCPQ6ZWJ8 1503 aa16.43■□□□□ 0.22
SNRPN-208ENST00000577565 KCNA3P22001 575 aa16.42■□□□□ 0.22
SNRPN-208ENST00000577565 SLC4A9Q96Q91 983 aa16.42■□□□□ 0.22
SNRPN-208ENST00000577565 KIF24Q5T7B8 1368 aa16.41■□□□□ 0.22
SNRPN-208ENST00000577565 KIF20BQ96Q89 1820 aa16.41■□□□□ 0.22
SNRPN-208ENST00000577565 ARFGEF1Q9Y6D6 1849 aa16.41■□□□□ 0.22
SNRPN-208ENST00000577565 ST20-MTHFSA0A0A6YYL1 179 aa16.41■□□□□ 0.22
SNRPN-208ENST00000577565 ATP6V1AP38606 617 aa16.41■□□□□ 0.22
SNRPN-208ENST00000577565 C9orf131Q5VYM1 1079 aa16.41■□□□□ 0.22
SNRPN-208ENST00000577565 ATG3Q9NT62 314 aa16.41■□□□□ 0.22
SNRPN-208ENST00000577565 EMILIN1Q9Y6C2 1016 aa16.41■□□□□ 0.22
SNRPN-208ENST00000577565 FCHSD2O94868 740 aa16.4■□□□□ 0.22
SNRPN-208ENST00000577565 FSTL1Q12841 308 aa16.39■□□□□ 0.21
SNRPN-208ENST00000577565 TNS4Q8IZW8 715 aa16.39■□□□□ 0.21
SNRPN-208ENST00000577565 TMOD3Q9NYL9 352 aa16.39■□□□□ 0.21
SNRPN-208ENST00000577565 COL5A3P25940 1745 aaPredicted RBP16.39■□□□□ 0.21
SNRPN-208ENST00000577565 ANKRD26Q9UPS8 1709 aa16.39■□□□□ 0.21
SNRPN-208ENST00000577565 PLEKHG2Q9H7P9 1386 aa16.38■□□□□ 0.21
SNRPN-208ENST00000577565 GYS1P13807 737 aa16.38■□□□□ 0.21
SNRPN-208ENST00000577565 PRELPP51888 382 aa16.38■□□□□ 0.21
SNRPN-208ENST00000577565 TMF1P82094 1093 aa16.38■□□□□ 0.21
SNRPN-208ENST00000577565 PHKG2P15735 406 aa16.37■□□□□ 0.21
SNRPN-208ENST00000577565 NLGN1Q8N2Q7 840 aa16.37■□□□□ 0.21
SNRPN-208ENST00000577565 ARHGEF1Q92888 912 aaKnown RBP16.37■□□□□ 0.21
SNRPN-208ENST00000577565 TONSLQ96HA7 1378 aa16.37■□□□□ 0.21
SNRPN-208ENST00000577565 ZNF831Q5JPB2 1677 aa16.37■□□□□ 0.21
SNRPN-208ENST00000577565 TRAPPC3LQ5T215 181 aa16.36■□□□□ 0.21
SNRPN-208ENST00000577565 DCAF5Q96JK2 942 aa16.36■□□□□ 0.21
SNRPN-208ENST00000577565 CCDC87Q9NVE4 849 aa16.36■□□□□ 0.21
SNRPN-208ENST00000577565 SPG7Q9UQ90 795 aa16.36■□□□□ 0.21
SNRPN-208ENST00000577565 RTCBQ9Y3I0 505 aaKnown RBP16.36■□□□□ 0.21
SNRPN-208ENST00000577565 PCNTO95613 3336 aa16.36■□□□□ 0.21
SNRPN-208ENST00000577565 TNRC6CQ9HCJ0 1690 aaKnown RBP16.36■□□□□ 0.21
SNRPN-208ENST00000577565 MYH14Q7Z406 1995 aaKnown RBP16.35■□□□□ 0.21
SNRPN-208ENST00000577565 C16orf71Q8IYS4 520 aaPredicted RBP16.35■□□□□ 0.21
SNRPN-208ENST00000577565 EYA1Q99502 592 aa16.35■□□□□ 0.21
SNRPN-208ENST00000577565 RRAGCQ9HB90 399 aa16.35■□□□□ 0.21
SNRPN-208ENST00000577565 SBF1O95248 1867 aa16.34■□□□□ 0.21
SNRPN-208ENST00000577565 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.34■□□□□ 0.213e-8■□□□□ 11.3
SNRPN-208ENST00000577565 RNF181Q9P0P0 153 aa16.34■□□□□ 0.21
SNRPN-208ENST00000577565 CARD14Q9BXL6 1004 aa16.33■□□□□ 0.2
SNRPN-208ENST00000577565 KDM2BQ8NHM5 1336 aa16.33■□□□□ 0.2
SNRPN-208ENST00000577565 CNTNAP4Q9C0A0 1308 aa16.33■□□□□ 0.2
SNRPN-208ENST00000577565 RPS6KA4O75676 772 aa16.32■□□□□ 0.2
SNRPN-208ENST00000577565 ADRA2BP18089 450 aa16.32■□□□□ 0.2
SNRPN-208ENST00000577565 DDR1Q08345 913 aa16.32■□□□□ 0.2
SNRPN-208ENST00000577565 RC3H1Q5TC82 1133 aaKnown RBP16.32■□□□□ 0.2
SNRPN-208ENST00000577565 IFNL2Q8IZJ0 200 aa16.32■□□□□ 0.2
SNRPN-208ENST00000577565 PIM2Q9P1W9 311 aa16.32■□□□□ 0.2
SNRPN-208ENST00000577565 PARP3Q9Y6F1 533 aa16.32■□□□□ 0.2
SNRPN-208ENST00000577565 WASHC2AQ641Q2 1341 aa16.31■□□□□ 0.2
SNRPN-208ENST00000577565 HSPA1AP0DMV8 641 aaKnown RBP16.31■□□□□ 0.2
SNRPN-208ENST00000577565 HSPA1BP0DMV9 641 aaKnown RBP16.31■□□□□ 0.2
SNRPN-208ENST00000577565 CHRNA5P30532 468 aa16.31■□□□□ 0.2
SNRPN-208ENST00000577565 ADAMTS7Q9UKP4 1686 aa16.3■□□□□ 0.2
SNRPN-208ENST00000577565 RFC4P35249 363 aa16.3■□□□□ 0.2
SNRPN-208ENST00000577565 DALRD3Q5D0E6 543 aaKnown RBP16.3■□□□□ 0.2
SNRPN-208ENST00000577565 SMC1BQ8NDV3 1235 aa16.3■□□□□ 0.2
SNRPN-208ENST00000577565 RBM42Q9BTD8 480 aaKnown RBP16.3■□□□□ 0.2
SNRPN-208ENST00000577565 SRP68Q9UHB9 627 aaKnown RBP16.3■□□□□ 0.2
SNRPN-208ENST00000577565 KDM6AO15550 1401 aaPredicted RBP16.29■□□□□ 0.2
SNRPN-208ENST00000577565 PPM1GO15355 546 aaPredicted RBP16.29■□□□□ 0.2
SNRPN-208ENST00000577565 FKBP8Q14318 412 aa16.29■□□□□ 0.2
SNRPN-208ENST00000577565 RASSF7Q02833 373 aa16.28■□□□□ 0.2
SNRPN-208ENST00000577565 USP42Q9H9J4 1324 aaKnown RBP16.27■□□□□ 0.2
SNRPN-208ENST00000577565 TJP1Q07157 1748 aa16.27■□□□□ 0.19
SNRPN-208ENST00000577565 ERVV-2B6SEH9 535 aa16.26■□□□□ 0.19
SNRPN-208ENST00000577565 POLKQ9UBT6 870 aa16.26■□□□□ 0.19
SNRPN-208ENST00000577565 POLRMTO00411 1230 aaKnown RBP16.25■□□□□ 0.19
SNRPN-208ENST00000577565 SLC24A1O60721 1099 aa16.25■□□□□ 0.19
SNRPN-208ENST00000577565 CRKLP46109 303 aaKnown RBP16.25■□□□□ 0.19
SNRPN-208ENST00000577565 EIF4A2Q14240 407 aaKnown RBP16.25■□□□□ 0.19
SNRPN-208ENST00000577565 TIAM2Q8IVF5 1701 aa16.23■□□□□ 0.19
SNRPN-208ENST00000577565 TM4SF1P30408 202 aa16.23■□□□□ 0.19
SNRPN-208ENST00000577565 ZC3H4Q9UPT8 1303 aaKnown RBP16.22■□□□□ 0.19
SNRPN-208ENST00000577565 GLTPD2A6NH11 291 aa16.22■□□□□ 0.19
SNRPN-208ENST00000577565 POTECB2RU33 542 aa16.22■□□□□ 0.19
SNRPN-208ENST00000577565 PTCD1O75127 700 aaKnown RBP16.22■□□□□ 0.19
SNRPN-208ENST00000577565 DLEC1Q9Y238 1755 aa16.21■□□□□ 0.19
SNRPN-208ENST00000577565 VEGFAP15692 232 aaPredicted RBP16.21■□□□□ 0.19
SNRPN-208ENST00000577565 INTS5Q6P9B9 1019 aaKnown RBP16.21■□□□□ 0.19
SNRPN-208ENST00000577565 NRXN2Q9P2S2 1712 aa16.21■□□□□ 0.19
SNRPN-208ENST00000577565 AFDNP55196 1824 aaKnown RBP16.21■□□□□ 0.19
SNRPN-208ENST00000577565 NFKBIEO00221 500 aa16.19■□□□□ 0.18
SNRPN-208ENST00000577565 LMNB1P20700 586 aa16.19■□□□□ 0.18
SNRPN-208ENST00000577565 CABP4P57796 275 aa16.19■□□□□ 0.18
SNRPN-208ENST00000577565 HSP90AB1P08238 724 aaKnown RBP16.18■□□□□ 0.18
SNRPN-208ENST00000577565 ZNF530Q6P9A1 599 aaPredicted RBP16.18■□□□□ 0.18
SNRPN-208ENST00000577565 CCDC88AQ3V6T2 1871 aa16.18■□□□□ 0.18
SNRPN-208ENST00000577565 CARMIL3Q8ND23 1372 aa16.17■□□□□ 0.18
SNRPN-208ENST00000577565 USPL1Q5W0Q7 1092 aa16.17■□□□□ 0.18
SNRPN-208ENST00000577565 NFIXQ14938 502 aa16.16■□□□□ 0.18
SNRPN-208ENST00000577565 NFATC2IPQ8NCF5 419 aa16.16■□□□□ 0.18
SNRPN-208ENST00000577565 SOS1Q07889 1333 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms