RNA–Protein interactions for RNA: ENST00000577498.1

IFT20-204, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-204ENST00000577498 FRAT1Q92837 279 aaPredicted RBP19.41■□□□□ 0.7
IFT20-204ENST00000577498 CRBNQ96SW2 442 aa19.41■□□□□ 0.7
IFT20-204ENST00000577498 ELL2O00472 640 aaPredicted RBP19.4■□□□□ 0.7
IFT20-204ENST00000577498 HOXB7P09629 217 aa19.4■□□□□ 0.7
IFT20-204ENST00000577498 HSPA1LP34931 641 aa19.4■□□□□ 0.7
IFT20-204ENST00000577498 ARHGAP45Q92619 1136 aa19.4■□□□□ 0.7
IFT20-204ENST00000577498 CHMP4AQ9BY43 222 aa19.4■□□□□ 0.7
IFT20-204ENST00000577498 SLC52A2Q9HAB3 445 aa19.4■□□□□ 0.7
IFT20-204ENST00000577498 SPATA31A1Q5TZJ5 1347 aa19.39■□□□□ 0.69
IFT20-204ENST00000577498 SHANK3Q9BYB0 1731 aa19.39■□□□□ 0.69
IFT20-204ENST00000577498 WNK3Q9BYP7 1800 aa19.39■□□□□ 0.69
IFT20-204ENST00000577498 EIF4A1P60842 406 aaKnown RBP19.38■□□□□ 0.69
IFT20-204ENST00000577498 KRT24Q2M2I5 525 aa19.38■□□□□ 0.69
IFT20-204ENST00000577498 USP35Q9P2H5 1018 aa19.38■□□□□ 0.69
IFT20-204ENST00000577498 NOB1Q9ULX3 412 aaKnown RBP19.38■□□□□ 0.69
IFT20-204ENST00000577498 SPATA31A5Q5VU36 1347 aa19.37■□□□□ 0.69
IFT20-204ENST00000577498 SPATA31A7Q8IWB4 1347 aa19.37■□□□□ 0.69
IFT20-204ENST00000577498 ERVV-2B6SEH9 535 aa19.37■□□□□ 0.69
IFT20-204ENST00000577498 AAMPQ13685 434 aa19.37■□□□□ 0.69
IFT20-204ENST00000577498 ATF7IPQ6VMQ6 1270 aa19.37■□□□□ 0.69
IFT20-204ENST00000577498 UNC5CLQ8IV45 518 aa19.37■□□□□ 0.69
IFT20-204ENST00000577498 DZIP1LQ8IYY4 767 aaKnown RBP19.36■□□□□ 0.69
IFT20-204ENST00000577498 FNBP4Q8N3X1 1017 aaPredicted RBP19.36■□□□□ 0.69
IFT20-204ENST00000577498 LRP6O75581 1613 aa19.36■□□□□ 0.69
IFT20-204ENST00000577498 TRIM27P14373 513 aa19.35■□□□□ 0.69
IFT20-204ENST00000577498 BARGINQ6ZT62 677 aa19.35■□□□□ 0.69
IFT20-204ENST00000577498 NGLY1Q96IV0 654 aa19.35■□□□□ 0.69
IFT20-204ENST00000577498 TNS2Q63HR2 1409 aa19.34■□□□□ 0.69
IFT20-204ENST00000577498 HEG1Q9ULI3 1381 aa19.34■□□□□ 0.69
IFT20-204ENST00000577498 CABP4P57796 275 aa19.34■□□□□ 0.69
IFT20-204ENST00000577498 VPS72Q15906 364 aa19.34■□□□□ 0.69
IFT20-204ENST00000577498 CCDC30Q5VVM6 783 aa19.34■□□□□ 0.69
IFT20-204ENST00000577498 FTSJ3Q8IY81 847 aaKnown RBP19.34■□□□□ 0.69
IFT20-204ENST00000577498 PANK1Q8TE04 598 aa19.34■□□□□ 0.69
IFT20-204ENST00000577498 C8orf37Q96NL8 207 aa19.34■□□□□ 0.69
IFT20-204ENST00000577498 BCL9LQ86UU0 1499 aa19.34■□□□□ 0.69
IFT20-204ENST00000577498 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.34■□□□□ 0.69
IFT20-204ENST00000577498 API5Q9BZZ5 524 aaKnown RBP19.33■□□□□ 0.68
IFT20-204ENST00000577498 EXOC5O00471 708 aa19.32■□□□□ 0.68
IFT20-204ENST00000577498 RLBP1P12271 317 aa19.32■□□□□ 0.68
IFT20-204ENST00000577498 NFATC2IPQ8NCF5 419 aa19.32■□□□□ 0.68
IFT20-204ENST00000577498 DDX54Q8TDD1 881 aaKnown RBP19.32■□□□□ 0.68
IFT20-204ENST00000577498 CCDC136Q96JN2 1154 aa19.32■□□□□ 0.68
IFT20-204ENST00000577498 STK31Q9BXU1 1019 aa19.32■□□□□ 0.68
IFT20-204ENST00000577498 PTPRCP08575 1304 aa19.31■□□□□ 0.68
IFT20-204ENST00000577498 KCNQ3O43525 872 aa19.31■□□□□ 0.68
IFT20-204ENST00000577498 ZNF790Q6PG37 636 aa19.31■□□□□ 0.68
IFT20-204ENST00000577498 COG6Q9Y2V7 657 aa19.31■□□□□ 0.68
IFT20-204ENST00000577498 CACNA1FO60840 1977 aa19.31■□□□□ 0.68
IFT20-204ENST00000577498 MVPQ14764 893 aaKnown RBP19.3■□□□□ 0.68
IFT20-204ENST00000577498 B4GALNT3Q6L9W6 998 aa19.3■□□□□ 0.68
IFT20-204ENST00000577498 GIGYF1O75420 1035 aaPredicted RBP19.29■□□□□ 0.68
IFT20-204ENST00000577498 CLUAP1Q96AJ1 413 aa19.29■□□□□ 0.68
IFT20-204ENST00000577498 TNNQ9UQP3 1299 aa19.29■□□□□ 0.68
IFT20-204ENST00000577498 CCDC9Q9Y3X0 531 aaKnown RBP19.29■□□□□ 0.68
IFT20-204ENST00000577498 ABCC4O15439 1325 aa19.28■□□□□ 0.68
IFT20-204ENST00000577498 TCERG1O14776 1098 aaKnown RBP19.28■□□□□ 0.68
IFT20-204ENST00000577498 SLC4A2P04920 1241 aa19.28■□□□□ 0.68
IFT20-204ENST00000577498 HDGFL1Q5TGJ6 251 aa19.28■□□□□ 0.68
IFT20-204ENST00000577498 MEX3CQ5U5Q3 659 aaKnown RBP19.28■□□□□ 0.68
IFT20-204ENST00000577498 USP21Q9UK80 565 aa19.28■□□□□ 0.68
IFT20-204ENST00000577498 DDB1Q16531 1140 aa19.27■□□□□ 0.68
IFT20-204ENST00000577498 TTC5Q8N0Z6 440 aa19.27■□□□□ 0.68
IFT20-204ENST00000577498 DDX19BQ9UMR2 479 aa19.27■□□□□ 0.68
IFT20-204ENST00000577498 FMNL2Q96PY5 1086 aa19.26■□□□□ 0.67
IFT20-204ENST00000577498 CHMP4BQ9H444 224 aaKnown RBP19.26■□□□□ 0.67
IFT20-204ENST00000577498 PAPPAQ13219 1627 aa19.25■□□□□ 0.67
IFT20-204ENST00000577498 TOGARAM1Q9Y4F4 1720 aa19.25■□□□□ 0.67
IFT20-204ENST00000577498 SLC39A6Q13433 755 aa19.25■□□□□ 0.67
IFT20-204ENST00000577498 TMEM57Q8N5G2 664 aa19.25■□□□□ 0.67
IFT20-204ENST00000577498 ITPRIPQ8IWB1 547 aa19.24■□□□□ 0.67
IFT20-204ENST00000577498 PELP1Q8IZL8 1130 aaKnown RBP19.24■□□□□ 0.67
IFT20-204ENST00000577498 TMOD3Q9NYL9 352 aa19.24■□□□□ 0.67
IFT20-204ENST00000577498 RGS12O14924 1447 aa19.24■□□□□ 0.67
IFT20-204ENST00000577498 SNRPA1P09661 255 aaKnown RBP19.23■□□□□ 0.67
IFT20-204ENST00000577498 ZNF496Q96IT1 587 aaPredicted RBP19.23■□□□□ 0.67
IFT20-204ENST00000577498 UBR2Q8IWV8 1755 aa19.22■□□□□ 0.67
IFT20-204ENST00000577498 EIF2S2P20042 333 aaKnown RBP19.22■□□□□ 0.67
IFT20-204ENST00000577498 INTS3Q68E01 1043 aaKnown RBP19.22■□□□□ 0.67
IFT20-204ENST00000577498 DBF4Q9UBU7 674 aaPredicted RBP19.22■□□□□ 0.67
IFT20-204ENST00000577498 AFF2P51816 1311 aa19.22■□□□□ 0.67
IFT20-204ENST00000577498 FLIIQ13045 1269 aa19.21■□□□□ 0.67
IFT20-204ENST00000577498 G2E3Q7L622 706 aa19.21■□□□□ 0.67
IFT20-204ENST00000577498 GLI3P10071 1580 aa19.2■□□□□ 0.66
IFT20-204ENST00000577498 ATRNO75882 1429 aa19.2■□□□□ 0.66
IFT20-204ENST00000577498 NECTIN2Q92692 538 aa19.2■□□□□ 0.66
IFT20-204ENST00000577498 CHPF2Q9P2E5 772 aa19.2■□□□□ 0.66
IFT20-204ENST00000577498 KCPQ6ZWJ8 1503 aa19.2■□□□□ 0.66
IFT20-204ENST00000577498 BCL9O00512 1426 aa19.19■□□□□ 0.66
IFT20-204ENST00000577498 FAM98CQ17RN3 349 aaKnown RBP19.19■□□□□ 0.66
IFT20-204ENST00000577498 TRPC5Q9UL62 973 aaPredicted RBP19.19■□□□□ 0.66
IFT20-204ENST00000577498 ITGB4P16144 1822 aa19.18■□□□□ 0.66
IFT20-204ENST00000577498 C5P01031 1676 aa19.18■□□□□ 0.66
IFT20-204ENST00000577498 THSD7AQ9UPZ6 1657 aa19.18■□□□□ 0.66
IFT20-204ENST00000577498 PXDNLA1KZ92 1463 aa19.18■□□□□ 0.66
IFT20-204ENST00000577498 MARCH10Q8NA82 808 aaPredicted RBP19.18■□□□□ 0.66
IFT20-204ENST00000577498 PIGBQ92521 554 aa19.18■□□□□ 0.66
IFT20-204ENST00000577498 DDX21Q9NR30 783 aaKnown RBP eCLIP19.18■□□□□ 0.66
IFT20-204ENST00000577498 ZBTB40Q9NUA8 1239 aa19.18■□□□□ 0.66
IFT20-204ENST00000577498 HYPKQ9NX55 129 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms