RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 NLGN1Q8N2Q7 840 aa22.82■■□□□ 1.24
CTDNEP1-211ENST00000575783 CICQ96RK0 1608 aaPredicted RBP22.82■■□□□ 1.24
CTDNEP1-211ENST00000575783 UBR3Q6ZT12 1888 aa22.81■■□□□ 1.24
CTDNEP1-211ENST00000575783 FLT4P35916 1363 aa22.81■■□□□ 1.24
CTDNEP1-211ENST00000575783 TNS4Q8IZW8 715 aa22.8■■□□□ 1.24
CTDNEP1-211ENST00000575783 JMYQ8N9B5 988 aa22.8■■□□□ 1.24
CTDNEP1-211ENST00000575783 RTCBQ9Y3I0 505 aaKnown RBP22.8■■□□□ 1.24
CTDNEP1-211ENST00000575783 PPM1GO15355 546 aaPredicted RBP22.79■■□□□ 1.24
CTDNEP1-211ENST00000575783 FSTL1Q12841 308 aa22.79■■□□□ 1.24
CTDNEP1-211ENST00000575783 CCDC87Q9NVE4 849 aa22.79■■□□□ 1.24
CTDNEP1-211ENST00000575783 ATG3Q9NT62 314 aa22.78■■□□□ 1.24
CTDNEP1-211ENST00000575783 EMILIN1Q9Y6C2 1016 aa22.78■■□□□ 1.24
CTDNEP1-211ENST00000575783 SLC24A1O60721 1099 aa22.77■■□□□ 1.24
CTDNEP1-211ENST00000575783 ARHGEF1Q92888 912 aaKnown RBP22.77■■□□□ 1.24
CTDNEP1-211ENST00000575783 PARP3Q9Y6F1 533 aa22.77■■□□□ 1.24
CTDNEP1-211ENST00000575783 RRAGCQ9HB90 399 aa22.76■■□□□ 1.23
CTDNEP1-211ENST00000575783 C10orf71Q711Q0 1435 aa22.75■■□□□ 1.23
CTDNEP1-211ENST00000575783 RFC4P35249 363 aa22.75■■□□□ 1.23
CTDNEP1-211ENST00000575783 RBM42Q9BTD8 480 aaKnown RBP22.75■■□□□ 1.23
CTDNEP1-211ENST00000575783 KDM2BQ8NHM5 1336 aa22.75■■□□□ 1.23
CTDNEP1-211ENST00000575783 ITGB4P16144 1822 aa22.75■■□□□ 1.23
CTDNEP1-211ENST00000575783 KIF24Q5T7B8 1368 aa22.75■■□□□ 1.23
CTDNEP1-211ENST00000575783 GYS1P13807 737 aa22.74■■□□□ 1.23
CTDNEP1-211ENST00000575783 KCNA3P22001 575 aa22.74■■□□□ 1.23
CTDNEP1-211ENST00000575783 IFNL2Q8IZJ0 200 aa22.74■■□□□ 1.23
CTDNEP1-211ENST00000575783 PHKG2P15735 406 aa22.73■■□□□ 1.23
CTDNEP1-211ENST00000575783 PRELPP51888 382 aa22.73■■□□□ 1.23
CTDNEP1-211ENST00000575783 RNF181Q9P0P0 153 aa22.73■■□□□ 1.23
CTDNEP1-211ENST00000575783 PIM2Q9P1W9 311 aa22.73■■□□□ 1.23
CTDNEP1-211ENST00000575783 N4BP2Q86UW6 1770 aaPredicted RBP22.73■■□□□ 1.23
CTDNEP1-211ENST00000575783 WDR90Q96KV7 1748 aa22.72■■□□□ 1.23
CTDNEP1-211ENST00000575783 EYA1Q99502 592 aa22.72■■□□□ 1.23
CTDNEP1-211ENST00000575783 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.72■■□□□ 1.23
CTDNEP1-211ENST00000575783 TONSLQ96HA7 1378 aa22.72■■□□□ 1.23
CTDNEP1-211ENST00000575783 PLEKHG2Q9H7P9 1386 aa22.72■■□□□ 1.23
CTDNEP1-211ENST00000575783 MAP2P11137 1827 aaKnown RBP22.71■■□□□ 1.23
CTDNEP1-211ENST00000575783 DALRD3Q5D0E6 543 aaKnown RBP22.71■■□□□ 1.23
CTDNEP1-211ENST00000575783 SLC4A9Q96Q91 983 aa22.71■■□□□ 1.23
CTDNEP1-211ENST00000575783 KCPQ6ZWJ8 1503 aa22.71■■□□□ 1.23
CTDNEP1-211ENST00000575783 ADRA2BP18089 450 aa22.7■■□□□ 1.22
CTDNEP1-211ENST00000575783 RC3H1Q5TC82 1133 aaKnown RBP22.69■■□□□ 1.22
CTDNEP1-211ENST00000575783 DCAF5Q96JK2 942 aa22.69■■□□□ 1.22
CTDNEP1-211ENST00000575783 KIAA1551Q9HCM1 1747 aa22.68■■□□□ 1.22
CTDNEP1-211ENST00000575783 RPS6KA4O75676 772 aa22.68■■□□□ 1.22
CTDNEP1-211ENST00000575783 SMC1BQ8NDV3 1235 aa22.68■■□□□ 1.22
CTDNEP1-211ENST00000575783 PKD1L3Q7Z443 1732 aa22.67■■□□□ 1.22
CTDNEP1-211ENST00000575783 KIF13BQ9NQT8 1826 aa22.66■■□□□ 1.22
CTDNEP1-211ENST00000575783 NCAPD2Q15021 1401 aa22.65■■□□□ 1.22
CTDNEP1-211ENST00000575783 WASHC2AQ641Q2 1341 aa22.65■■□□□ 1.22
CTDNEP1-211ENST00000575783 CHRNA5P30532 468 aa22.65■■□□□ 1.22
CTDNEP1-211ENST00000575783 CARD14Q9BXL6 1004 aa22.65■■□□□ 1.22
CTDNEP1-211ENST00000575783 KDRP35968 1356 aa22.64■■□□□ 1.22
CTDNEP1-211ENST00000575783 CNTNAP4Q9C0A0 1308 aa22.64■■□□□ 1.22
CTDNEP1-211ENST00000575783 ERVV-2B6SEH9 535 aa22.63■■□□□ 1.21
CTDNEP1-211ENST00000575783 HSPA1AP0DMV8 641 aaKnown RBP22.63■■□□□ 1.21
CTDNEP1-211ENST00000575783 HSPA1BP0DMV9 641 aaKnown RBP22.63■■□□□ 1.21
CTDNEP1-211ENST00000575783 SRP68Q9UHB9 627 aaKnown RBP22.63■■□□□ 1.21
CTDNEP1-211ENST00000575783 C4AP0C0L4 1744 aa22.62■■□□□ 1.21
CTDNEP1-211ENST00000575783 FKBP8Q14318 412 aa22.62■■□□□ 1.21
CTDNEP1-211ENST00000575783 PTCD1O75127 700 aaKnown RBP22.6■■□□□ 1.21
CTDNEP1-211ENST00000575783 CABP4P57796 275 aa22.6■■□□□ 1.21
CTDNEP1-211ENST00000575783 DDR1Q08345 913 aa22.6■■□□□ 1.21
CTDNEP1-211ENST00000575783 CDCA8Q53HL2 280 aa22.59■■□□□ 1.21
CTDNEP1-211ENST00000575783 CRKLP46109 303 aaKnown RBP22.58■■□□□ 1.21
CTDNEP1-211ENST00000575783 RASSF7Q02833 373 aa22.58■■□□□ 1.21
CTDNEP1-211ENST00000575783 POLKQ9UBT6 870 aa22.58■■□□□ 1.21
CTDNEP1-211ENST00000575783 HSP90AB1P08238 724 aaKnown RBP22.57■■□□□ 1.2
CTDNEP1-211ENST00000575783 VEGFAP15692 232 aaPredicted RBP22.57■■□□□ 1.2
CTDNEP1-211ENST00000575783 EIF4A2Q14240 407 aaKnown RBP22.57■■□□□ 1.2
CTDNEP1-211ENST00000575783 USP42Q9H9J4 1324 aaKnown RBP22.56■■□□□ 1.2
CTDNEP1-211ENST00000575783 TNNT2P45379 298 aaPredicted RBP22.55■■□□□ 1.2
CTDNEP1-211ENST00000575783 KIF20BQ96Q89 1820 aa22.54■■□□□ 1.2
CTDNEP1-211ENST00000575783 GLTPD2A6NH11 291 aa22.54■■□□□ 1.2
CTDNEP1-211ENST00000575783 POLRMTO00411 1230 aaKnown RBP22.54■■□□□ 1.2
CTDNEP1-211ENST00000575783 PLEKHO1Q53GL0 409 aaPredicted RBP22.54■■□□□ 1.2
CTDNEP1-211ENST00000575783 LMNB1P20700 586 aa22.53■■□□□ 1.2
CTDNEP1-211ENST00000575783 ZNF530Q6P9A1 599 aaPredicted RBP22.53■■□□□ 1.2
CTDNEP1-211ENST00000575783 BRCA1P38398 1863 aaKnown RBP22.53■■□□□ 1.2
CTDNEP1-211ENST00000575783 TM4SF1P30408 202 aa22.52■■□□□ 1.2
CTDNEP1-211ENST00000575783 MTHFSP49914 203 aa22.52■■□□□ 1.2
CTDNEP1-211ENST00000575783 ZC3H4Q9UPT8 1303 aaKnown RBP22.52■■□□□ 1.2
CTDNEP1-211ENST00000575783 ARFGEF1Q9Y6D6 1849 aa22.52■■□□□ 1.2
CTDNEP1-211ENST00000575783 ZPR1O75312 459 aa22.51■■□□□ 1.19
CTDNEP1-211ENST00000575783 NFATC2IPQ8NCF5 419 aa22.51■■□□□ 1.19
CTDNEP1-211ENST00000575783 USPL1Q5W0Q7 1092 aa22.5■■□□□ 1.19
CTDNEP1-211ENST00000575783 INTS5Q6P9B9 1019 aaKnown RBP22.49■■□□□ 1.19
CTDNEP1-211ENST00000575783 TNRC6CQ9HCJ0 1690 aaKnown RBP22.49■■□□□ 1.19
CTDNEP1-211ENST00000575783 KDM6AO15550 1401 aaPredicted RBP22.48■■□□□ 1.19
CTDNEP1-211ENST00000575783 AMOTQ4VCS5 1084 aa22.47■■□□□ 1.19
CTDNEP1-211ENST00000575783 C1orf141Q5JVX7 400 aa22.47■■□□□ 1.19
CTDNEP1-211ENST00000575783 ZNF831Q5JPB2 1677 aa22.46■■□□□ 1.19
CTDNEP1-211ENST00000575783 COL5A3P25940 1745 aaPredicted RBP22.46■■□□□ 1.19
CTDNEP1-211ENST00000575783 TTLL6Q8N841 843 aa22.46■■□□□ 1.19
CTDNEP1-211ENST00000575783 MYH14Q7Z406 1995 aaKnown RBP22.45■■□□□ 1.18
CTDNEP1-211ENST00000575783 MKRN1Q9UHC7 482 aaKnown RBP22.45■■□□□ 1.18
CTDNEP1-211ENST00000575783 POTECB2RU33 542 aa22.44■■□□□ 1.18
CTDNEP1-211ENST00000575783 NFIXQ14938 502 aa22.44■■□□□ 1.18
CTDNEP1-211ENST00000575783 DPY19L2Q6NUT2 758 aa22.44■■□□□ 1.18
CTDNEP1-211ENST00000575783 C2CD5Q86YS7 1000 aa22.43■■□□□ 1.18
CTDNEP1-211ENST00000575783 DNAJC10Q8IXB1 793 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms