RNA–Protein interactions for RNA: ENST00000575033.1

EDC4-209, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 3

Gene EDC4, Length 530 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-209ENST00000575033 ATG3Q9NT62 314 aa17.41■□□□□ 0.38
EDC4-209ENST00000575033 HSP90AB1P08238 724 aaKnown RBP17.4■□□□□ 0.38
EDC4-209ENST00000575033 AEBP1Q8IUX7 1158 aa17.4■□□□□ 0.38
EDC4-209ENST00000575033 DCAF5Q96JK2 942 aa17.4■□□□□ 0.38
EDC4-209ENST00000575033 ERVV-2B6SEH9 535 aa17.39■□□□□ 0.37
EDC4-209ENST00000575033 GNPATO15228 680 aa17.39■□□□□ 0.37
EDC4-209ENST00000575033 ATP6V1AP38606 617 aa17.39■□□□□ 0.37
EDC4-209ENST00000575033 PLEKHO1Q53GL0 409 aaPredicted RBP17.39■□□□□ 0.37
EDC4-209ENST00000575033 AMER1Q5JTC6 1135 aaPredicted RBP17.39■□□□□ 0.37
EDC4-209ENST00000575033 ZNF530Q6P9A1 599 aaPredicted RBP17.39■□□□□ 0.37
EDC4-209ENST00000575033 SMIM5Q71RC9 77 aa17.39■□□□□ 0.37
EDC4-209ENST00000575033 COL5A3P25940 1745 aaPredicted RBP17.38■□□□□ 0.37
EDC4-209ENST00000575033 YBX3P16989 372 aaKnown RBP eCLIP17.38■□□□□ 0.37
EDC4-209ENST00000575033 AMOTQ4VCS5 1084 aa17.38■□□□□ 0.37
EDC4-209ENST00000575033 CD2APQ9Y5K6 639 aa17.38■□□□□ 0.37
EDC4-209ENST00000575033 IL13P35225 146 aa17.36■□□□□ 0.37
EDC4-209ENST00000575033 SULT6B1Q6IMI4 303 aa17.36■□□□□ 0.37
EDC4-209ENST00000575033 GRIN3BO60391 1043 aa17.35■□□□□ 0.37
EDC4-209ENST00000575033 C1orf141Q5JVX7 400 aa17.35■□□□□ 0.37
EDC4-209ENST00000575033 SLC4A9Q96Q91 983 aa17.35■□□□□ 0.37
EDC4-209ENST00000575033 CICQ96RK0 1608 aaPredicted RBP17.35■□□□□ 0.37
EDC4-209ENST00000575033 CABP4P57796 275 aa17.34■□□□□ 0.37
EDC4-209ENST00000575033 CNTNAP4Q9C0A0 1308 aa17.33■□□□□ 0.36
EDC4-209ENST00000575033 MTHFSP49914 203 aa17.33■□□□□ 0.36
EDC4-209ENST00000575033 RBM42Q9BTD8 480 aaKnown RBP17.33■□□□□ 0.36
EDC4-209ENST00000575033 MRC1P22897 1456 aa17.32■□□□□ 0.36
EDC4-209ENST00000575033 SCN11AQ9UI33 1791 aa17.32■□□□□ 0.36
EDC4-209ENST00000575033 C4AP0C0L4 1744 aa17.32■□□□□ 0.36
EDC4-209ENST00000575033 TJP1Q07157 1748 aa17.31■□□□□ 0.36
EDC4-209ENST00000575033 RTCBQ9Y3I0 505 aaKnown RBP17.31■□□□□ 0.36
EDC4-209ENST00000575033 PER1O15534 1290 aaPredicted RBP17.3■□□□□ 0.36
EDC4-209ENST00000575033 ADRA2BP18089 450 aa17.3■□□□□ 0.36
EDC4-209ENST00000575033 MMP10P09238 476 aa17.29■□□□□ 0.36
EDC4-209ENST00000575033 RC3H1Q5TC82 1133 aaKnown RBP17.29■□□□□ 0.36
EDC4-209ENST00000575033 KIF13BQ9NQT8 1826 aa17.28■□□□□ 0.36
EDC4-209ENST00000575033 PTCD1O75127 700 aaKnown RBP17.28■□□□□ 0.36
EDC4-209ENST00000575033 AKAP4Q5JQC9 854 aa17.28■□□□□ 0.36
EDC4-209ENST00000575033 TRAPPC3LQ5T215 181 aa17.28■□□□□ 0.36
EDC4-209ENST00000575033 NFATC2IPQ8NCF5 419 aa17.28■□□□□ 0.36
EDC4-209ENST00000575033 PXDNLA1KZ92 1463 aa17.28■□□□□ 0.36
EDC4-209ENST00000575033 COL3A1P02461 1466 aaPredicted RBP17.28■□□□□ 0.36
EDC4-209ENST00000575033 ADAMTS7Q9UKP4 1686 aa17.28■□□□□ 0.36
EDC4-209ENST00000575033 C10orf71Q711Q0 1435 aa17.28■□□□□ 0.36
EDC4-209ENST00000575033 NPC1L1Q9UHC9 1359 aa17.28■□□□□ 0.36
EDC4-209ENST00000575033 KIAA1551Q9HCM1 1747 aa17.27■□□□□ 0.36
EDC4-209ENST00000575033 CC2D1BQ5T0F9 858 aaKnown RBP17.27■□□□□ 0.36
EDC4-209ENST00000575033 MYH14Q7Z406 1995 aaKnown RBP17.27■□□□□ 0.36
EDC4-209ENST00000575033 RPS6KA4O75676 772 aa17.26■□□□□ 0.35
EDC4-209ENST00000575033 HMOX1P09601 288 aa17.26■□□□□ 0.35
EDC4-209ENST00000575033 ARHGEF1Q92888 912 aaKnown RBP17.26■□□□□ 0.35
EDC4-209ENST00000575033 ADCY9O60503 1353 aa17.26■□□□□ 0.35
EDC4-209ENST00000575033 ATP10DQ9P241 1426 aa17.25■□□□□ 0.35
EDC4-209ENST00000575033 GIGYF1O75420 1035 aaPredicted RBP17.25■□□□□ 0.35
EDC4-209ENST00000575033 CRKLP46109 303 aaKnown RBP17.25■□□□□ 0.35
EDC4-209ENST00000575033 C1QTNF8P60827 252 aa17.25■□□□□ 0.35
EDC4-209ENST00000575033 NLGN1Q8N2Q7 840 aa17.25■□□□□ 0.35
EDC4-209ENST00000575033 WWC3Q9ULE0 1092 aa17.25■□□□□ 0.35
EDC4-209ENST00000575033 DIAPH1O60610 1272 aaKnown RBP17.24■□□□□ 0.35
EDC4-209ENST00000575033 GYS1P13807 737 aa17.24■□□□□ 0.35
EDC4-209ENST00000575033 RFC4P35249 363 aa17.24■□□□□ 0.35
EDC4-209ENST00000575033 SLC52A2Q9HAB3 445 aa17.24■□□□□ 0.35
EDC4-209ENST00000575033 KCPQ6ZWJ8 1503 aa17.24■□□□□ 0.35
EDC4-209ENST00000575033 VIRMAQ69YN4 1812 aaKnown RBP17.24■□□□□ 0.35
EDC4-209ENST00000575033 USP42Q9H9J4 1324 aaKnown RBP17.21■□□□□ 0.35
EDC4-209ENST00000575033 N4BP2Q86UW6 1770 aaPredicted RBP17.21■□□□□ 0.35
EDC4-209ENST00000575033 MTHFSDQ2M296 383 aaKnown RBP17.21■□□□□ 0.35
EDC4-209ENST00000575033 LGR6Q9HBX8 967 aa17.21■□□□□ 0.35
EDC4-209ENST00000575033 UBR2Q8IWV8 1755 aa17.2■□□□□ 0.34
EDC4-209ENST00000575033 RNMTO43148 476 aaKnown RBP17.2■□□□□ 0.34
EDC4-209ENST00000575033 CCDC87Q9NVE4 849 aa17.2■□□□□ 0.34
EDC4-209ENST00000575033 SENP3-EIF4A1A0A087X0R7 540 aa17.19■□□□□ 0.34
EDC4-209ENST00000575033 TGFB2P61812 414 aa17.19■□□□□ 0.34
EDC4-209ENST00000575033 INTS5Q6P9B9 1019 aaKnown RBP17.19■□□□□ 0.34
EDC4-209ENST00000575033 SRP68Q9UHB9 627 aaKnown RBP17.19■□□□□ 0.34
EDC4-209ENST00000575033 PARP3Q9Y6F1 533 aa17.19■□□□□ 0.34
EDC4-209ENST00000575033 BRCA1P38398 1863 aaKnown RBP17.18■□□□□ 0.34
EDC4-209ENST00000575033 CNGB1Q14028 1251 aaPredicted RBP17.18■□□□□ 0.34
EDC4-209ENST00000575033 DNAJC10Q8IXB1 793 aa17.18■□□□□ 0.34
EDC4-209ENST00000575033 SLC39A6Q13433 755 aa17.17■□□□□ 0.34
EDC4-209ENST00000575033 FKBP8Q14318 412 aa17.17■□□□□ 0.34
EDC4-209ENST00000575033 SOS1Q07889 1333 aaPredicted RBP17.17■□□□□ 0.34
EDC4-209ENST00000575033 A0A0G2JLW4 131 aa17.16■□□□□ 0.34
EDC4-209ENST00000575033 U2SURPO15042 1029 aaKnown RBP17.16■□□□□ 0.34
EDC4-209ENST00000575033 DDR1Q08345 913 aa17.16■□□□□ 0.34
EDC4-209ENST00000575033 GPBP1L1Q9HC44 474 aaPredicted RBP17.16■□□□□ 0.34
EDC4-209ENST00000575033 COL15A1P39059 1388 aa17.15■□□□□ 0.34
EDC4-209ENST00000575033 CYP19A1P11511 503 aaPredicted RBP17.15■□□□□ 0.34
EDC4-209ENST00000575033 DPEP1P16444 411 aa17.15■□□□□ 0.34
EDC4-209ENST00000575033 CEP350Q5VT06 3117 aa17.15■□□□□ 0.34
EDC4-209ENST00000575033 VSIG10Q8N0Z9 540 aa17.14■□□□□ 0.33
EDC4-209ENST00000575033 GAS2L2Q8NHY3 880 aa17.14■□□□□ 0.33
EDC4-209ENST00000575033 BCS1LQ9Y276 419 aa17.14■□□□□ 0.33
EDC4-209ENST00000575033 SIPA1L3O60292 1781 aaPredicted RBP17.14■□□□□ 0.33
EDC4-209ENST00000575033 ZNF526Q8TF50 670 aaPredicted RBP17.13■□□□□ 0.33
EDC4-209ENST00000575033 ZBTB1Q9Y2K1 713 aa17.13■□□□□ 0.33
EDC4-209ENST00000575033 POLRMTO00411 1230 aaKnown RBP17.12■□□□□ 0.33
EDC4-209ENST00000575033 ZPR1O75312 459 aa17.12■□□□□ 0.33
EDC4-209ENST00000575033 USPL1Q5W0Q7 1092 aa17.12■□□□□ 0.33
EDC4-209ENST00000575033 TTC5Q8N0Z6 440 aa17.12■□□□□ 0.33
EDC4-209ENST00000575033 ARFGEF1Q9Y6D6 1849 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms