RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 ASAP1Q9ULH1 1129 aa14.29□□□□□ -0.12
LITAF-216ENST00000574848 DIAPH1O60610 1272 aaKnown RBP14.28□□□□□ -0.12
LITAF-216ENST00000574848 COL23A1Q86Y22 540 aaPredicted RBP14.28□□□□□ -0.12
LITAF-216ENST00000574848 FLAD1Q8NFF5 587 aa14.28□□□□□ -0.12
LITAF-216ENST00000574848 FHDC1Q9C0D6 1143 aaPredicted RBP14.28□□□□□ -0.12
LITAF-216ENST00000574848 TJP1Q07157 1748 aa14.27□□□□□ -0.12
LITAF-216ENST00000574848 C1orf141Q5JVX7 400 aa14.27□□□□□ -0.13
LITAF-216ENST00000574848 LINC00116Q8NCU8 138 aa14.27□□□□□ -0.13
LITAF-216ENST00000574848 SYT17Q9BSW7 474 aa14.27□□□□□ -0.13
LITAF-216ENST00000574848 POLD1P28340 1107 aa14.26□□□□□ -0.13
LITAF-216ENST00000574848 ITPK1Q13572 414 aa14.26□□□□□ -0.13
LITAF-216ENST00000574848 AKAP4Q5JQC9 854 aa14.26□□□□□ -0.13
LITAF-216ENST00000574848 AK7Q96M32 723 aa14.26□□□□□ -0.13
LITAF-216ENST00000574848 SSFA2P28290 1259 aa14.25□□□□□ -0.13
LITAF-216ENST00000574848 AMIGO3Q86WK7 504 aa14.25□□□□□ -0.13
LITAF-216ENST00000574848 UBR2Q8IWV8 1755 aa14.24□□□□□ -0.13
LITAF-216ENST00000574848 CABP4P57796 275 aa14.24□□□□□ -0.13
LITAF-216ENST00000574848 MIER1Q8N108 512 aa14.24□□□□□ -0.13
LITAF-216ENST00000574848 SLC4A9Q96Q91 983 aa14.24□□□□□ -0.13
LITAF-216ENST00000574848 SIPA1L3O60292 1781 aaPredicted RBP14.24□□□□□ -0.13
LITAF-216ENST00000574848 C4AP0C0L4 1744 aa14.24□□□□□ -0.13
LITAF-216ENST00000574848 CNTNAP4Q9C0A0 1308 aa14.23□□□□□ -0.13
LITAF-216ENST00000574848 HMOX1P09601 288 aa14.23□□□□□ -0.13
LITAF-216ENST00000574848 ATP6V1AP38606 617 aa14.23□□□□□ -0.13
LITAF-216ENST00000574848 KCPQ6ZWJ8 1503 aa14.22□□□□□ -0.13
LITAF-216ENST00000574848 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.22□□□□□ -0.13
LITAF-216ENST00000574848 CENPBP07199 599 aaPredicted RBP14.22□□□□□ -0.13
LITAF-216ENST00000574848 MYH14Q7Z406 1995 aaKnown RBP14.22□□□□□ -0.13
LITAF-216ENST00000574848 DCAF8L1A6NGE4 600 aa14.21□□□□□ -0.13
LITAF-216ENST00000574848 MTHFSDQ2M296 383 aaKnown RBP14.21□□□□□ -0.13
LITAF-216ENST00000574848 RC3H1Q5TC82 1133 aaKnown RBP14.21□□□□□ -0.13
LITAF-216ENST00000574848 SLC52A2Q9HAB3 445 aa14.21□□□□□ -0.13
LITAF-216ENST00000574848 GNPATO15228 680 aa14.2□□□□□ -0.14
LITAF-216ENST00000574848 PPP2R1AP30153 589 aa14.2□□□□□ -0.14
LITAF-216ENST00000574848 NFATC2IPQ8NCF5 419 aa14.2□□□□□ -0.14
LITAF-216ENST00000574848 CFAP53Q96M91 514 aa14.2□□□□□ -0.14
LITAF-216ENST00000574848 RNMTO43148 476 aaKnown RBP14.19□□□□□ -0.14
LITAF-216ENST00000574848 MSH5O43196 834 aa14.19□□□□□ -0.14
LITAF-216ENST00000574848 ADRA2BP18089 450 aa14.19□□□□□ -0.14
LITAF-216ENST00000574848 DDX10Q13206 875 aaKnown RBP14.19□□□□□ -0.14
LITAF-216ENST00000574848 KIF13BQ9NQT8 1826 aa14.19□□□□□ -0.14
LITAF-216ENST00000574848 CHD4Q14839 1912 aa14.19□□□□□ -0.14
LITAF-216ENST00000574848 U2SURPO15042 1029 aaKnown RBP14.18□□□□□ -0.14
LITAF-216ENST00000574848 PHF14O94880 888 aa14.18□□□□□ -0.14
LITAF-216ENST00000574848 MSL1Q68DK7 614 aa14.18□□□□□ -0.14
LITAF-216ENST00000574848 RBM42Q9BTD8 480 aaKnown RBP14.18□□□□□ -0.14
LITAF-216ENST00000574848 RSPH6AQ9H0K4 717 aa14.18□□□□□ -0.14
LITAF-216ENST00000574848 GAS2L2Q8NHY3 880 aa14.17□□□□□ -0.14
LITAF-216ENST00000574848 LGR6Q9HBX8 967 aa14.17□□□□□ -0.14
LITAF-216ENST00000574848 CEMIPQ8WUJ3 1361 aa14.17□□□□□ -0.14
LITAF-216ENST00000574848 KIAA1551Q9HCM1 1747 aa14.16□□□□□ -0.14
LITAF-216ENST00000574848 ANP32CO43423 234 aa14.16□□□□□ -0.14
LITAF-216ENST00000574848 RPS6KA4O75676 772 aa14.16□□□□□ -0.14
LITAF-216ENST00000574848 CNGB1Q14028 1251 aaPredicted RBP14.16□□□□□ -0.14
LITAF-216ENST00000574848 SMIM5Q71RC9 77 aa14.16□□□□□ -0.14
LITAF-216ENST00000574848 NLGN2Q8NFZ4 835 aa14.16□□□□□ -0.14
LITAF-216ENST00000574848 RTCBQ9Y3I0 505 aaKnown RBP14.16□□□□□ -0.14
LITAF-216ENST00000574848 CD2APQ9Y5K6 639 aa14.16□□□□□ -0.14
LITAF-216ENST00000574848 UTRNP46939 3433 aa14.15□□□□□ -0.14
LITAF-216ENST00000574848 PTCD1O75127 700 aaKnown RBP14.15□□□□□ -0.14
LITAF-216ENST00000574848 YY1P25490 414 aa14.15□□□□□ -0.14
LITAF-216ENST00000574848 NUDCQ9Y266 331 aa14.15□□□□□ -0.14
LITAF-216ENST00000574848 GNAT3A8MTJ3 354 aa14.14□□□□□ -0.15
LITAF-216ENST00000574848 PRKAR2BP31323 418 aa14.14□□□□□ -0.15
LITAF-216ENST00000574848 CRKLP46109 303 aaKnown RBP14.14□□□□□ -0.15
LITAF-216ENST00000574848 VSIG10Q8N0Z9 540 aa14.14□□□□□ -0.15
LITAF-216ENST00000574848 TRAPPC3LQ5T215 181 aa14.13□□□□□ -0.15
LITAF-216ENST00000574848 C10orf71Q711Q0 1435 aa14.13□□□□□ -0.15
LITAF-216ENST00000574848 GOLGB1Q14789 3259 aaKnown RBP14.12□□□□□ -0.15
LITAF-216ENST00000574848 FCHSD2O94868 740 aa14.12□□□□□ -0.15
LITAF-216ENST00000574848 KLHL34Q8N239 644 aa14.12□□□□□ -0.15
LITAF-216ENST00000574848 IL17REQ8NFR9 667 aa14.12□□□□□ -0.15
LITAF-216ENST00000574848 ARHGEF1Q92888 912 aaKnown RBP14.12□□□□□ -0.15
LITAF-216ENST00000574848 PHACTR3Q96KR7 559 aa14.12□□□□□ -0.15
LITAF-216ENST00000574848 GYS1P13807 737 aa14.11□□□□□ -0.15
LITAF-216ENST00000574848 SLC39A6Q13433 755 aa14.11□□□□□ -0.15
LITAF-216ENST00000574848 INTS5Q6P9B9 1019 aaKnown RBP14.11□□□□□ -0.15
LITAF-216ENST00000574848 NLGN1Q8N2Q7 840 aa14.11□□□□□ -0.15
LITAF-216ENST00000574848 SOS1Q07889 1333 aaPredicted RBP14.11□□□□□ -0.15
LITAF-216ENST00000574848 USP42Q9H9J4 1324 aaKnown RBP14.11□□□□□ -0.15
LITAF-216ENST00000574848 U2AF1L5P0DN76 240 aaPredicted RBP14.1□□□□□ -0.15
LITAF-216ENST00000574848 CYP19A1P11511 503 aaPredicted RBP14.1□□□□□ -0.15
LITAF-216ENST00000574848 U2AF1Q01081 240 aaKnown RBP eCLIP14.1□□□□□ -0.15
LITAF-216ENST00000574848 DNAJC10Q8IXB1 793 aa14.1□□□□□ -0.15
LITAF-216ENST00000574848 CCDC87Q9NVE4 849 aa14.1□□□□□ -0.15
LITAF-216ENST00000574848 SCN7AQ01118 1682 aa14.1□□□□□ -0.15
LITAF-216ENST00000574848 HEG1Q9ULI3 1381 aa14.09□□□□□ -0.15
LITAF-216ENST00000574848 CCER2I3L3R5 266 aa14.09□□□□□ -0.15
LITAF-216ENST00000574848 MMP10P09238 476 aa14.09□□□□□ -0.15
LITAF-216ENST00000574848 RFC4P35249 363 aa14.09□□□□□ -0.15
LITAF-216ENST00000574848 TEFQ10587 303 aa14.09□□□□□ -0.15
LITAF-216ENST00000574848 GPR162Q16538 588 aa14.09□□□□□ -0.15
LITAF-216ENST00000574848 PXDNLA1KZ92 1463 aa14.09□□□□□ -0.15
LITAF-216ENST00000574848 BRCA1P38398 1863 aaKnown RBP14.09□□□□□ -0.15
LITAF-216ENST00000574848 DLG5Q8TDM6 1919 aa14.09□□□□□ -0.15
LITAF-216ENST00000574848 NRXN2Q9P2S2 1712 aa14.09□□□□□ -0.15
LITAF-216ENST00000574848 YBX3P16989 372 aaKnown RBP eCLIP14.08□□□□□ -0.16
LITAF-216ENST00000574848 ZNF790Q6PG37 636 aa14.08□□□□□ -0.16
LITAF-216ENST00000574848 COL15A1P39059 1388 aa14.08□□□□□ -0.16
LITAF-216ENST00000574848 HTATSF1O43719 755 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms