RNA–Protein interactions for RNA: ENST00000573924.1

RPA1-205, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 574 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-205ENST00000573924 UTRNP46939 3433 aa10.09□□□□□ -0.79
RPA1-205ENST00000573924 YBX3P16989 372 aaKnown RBP eCLIP10.09□□□□□ -0.793e-6■■□□□ 12.7
RPA1-205ENST00000573924 HOXC9P31274 260 aa10.09□□□□□ -0.79
RPA1-205ENST00000573924 COL23A1Q86Y22 540 aaPredicted RBP10.09□□□□□ -0.79
RPA1-205ENST00000573924 LY75O60449 1722 aa10.09□□□□□ -0.79
RPA1-205ENST00000573924 A0A1W2PP64 1363 aa10.09□□□□□ -0.79
RPA1-205ENST00000573924 MAP3K19Q56UN5 1328 aa10.08□□□□□ -0.8
RPA1-205ENST00000573924 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.08□□□□□ -0.8
RPA1-205ENST00000573924 ZFP91Q96JP5 570 aaPredicted RBP10.08□□□□□ -0.8
RPA1-205ENST00000573924 CD163L1Q9NR16 1453 aa10.08□□□□□ -0.8
RPA1-205ENST00000573924 DOT1LQ8TEK3 1739 aa10.07□□□□□ -0.8
RPA1-205ENST00000573924 SHANK3Q9BYB0 1731 aa10.07□□□□□ -0.8
RPA1-205ENST00000573924 KIF24Q5T7B8 1368 aa10.07□□□□□ -0.8
RPA1-205ENST00000573924 CDCA8Q53HL2 280 aa10.07□□□□□ -0.8
RPA1-205ENST00000573924 PALLDQ8WX93 1383 aa10.06□□□□□ -0.8
RPA1-205ENST00000573924 TONSLQ96HA7 1378 aa10.06□□□□□ -0.8
RPA1-205ENST00000573924 APLP1P51693 650 aa10.06□□□□□ -0.8
RPA1-205ENST00000573924 KCNQ4P56696 695 aa10.06□□□□□ -0.8
RPA1-205ENST00000573924 MSL1Q68DK7 614 aa10.06□□□□□ -0.8
RPA1-205ENST00000573924 RASEFQ8IZ41 740 aa10.06□□□□□ -0.8
RPA1-205ENST00000573924 SIN3AQ96ST3 1273 aa10.06□□□□□ -0.8
RPA1-205ENST00000573924 NSD2O96028 1365 aa10.05□□□□□ -0.8
RPA1-205ENST00000573924 SSFA2P28290 1259 aa10.05□□□□□ -0.8
RPA1-205ENST00000573924 MPRIPQ6WCQ1 1025 aa10.05□□□□□ -0.8
RPA1-205ENST00000573924 ZNF526Q8TF50 670 aaPredicted RBP10.05□□□□□ -0.8
RPA1-205ENST00000573924 SPG7Q9UQ90 795 aa10.05□□□□□ -0.8
RPA1-205ENST00000573924 C5P01031 1676 aa10.04□□□□□ -0.8
RPA1-205ENST00000573924 REM2Q8IYK8 340 aaPredicted RBP10.04□□□□□ -0.8
RPA1-205ENST00000573924 IGSF1Q8N6C5 1336 aa10.04□□□□□ -0.8
RPA1-205ENST00000573924 ADCY9O60503 1353 aa10.03□□□□□ -0.8
RPA1-205ENST00000573924 INSRP06213 1382 aa10.03□□□□□ -0.8
RPA1-205ENST00000573924 FLT4P35916 1363 aa10.03□□□□□ -0.8
RPA1-205ENST00000573924 MEGF6O75095 1541 aa10.03□□□□□ -0.8
RPA1-205ENST00000573924 TUBGCP6Q96RT7 1819 aa10.03□□□□□ -0.8
RPA1-205ENST00000573924 TMF1P82094 1093 aa10.03□□□□□ -0.8
RPA1-205ENST00000573924 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.02□□□□□ -0.81
RPA1-205ENST00000573924 TOMM70O94826 608 aa10.02□□□□□ -0.81
RPA1-205ENST00000573924 TGFB2P61812 414 aa10.02□□□□□ -0.81
RPA1-205ENST00000573924 NBPF6Q5VWK0 638 aa10.02□□□□□ -0.81
RPA1-205ENST00000573924 ZNF467Q7Z7K2 595 aaPredicted RBP10.02□□□□□ -0.81
RPA1-205ENST00000573924 C16orf71Q8IYS4 520 aaPredicted RBP10.02□□□□□ -0.81
RPA1-205ENST00000573924 NBPF4Q96M43 638 aa10.02□□□□□ -0.81
RPA1-205ENST00000573924 PHF14O94880 888 aa10.01□□□□□ -0.81
RPA1-205ENST00000573924 PYGBP11216 843 aa10.01□□□□□ -0.81
RPA1-205ENST00000573924 NLGN1Q8N2Q7 840 aa10.01□□□□□ -0.81
RPA1-205ENST00000573924 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.01□□□□□ -0.81
RPA1-205ENST00000573924 TMOD3Q9NYL9 352 aa10.01□□□□□ -0.81
RPA1-205ENST00000573924 RRS1Q15050 365 aaKnown RBP10□□□□□ -0.81
RPA1-205ENST00000573924 WDR70Q9NW82 654 aa10□□□□□ -0.81
RPA1-205ENST00000573924 C4BP0C0L5 1744 aa9.99□□□□□ -0.81
RPA1-205ENST00000573924 ST20-MTHFSA0A0A6YYL1 179 aa9.99□□□□□ -0.81
RPA1-205ENST00000573924 LOC102724428A0A0B4J2F2 783 aa9.99□□□□□ -0.81
RPA1-205ENST00000573924 FYB1O15117 783 aa9.99□□□□□ -0.81
RPA1-205ENST00000573924 SIK1P57059 783 aa9.99□□□□□ -0.81
RPA1-205ENST00000573924 USHBP1Q8N6Y0 703 aa9.99□□□□□ -0.81
RPA1-205ENST00000573924 GGNBP2Q9H3C7 697 aa9.99□□□□□ -0.81
RPA1-205ENST00000573924 CCDC87Q9NVE4 849 aa9.99□□□□□ -0.81
RPA1-205ENST00000573924 PLEKHG2Q9H7P9 1386 aa9.99□□□□□ -0.81
RPA1-205ENST00000573924 GNPATO15228 680 aa9.98□□□□□ -0.81
RPA1-205ENST00000573924 HSP90AB1P08238 724 aaKnown RBP9.98□□□□□ -0.81
RPA1-205ENST00000573924 ATP6V1AP38606 617 aa9.98□□□□□ -0.81
RPA1-205ENST00000573924 HSP90AB2PQ58FF8 381 aa9.98□□□□□ -0.81
RPA1-205ENST00000573924 TRAPPC3LQ5T215 181 aa9.98□□□□□ -0.81
RPA1-205ENST00000573924 IFNL2Q8IZJ0 200 aa9.98□□□□□ -0.81
RPA1-205ENST00000573924 RTCBQ9Y3I0 505 aaKnown RBP9.98□□□□□ -0.81
RPA1-205ENST00000573924 KDM2BQ8NHM5 1336 aa9.98□□□□□ -0.81
RPA1-205ENST00000573924 TAF1LQ8IZX4 1826 aa9.98□□□□□ -0.81
RPA1-205ENST00000573924 KIF3CO14782 793 aa9.97□□□□□ -0.81
RPA1-205ENST00000573924 CYP27B1O15528 508 aa9.97□□□□□ -0.81
RPA1-205ENST00000573924 MMP10P09238 476 aa9.97□□□□□ -0.81
RPA1-205ENST00000573924 TMEM132AQ24JP5 1023 aa9.97□□□□□ -0.81
RPA1-205ENST00000573924 ARHGAP27Q6ZUM4 889 aa9.97□□□□□ -0.81
RPA1-205ENST00000573924 RBM46Q8TBY0 533 aaKnown RBP9.97□□□□□ -0.81
RPA1-205ENST00000573924 PIGBQ92521 554 aa9.97□□□□□ -0.81
RPA1-205ENST00000573924 TESK2Q96S53 571 aa9.97□□□□□ -0.81
RPA1-205ENST00000573924 BCS1LQ9Y276 419 aa9.97□□□□□ -0.81
RPA1-205ENST00000573924 PPM1GO15355 546 aaPredicted RBP9.96□□□□□ -0.82
RPA1-205ENST00000573924 RFC4P35249 363 aa9.96□□□□□ -0.82
RPA1-205ENST00000573924 FSTL1Q12841 308 aa9.96□□□□□ -0.82
RPA1-205ENST00000573924 PARP3Q9Y6F1 533 aa9.96□□□□□ -0.82
RPA1-205ENST00000573924 GOLGB1Q14789 3259 aaKnown RBP9.96□□□□□ -0.82
RPA1-205ENST00000573924 RGPD2P0DJD1 1756 aa9.96□□□□□ -0.82
RPA1-205ENST00000573924 RC3H1Q5TC82 1133 aaKnown RBP9.95□□□□□ -0.82
RPA1-205ENST00000573924 GTF3C3Q9Y5Q9 886 aa9.95□□□□□ -0.82
RPA1-205ENST00000573924 CICQ96RK0 1608 aaPredicted RBP9.95□□□□□ -0.82
RPA1-205ENST00000573924 UBR3Q6ZT12 1888 aa9.94□□□□□ -0.82
RPA1-205ENST00000573924 ERVV-2B6SEH9 535 aa9.94□□□□□ -0.82
RPA1-205ENST00000573924 TULP1O00294 542 aaPredicted RBP9.94□□□□□ -0.82
RPA1-205ENST00000573924 FCHSD2O94868 740 aa9.94□□□□□ -0.82
RPA1-205ENST00000573924 FBLN1P23142 703 aa9.94□□□□□ -0.82
RPA1-205ENST00000573924 PDAP1Q13442 181 aaKnown RBP9.94□□□□□ -0.82
RPA1-205ENST00000573924 PIM2Q9P1W9 311 aa9.94□□□□□ -0.82
RPA1-205ENST00000573924 WWC3Q9ULE0 1092 aa9.94□□□□□ -0.82
RPA1-205ENST00000573924 CEP350Q5VT06 3117 aa9.94□□□□□ -0.82
RPA1-205ENST00000573924 PKD1L3Q7Z443 1732 aa9.93□□□□□ -0.82
RPA1-205ENST00000573924 WASHC2AQ641Q2 1341 aa9.93□□□□□ -0.82
RPA1-205ENST00000573924 LINC00116Q8NCU8 138 aa9.93□□□□□ -0.82
RPA1-205ENST00000573924 ITGB4P16144 1822 aa9.93□□□□□ -0.82
RPA1-205ENST00000573924 ZC3H4Q9UPT8 1303 aaKnown RBP9.92□□□□□ -0.82
RPA1-205ENST00000573924 KIF20BQ96Q89 1820 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms