RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 AMER1Q5JTC6 1135 aaPredicted RBP19.53■□□□□ 0.72
TVP23A-208ENST00000573857 SMIM5Q71RC9 77 aa19.53■□□□□ 0.72
TVP23A-208ENST00000573857 AEBP1Q8IUX7 1158 aa19.53■□□□□ 0.72
TVP23A-208ENST00000573857 DCAF5Q96JK2 942 aa19.53■□□□□ 0.72
TVP23A-208ENST00000573857 UBR3Q6ZT12 1888 aa19.53■□□□□ 0.72
TVP23A-208ENST00000573857 CHD4Q14839 1912 aa19.53■□□□□ 0.72
TVP23A-208ENST00000573857 ATP6V1AP38606 617 aa19.52■□□□□ 0.72
TVP23A-208ENST00000573857 ZNF530Q6P9A1 599 aaPredicted RBP19.52■□□□□ 0.72
TVP23A-208ENST00000573857 KDRP35968 1356 aa19.52■□□□□ 0.72
TVP23A-208ENST00000573857 KDM6AO15550 1401 aaPredicted RBP19.51■□□□□ 0.71
TVP23A-208ENST00000573857 CD2APQ9Y5K6 639 aa19.51■□□□□ 0.71
TVP23A-208ENST00000573857 GNPATO15228 680 aa19.5■□□□□ 0.71
TVP23A-208ENST00000573857 YBX3P16989 372 aaKnown RBP eCLIP19.5■□□□□ 0.71
TVP23A-208ENST00000573857 IL13P35225 146 aa19.49■□□□□ 0.71
TVP23A-208ENST00000573857 SULT6B1Q6IMI4 303 aa19.49■□□□□ 0.71
TVP23A-208ENST00000573857 C1orf141Q5JVX7 400 aa19.48■□□□□ 0.71
TVP23A-208ENST00000573857 SLC4A9Q96Q91 983 aa19.48■□□□□ 0.71
TVP23A-208ENST00000573857 GRIN3BO60391 1043 aa19.47■□□□□ 0.71
TVP23A-208ENST00000573857 MTHFSP49914 203 aa19.47■□□□□ 0.71
TVP23A-208ENST00000573857 CABP4P57796 275 aa19.47■□□□□ 0.71
TVP23A-208ENST00000573857 RBM42Q9BTD8 480 aaKnown RBP19.46■□□□□ 0.71
TVP23A-208ENST00000573857 ZNF831Q5JPB2 1677 aa19.46■□□□□ 0.71
TVP23A-208ENST00000573857 PER1O15534 1290 aaPredicted RBP19.44■□□□□ 0.7
TVP23A-208ENST00000573857 RTCBQ9Y3I0 505 aaKnown RBP19.44■□□□□ 0.7
TVP23A-208ENST00000573857 RC3H1Q5TC82 1133 aaKnown RBP19.43■□□□□ 0.7
TVP23A-208ENST00000573857 CNTNAP4Q9C0A0 1308 aa19.43■□□□□ 0.7
TVP23A-208ENST00000573857 NFATC2IPQ8NCF5 419 aa19.42■□□□□ 0.7
TVP23A-208ENST00000573857 ADRA2BP18089 450 aa19.41■□□□□ 0.7
TVP23A-208ENST00000573857 CC2D1BQ5T0F9 858 aaKnown RBP19.41■□□□□ 0.7
TVP23A-208ENST00000573857 TRAPPC3LQ5T215 181 aa19.41■□□□□ 0.7
TVP23A-208ENST00000573857 COL5A3P25940 1745 aaPredicted RBP19.4■□□□□ 0.7
TVP23A-208ENST00000573857 PTCD1O75127 700 aaKnown RBP19.4■□□□□ 0.7
TVP23A-208ENST00000573857 MMP10P09238 476 aa19.4■□□□□ 0.7
TVP23A-208ENST00000573857 AKAP4Q5JQC9 854 aa19.4■□□□□ 0.7
TVP23A-208ENST00000573857 ARHGEF1Q92888 912 aaKnown RBP19.39■□□□□ 0.69
TVP23A-208ENST00000573857 RPS6KA4O75676 772 aa19.38■□□□□ 0.69
TVP23A-208ENST00000573857 HMOX1P09601 288 aa19.38■□□□□ 0.69
TVP23A-208ENST00000573857 NPC1L1Q9UHC9 1359 aa19.38■□□□□ 0.69
TVP23A-208ENST00000573857 NLGN1Q8N2Q7 840 aa19.37■□□□□ 0.69
TVP23A-208ENST00000573857 DIAPH1O60610 1272 aaKnown RBP19.36■□□□□ 0.69
TVP23A-208ENST00000573857 GYS1P13807 737 aa19.36■□□□□ 0.69
TVP23A-208ENST00000573857 RFC4P35249 363 aa19.36■□□□□ 0.69
TVP23A-208ENST00000573857 CRKLP46109 303 aaKnown RBP19.36■□□□□ 0.69
TVP23A-208ENST00000573857 SLC52A2Q9HAB3 445 aa19.36■□□□□ 0.69
TVP23A-208ENST00000573857 WWC3Q9ULE0 1092 aa19.36■□□□□ 0.69
TVP23A-208ENST00000573857 SCN11AQ9UI33 1791 aa19.36■□□□□ 0.69
TVP23A-208ENST00000573857 MRC1P22897 1456 aa19.35■□□□□ 0.69
TVP23A-208ENST00000573857 C1QTNF8P60827 252 aa19.35■□□□□ 0.69
TVP23A-208ENST00000573857 LGR6Q9HBX8 967 aa19.35■□□□□ 0.69
TVP23A-208ENST00000573857 MYH14Q7Z406 1995 aaKnown RBP19.35■□□□□ 0.69
TVP23A-208ENST00000573857 CICQ96RK0 1608 aaPredicted RBP19.34■□□□□ 0.69
TVP23A-208ENST00000573857 RNMTO43148 476 aaKnown RBP19.34■□□□□ 0.69
TVP23A-208ENST00000573857 GIGYF1O75420 1035 aaPredicted RBP19.34■□□□□ 0.69
TVP23A-208ENST00000573857 MTHFSDQ2M296 383 aaKnown RBP19.33■□□□□ 0.68
TVP23A-208ENST00000573857 PXDNLA1KZ92 1463 aa19.33■□□□□ 0.68
TVP23A-208ENST00000573857 COL3A1P02461 1466 aaPredicted RBP19.33■□□□□ 0.68
TVP23A-208ENST00000573857 C10orf71Q711Q0 1435 aa19.33■□□□□ 0.68
TVP23A-208ENST00000573857 TJP1Q07157 1748 aa19.32■□□□□ 0.68
TVP23A-208ENST00000573857 ATP10DQ9P241 1426 aa19.32■□□□□ 0.68
TVP23A-208ENST00000573857 C4AP0C0L4 1744 aa19.31■□□□□ 0.68
TVP23A-208ENST00000573857 KIF13BQ9NQT8 1826 aa19.31■□□□□ 0.68
TVP23A-208ENST00000573857 TGFB2P61812 414 aa19.31■□□□□ 0.68
TVP23A-208ENST00000573857 CNGB1Q14028 1251 aaPredicted RBP19.31■□□□□ 0.68
TVP23A-208ENST00000573857 INTS5Q6P9B9 1019 aaKnown RBP19.31■□□□□ 0.68
TVP23A-208ENST00000573857 ADCY9O60503 1353 aa19.31■□□□□ 0.68
TVP23A-208ENST00000573857 USP42Q9H9J4 1324 aaKnown RBP19.3■□□□□ 0.68
TVP23A-208ENST00000573857 SLC39A6Q13433 755 aa19.3■□□□□ 0.68
TVP23A-208ENST00000573857 CCDC87Q9NVE4 849 aa19.3■□□□□ 0.68
TVP23A-208ENST00000573857 SRP68Q9UHB9 627 aaKnown RBP19.3■□□□□ 0.68
TVP23A-208ENST00000573857 ADAMTS7Q9UKP4 1686 aa19.3■□□□□ 0.68
TVP23A-208ENST00000573857 CEP350Q5VT06 3117 aa19.29■□□□□ 0.68
TVP23A-208ENST00000573857 DNAJC10Q8IXB1 793 aa19.29■□□□□ 0.68
TVP23A-208ENST00000573857 PARP3Q9Y6F1 533 aa19.29■□□□□ 0.68
TVP23A-208ENST00000573857 KIAA1551Q9HCM1 1747 aa19.28■□□□□ 0.68
TVP23A-208ENST00000573857 A0A0G2JLW4 131 aa19.28■□□□□ 0.68
TVP23A-208ENST00000573857 U2SURPO15042 1029 aaKnown RBP19.28■□□□□ 0.68
TVP23A-208ENST00000573857 KCPQ6ZWJ8 1503 aa19.28■□□□□ 0.68
TVP23A-208ENST00000573857 SENP3-EIF4A1A0A087X0R7 540 aa19.27■□□□□ 0.68
TVP23A-208ENST00000573857 FKBP8Q14318 412 aa19.27■□□□□ 0.68
TVP23A-208ENST00000573857 CYP19A1P11511 503 aaPredicted RBP19.26■□□□□ 0.67
TVP23A-208ENST00000573857 SOS1Q07889 1333 aaPredicted RBP19.25■□□□□ 0.67
TVP23A-208ENST00000573857 DPEP1P16444 411 aa19.25■□□□□ 0.67
TVP23A-208ENST00000573857 DDR1Q08345 913 aa19.25■□□□□ 0.67
TVP23A-208ENST00000573857 N4BP2Q86UW6 1770 aaPredicted RBP19.24■□□□□ 0.67
TVP23A-208ENST00000573857 VSIG10Q8N0Z9 540 aa19.24■□□□□ 0.67
TVP23A-208ENST00000573857 GAS2L2Q8NHY3 880 aa19.24■□□□□ 0.67
TVP23A-208ENST00000573857 GPBP1L1Q9HC44 474 aaPredicted RBP19.24■□□□□ 0.67
TVP23A-208ENST00000573857 BCS1LQ9Y276 419 aa19.24■□□□□ 0.67
TVP23A-208ENST00000573857 GNAT3A8MTJ3 354 aa19.23■□□□□ 0.67
TVP23A-208ENST00000573857 ZPR1O75312 459 aa19.23■□□□□ 0.67
TVP23A-208ENST00000573857 VIRMAQ69YN4 1812 aaKnown RBP19.23■□□□□ 0.67
TVP23A-208ENST00000573857 KCNA3P22001 575 aa19.22■□□□□ 0.67
TVP23A-208ENST00000573857 USPL1Q5W0Q7 1092 aa19.22■□□□□ 0.67
TVP23A-208ENST00000573857 ZNF526Q8TF50 670 aaPredicted RBP19.22■□□□□ 0.67
TVP23A-208ENST00000573857 ZBTB1Q9Y2K1 713 aa19.22■□□□□ 0.67
TVP23A-208ENST00000573857 COL15A1P39059 1388 aa19.21■□□□□ 0.67
TVP23A-208ENST00000573857 POLRMTO00411 1230 aaKnown RBP19.21■□□□□ 0.67
TVP23A-208ENST00000573857 TM4SF1P30408 202 aa19.21■□□□□ 0.67
TVP23A-208ENST00000573857 TTC5Q8N0Z6 440 aa19.21■□□□□ 0.67
TVP23A-208ENST00000573857 IL17REQ8NFR9 667 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms