RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 LARP1Q6PKG0 1096 aaKnown RBP14.53□□□□□ -0.08
PCDHGA9-201ENST00000573521 SFPQP23246 707 aaKnown RBP eCLIP14.53□□□□□ -0.08
PCDHGA9-201ENST00000573521 CEP126Q9P2H0 1117 aa14.53□□□□□ -0.08
PCDHGA9-201ENST00000573521 TNPO1Q92973 898 aaKnown RBP14.53□□□□□ -0.08
PCDHGA9-201ENST00000573521 C14orf93Q9H972 538 aaKnown RBP14.53□□□□□ -0.08
PCDHGA9-201ENST00000573521 CTDP1Q9Y5B0 961 aaPredicted RBP14.53□□□□□ -0.08
PCDHGA9-201ENST00000573521 PTPN14Q15678 1187 aa14.53□□□□□ -0.08
PCDHGA9-201ENST00000573521 ZNF530Q6P9A1 599 aaPredicted RBP14.53□□□□□ -0.08
PCDHGA9-201ENST00000573521 RBM33Q96EV2 1170 aaKnown RBP14.53□□□□□ -0.08
PCDHGA9-201ENST00000573521 CDK5RAP3Q96JB5 506 aa14.53□□□□□ -0.08
PCDHGA9-201ENST00000573521 C1orf115Q9H7X2 142 aa14.53□□□□□ -0.08
PCDHGA9-201ENST00000573521 PAXBP1Q9Y5B6 917 aa14.53□□□□□ -0.08
PCDHGA9-201ENST00000573521 KIAA0754O94854 1291 aa14.52□□□□□ -0.08
PCDHGA9-201ENST00000573521 IMMTQ16891 758 aaKnown RBP14.52□□□□□ -0.08
PCDHGA9-201ENST00000573521 CCDC69A6NI79 296 aa14.52□□□□□ -0.09
PCDHGA9-201ENST00000573521 DNAJC2Q99543 621 aaKnown RBP14.52□□□□□ -0.09
PCDHGA9-201ENST00000573521 TMCO3Q6UWJ1 677 aa14.52□□□□□ -0.09
PCDHGA9-201ENST00000573521 AACSQ86V21 672 aa14.52□□□□□ -0.09
PCDHGA9-201ENST00000573521 CFAP43Q8NDM7 1665 aa14.51□□□□□ -0.09
PCDHGA9-201ENST00000573521 UBE2HP62256 183 aa14.51□□□□□ -0.09
PCDHGA9-201ENST00000573521 CT47A1Q5JQC4 288 aaPredicted RBP14.51□□□□□ -0.09
PCDHGA9-201ENST00000573521 PKNOX2Q96KN3 472 aa14.51□□□□□ -0.09
PCDHGA9-201ENST00000573521 AIMP1Q12904 312 aaKnown RBP14.51□□□□□ -0.09
PCDHGA9-201ENST00000573521 GPATCH8Q9UKJ3 1502 aaKnown RBP14.51□□□□□ -0.09
PCDHGA9-201ENST00000573521 TAF7Q15545 349 aaPredicted RBP14.51□□□□□ -0.09
PCDHGA9-201ENST00000573521 ZSCAN16Q9H4T2 348 aaPredicted RBP14.51□□□□□ -0.09
PCDHGA9-201ENST00000573521 CALCOCO1Q9P1Z2 691 aa14.51□□□□□ -0.09
PCDHGA9-201ENST00000573521 CCDC148Q8NFR7 591 aa14.51□□□□□ -0.09
PCDHGA9-201ENST00000573521 NUCB1Q02818 461 aa14.5□□□□□ -0.09
PCDHGA9-201ENST00000573521 BMP2KQ9NSY1 1161 aaPredicted RBP14.5□□□□□ -0.09
PCDHGA9-201ENST00000573521 TARBP1Q13395 1621 aaKnown RBP14.5□□□□□ -0.09
PCDHGA9-201ENST00000573521 TRIM27P14373 513 aa14.5□□□□□ -0.09
PCDHGA9-201ENST00000573521 EVI5LQ96CN4 794 aa14.5□□□□□ -0.09
PCDHGA9-201ENST00000573521 CTTNBP2Q8WZ74 1663 aa14.5□□□□□ -0.09
PCDHGA9-201ENST00000573521 ZRSR2Q15696 482 aaKnown RBP14.5□□□□□ -0.09
PCDHGA9-201ENST00000573521 NUDT16Q96DE0 195 aaKnown RBP14.5□□□□□ -0.09
PCDHGA9-201ENST00000573521 PTPRKQ15262 1439 aa14.5□□□□□ -0.09
PCDHGA9-201ENST00000573521 PBRM1Q86U86 1689 aa14.49□□□□□ -0.09
PCDHGA9-201ENST00000573521 SYCE3A1L190 88 aa14.49□□□□□ -0.09
PCDHGA9-201ENST00000573521 BAG4O95429 457 aaKnown RBP14.49□□□□□ -0.09
PCDHGA9-201ENST00000573521 ODF2Q5BJF6 829 aa14.49□□□□□ -0.09
PCDHGA9-201ENST00000573521 PRAG1Q86YV5 1406 aa14.49□□□□□ -0.09
PCDHGA9-201ENST00000573521 EPB41L2O43491 1005 aaKnown RBP14.49□□□□□ -0.09
PCDHGA9-201ENST00000573521 AMER1Q5JTC6 1135 aaPredicted RBP14.49□□□□□ -0.09
PCDHGA9-201ENST00000573521 KANK3Q6NY19 840 aa14.49□□□□□ -0.09
PCDHGA9-201ENST00000573521 CCDC171Q6TFL3 1326 aa14.49□□□□□ -0.09
PCDHGA9-201ENST00000573521 FGFR1OPO95684 399 aaKnown RBP14.48□□□□□ -0.09
PCDHGA9-201ENST00000573521 SPC24Q8NBT2 197 aa14.48□□□□□ -0.09
PCDHGA9-201ENST00000573521 ZNF287Q9HBT7 754 aa14.48□□□□□ -0.09
PCDHGA9-201ENST00000573521 CD109Q6YHK3 1445 aa14.48□□□□□ -0.09
PCDHGA9-201ENST00000573521 HYPKQ9NX55 129 aa14.48□□□□□ -0.09
PCDHGA9-201ENST00000573521 CASTP20810 708 aaKnown RBP14.48□□□□□ -0.09
PCDHGA9-201ENST00000573521 TTC22Q5TAA0 569 aa14.48□□□□□ -0.09
PCDHGA9-201ENST00000573521 CCDC181Q5TID7 509 aa14.48□□□□□ -0.09
PCDHGA9-201ENST00000573521 CCDC150Q8NCX0 1101 aa14.48□□□□□ -0.09
PCDHGA9-201ENST00000573521 ZNF397Q8NF99 534 aaPredicted RBP14.48□□□□□ -0.09
PCDHGA9-201ENST00000573521 SMC5Q8IY18 1101 aa14.48□□□□□ -0.09
PCDHGA9-201ENST00000573521 LRSAM1Q6UWE0 723 aa14.47□□□□□ -0.09
PCDHGA9-201ENST00000573521 GTPBP4Q9BZE4 634 aaKnown RBP14.47□□□□□ -0.09
PCDHGA9-201ENST00000573521 ADGRL1O94910 1474 aa14.47□□□□□ -0.09
PCDHGA9-201ENST00000573521 AXDND1Q5T1B0 1012 aaPredicted RBP14.47□□□□□ -0.09
PCDHGA9-201ENST00000573521 ANKRD18AQ8IVF6 992 aa14.47□□□□□ -0.09
PCDHGA9-201ENST00000573521 CNNM1Q9NRU3 951 aa14.47□□□□□ -0.09
PCDHGA9-201ENST00000573521 INTS4Q96HW7 963 aaKnown RBP14.47□□□□□ -0.09
PCDHGA9-201ENST00000573521 PIK3R4Q99570 1358 aa14.47□□□□□ -0.09
PCDHGA9-201ENST00000573521 TUBBP07437 444 aa14.46□□□□□ -0.09
PCDHGA9-201ENST00000573521 ARHGAP29Q52LW3 1261 aa14.46□□□□□ -0.09
PCDHGA9-201ENST00000573521 ZFYVE9O95405 1425 aa14.46□□□□□ -0.09
PCDHGA9-201ENST00000573521 KIF20AO95235 890 aa14.46□□□□□ -0.09
PCDHGA9-201ENST00000573521 TERF1P54274 439 aa14.46□□□□□ -0.09
PCDHGA9-201ENST00000573521 STX1AQ16623 288 aa14.46□□□□□ -0.09
PCDHGA9-201ENST00000573521 JAKMIP3Q5VZ66 844 aa14.46□□□□□ -0.09
PCDHGA9-201ENST00000573521 SYCP1Q15431 976 aa14.46□□□□□ -0.09
PCDHGA9-201ENST00000573521 BTBD11A6QL63 1104 aa14.46□□□□□ -0.1
PCDHGA9-201ENST00000573521 CABP4P57796 275 aa14.46□□□□□ -0.1
PCDHGA9-201ENST00000573521 SRRTQ9BXP5 876 aaKnown RBP14.46□□□□□ -0.1
PCDHGA9-201ENST00000573521 DBF4Q9UBU7 674 aaPredicted RBP14.46□□□□□ -0.1
PCDHGA9-201ENST00000573521 BMP15O95972 392 aa14.45□□□□□ -0.1
PCDHGA9-201ENST00000573521 HSP90AB3PQ58FF7 597 aa14.45□□□□□ -0.1
PCDHGA9-201ENST00000573521 CWC27Q6UX04 472 aaKnown RBP14.45□□□□□ -0.1
PCDHGA9-201ENST00000573521 TBC1D9Q6ZT07 1266 aa14.45□□□□□ -0.1
PCDHGA9-201ENST00000573521 ECHDC1Q9NTX5 307 aa14.45□□□□□ -0.1
PCDHGA9-201ENST00000573521 RAPGEF6Q8TEU7 1601 aa14.45□□□□□ -0.1
PCDHGA9-201ENST00000573521 RBM25P49756 843 aaKnown RBP14.45□□□□□ -0.1
PCDHGA9-201ENST00000573521 SOGA3Q5TF21 947 aa14.45□□□□□ -0.1
PCDHGA9-201ENST00000573521 UBAC1Q9BSL1 405 aa14.45□□□□□ -0.1
PCDHGA9-201ENST00000573521 DEF6Q9H4E7 631 aa14.45□□□□□ -0.1
PCDHGA9-201ENST00000573521 RNF41Q9H4P4 317 aaPredicted RBP14.45□□□□□ -0.1
PCDHGA9-201ENST00000573521 KIF5CO60282 957 aa14.45□□□□□ -0.1
PCDHGA9-201ENST00000573521 KLHL34Q8N239 644 aa14.45□□□□□ -0.1
PCDHGA9-201ENST00000573521 STX6O43752 255 aa14.44□□□□□ -0.1
PCDHGA9-201ENST00000573521 C20orf194Q5TEA3 1177 aa14.44□□□□□ -0.1
PCDHGA9-201ENST00000573521 KIAA0556O60303 1618 aa14.44□□□□□ -0.1
PCDHGA9-201ENST00000573521 RNF123Q5XPI4 1314 aa14.44□□□□□ -0.1
PCDHGA9-201ENST00000573521 ATL3Q6DD88 541 aa14.44□□□□□ -0.1
PCDHGA9-201ENST00000573521 DNAAF4Q8WXU2 420 aa14.44□□□□□ -0.1
PCDHGA9-201ENST00000573521 TTC21AQ8NDW8 1320 aa14.43□□□□□ -0.1
PCDHGA9-201ENST00000573521 HSP90AB2PQ58FF8 381 aa14.43□□□□□ -0.1
PCDHGA9-201ENST00000573521 BMS1Q14692 1282 aaKnown RBP14.43□□□□□ -0.1
PCDHGA9-201ENST00000573521 EHBP1Q8NDI1 1231 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms