RNA–Protein interactions for RNA: ENST00000572543.5

CAMTA2-208, Transcript of calmodulin binding transcription activator 2, human

APPRIS ALT2 TSL 5 BASIC

Gene CAMTA2, Length 4,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAMTA2-208	ENST00000572543	TAF7L	Q5H9L4	462 aa		13.94	□□□□□ -0.18
CAMTA2-208	ENST00000572543	CEP85	Q6P2H3	762 aa		13.94	□□□□□ -0.18
CAMTA2-208	ENST00000572543	GOLGA6L1	Q8N7Z2	621 aa		13.94	□□□□□ -0.18
CAMTA2-208	ENST00000572543	ZNF396	Q96N95	335 aa	Predicted RBP	13.94	□□□□□ -0.18
CAMTA2-208	ENST00000572543	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.93	□□□□□ -0.18
CAMTA2-208	ENST00000572543	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.93	□□□□□ -0.18
CAMTA2-208	ENST00000572543	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
CAMTA2-208	ENST00000572543	CCDC9	Q9Y3X0	531 aa	Known RBP	13.92	□□□□□ -0.18
CAMTA2-208	ENST00000572543	SYNE3	Q6ZMZ3	975 aa		13.92	□□□□□ -0.18
CAMTA2-208	ENST00000572543	CFAP45	Q9UL16	551 aa		13.92	□□□□□ -0.18
CAMTA2-208	ENST00000572543	LRRFIP2	Q9Y608	721 aa	Known RBP	13.92	□□□□□ -0.18
CAMTA2-208	ENST00000572543	TRPM2	O94759	1503 aa		13.92	□□□□□ -0.18
CAMTA2-208	ENST00000572543	POGZ	Q7Z3K3	1410 aa		13.92	□□□□□ -0.18
CAMTA2-208	ENST00000572543	CCP110	O43303	1012 aa		13.92	□□□□□ -0.18
CAMTA2-208	ENST00000572543	HCLS1	P14317	486 aa	Predicted RBP	13.92	□□□□□ -0.18
CAMTA2-208	ENST00000572543	RIC3	Q7Z5B4	369 aa		13.92	□□□□□ -0.18
CAMTA2-208	ENST00000572543	LMBRD1	Q9NUN5	540 aa		13.92	□□□□□ -0.18
CAMTA2-208	ENST00000572543	ZNF518A	Q6AHZ1	1483 aa		13.92	□□□□□ -0.18
CAMTA2-208	ENST00000572543	FOSB	P53539	338 aa		13.92	□□□□□ -0.18
CAMTA2-208	ENST00000572543	FLII	Q13045	1269 aa		13.92	□□□□□ -0.18
CAMTA2-208	ENST00000572543	GNAT3	A8MTJ3	354 aa		13.91	□□□□□ -0.18
CAMTA2-208	ENST00000572543	ZSCAN22	P10073	491 aa	Predicted RBP	13.91	□□□□□ -0.18
CAMTA2-208	ENST00000572543	GAS2L3	Q86XJ1	694 aa		13.91	□□□□□ -0.18
CAMTA2-208	ENST00000572543	FBXW7	Q969H0	707 aa		13.91	□□□□□ -0.18
CAMTA2-208	ENST00000572543	PLXNC1	O60486	1568 aa		13.91	□□□□□ -0.18
CAMTA2-208	ENST00000572543	CBX1	P83916	185 aa		13.91	□□□□□ -0.18
CAMTA2-208	ENST00000572543	KRT32	Q14532	448 aa		13.91	□□□□□ -0.18
CAMTA2-208	ENST00000572543	USP48	Q86UV5	1035 aa		13.91	□□□□□ -0.18
CAMTA2-208	ENST00000572543	PHACTR3	Q96KR7	559 aa		13.91	□□□□□ -0.18
CAMTA2-208	ENST00000572543	HOOK1	Q9UJC3	728 aa	Known RBP	13.91	□□□□□ -0.18
CAMTA2-208	ENST00000572543	CDC42BPA	Q5VT25	1732 aa		13.91	□□□□□ -0.18
CAMTA2-208	ENST00000572543	CCAR2	Q8N163	923 aa	Known RBP	13.9	□□□□□ -0.18
CAMTA2-208	ENST00000572543	PRDM10	Q9NQV6	1147 aa		13.9	□□□□□ -0.18
CAMTA2-208	ENST00000572543	FBLN1	P23142	703 aa		13.9	□□□□□ -0.18
CAMTA2-208	ENST00000572543	PRPF40B	Q6NWY9	871 aa	Known RBP	13.9	□□□□□ -0.18
CAMTA2-208	ENST00000572543	TTC21B	Q7Z4L5	1316 aa		13.9	□□□□□ -0.18
CAMTA2-208	ENST00000572543	AACS	Q86V21	672 aa		13.9	□□□□□ -0.18
CAMTA2-208	ENST00000572543	PREX2	Q70Z35	1606 aa		13.9	□□□□□ -0.18
CAMTA2-208	ENST00000572543	TRIM29	Q14134	588 aa		13.9	□□□□□ -0.19
CAMTA2-208	ENST00000572543	STK3	Q13188	491 aa		13.89	□□□□□ -0.19
CAMTA2-208	ENST00000572543	TSHZ3	Q63HK5	1081 aa		13.89	□□□□□ -0.19
CAMTA2-208	ENST00000572543	FERMT3	Q86UX7	667 aa		13.89	□□□□□ -0.19
CAMTA2-208	ENST00000572543	DDX19A	Q9NUU7	478 aa	Known RBP	13.89	□□□□□ -0.19
CAMTA2-208	ENST00000572543	MYOM2	P54296	1465 aa		13.89	□□□□□ -0.19
CAMTA2-208	ENST00000572543	ATP7A	Q04656	1500 aa		13.89	□□□□□ -0.19
CAMTA2-208	ENST00000572543	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.89	□□□□□ -0.19	9e-7	■■■□□ 17.5
CAMTA2-208	ENST00000572543	LAMC1	P11047	1609 aa		13.89	□□□□□ -0.19
CAMTA2-208	ENST00000572543	IQGAP3	Q86VI3	1631 aa		13.89	□□□□□ -0.19
CAMTA2-208	ENST00000572543	SMC2	O95347	1197 aa		13.89	□□□□□ -0.19
CAMTA2-208	ENST00000572543	AIMP1	Q12904	312 aa	Known RBP	13.89	□□□□□ -0.19
CAMTA2-208	ENST00000572543	KIF24	Q5T7B8	1368 aa		13.89	□□□□□ -0.19
CAMTA2-208	ENST00000572543	TPM1	P09493	284 aa		13.88	□□□□□ -0.19
CAMTA2-208	ENST00000572543	CEP57L1	Q8IYX8	460 aa		13.88	□□□□□ -0.19
CAMTA2-208	ENST00000572543	TTC5	Q8N0Z6	440 aa		13.88	□□□□□ -0.19
CAMTA2-208	ENST00000572543	KIF2A	O00139	706 aa	Predicted RBP	13.88	□□□□□ -0.19
CAMTA2-208	ENST00000572543	CAMK4	Q16566	473 aa		13.88	□□□□□ -0.19
CAMTA2-208	ENST00000572543	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.88	□□□□□ -0.19
CAMTA2-208	ENST00000572543	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.88	□□□□□ -0.19
CAMTA2-208	ENST00000572543	GJB2	P29033	226 aa		13.88	□□□□□ -0.19
CAMTA2-208	ENST00000572543	TAF3	Q5VWG9	929 aa		13.88	□□□□□ -0.19
CAMTA2-208	ENST00000572543	CEBPZ	Q03701	1054 aa	Known RBP	13.88	□□□□□ -0.19
CAMTA2-208	ENST00000572543	TRDN	Q13061	729 aa		13.88	□□□□□ -0.19
CAMTA2-208	ENST00000572543	PPP4R3B	Q5MIZ7	849 aa		13.88	□□□□□ -0.19
CAMTA2-208	ENST00000572543	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.88	□□□□□ -0.19
CAMTA2-208	ENST00000572543	MYO5C	Q9NQX4	1742 aa		13.87	□□□□□ -0.19
CAMTA2-208	ENST00000572543	NUTM2G	Q5VZR2	741 aa		13.87	□□□□□ -0.19
CAMTA2-208	ENST00000572543	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
CAMTA2-208	ENST00000572543	ZNF500	O60304	480 aa	Predicted RBP	13.87	□□□□□ -0.19
CAMTA2-208	ENST00000572543	ATP8B2	P98198	1209 aa		13.87	□□□□□ -0.19
CAMTA2-208	ENST00000572543	TAF7	Q15545	349 aa	Predicted RBP	13.87	□□□□□ -0.19
CAMTA2-208	ENST00000572543	ABCC4	O15439	1325 aa		13.87	□□□□□ -0.19
CAMTA2-208	ENST00000572543	STK38	Q15208	465 aa		13.87	□□□□□ -0.19
CAMTA2-208	ENST00000572543	CNPY2	Q9Y2B0	182 aa		13.87	□□□□□ -0.19
CAMTA2-208	ENST00000572543	OLFM4	Q6UX06	510 aa		13.86	□□□□□ -0.19
CAMTA2-208	ENST00000572543	ABTB2	Q8N961	1025 aa		13.86	□□□□□ -0.19
CAMTA2-208	ENST00000572543	ZNF830	Q96NB3	372 aa	Predicted RBP	13.86	□□□□□ -0.19
CAMTA2-208	ENST00000572543	CGN	Q9P2M7	1197 aa	Known RBP	13.86	□□□□□ -0.19
CAMTA2-208	ENST00000572543	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.86	□□□□□ -0.19
CAMTA2-208	ENST00000572543	UNC13B	O14795	1591 aa		13.86	□□□□□ -0.19
CAMTA2-208	ENST00000572543	NEMF	O60524	1076 aa		13.86	□□□□□ -0.19
CAMTA2-208	ENST00000572543	GIMAP6	Q6P9H5	292 aa		13.86	□□□□□ -0.19
CAMTA2-208	ENST00000572543	CAVIN2	O95810	425 aa		13.86	□□□□□ -0.19
CAMTA2-208	ENST00000572543	TNNT1	P13805	278 aa		13.86	□□□□□ -0.19
CAMTA2-208	ENST00000572543	ME1	P48163	572 aa		13.86	□□□□□ -0.19
CAMTA2-208	ENST00000572543	RALYL	Q86SE5	291 aa	Known RBP	13.86	□□□□□ -0.19
CAMTA2-208	ENST00000572543	PLEKHF1	Q96S99	279 aa		13.86	□□□□□ -0.19
CAMTA2-208	ENST00000572543	CCDC94	Q9BW85	323 aa	Predicted RBP	13.86	□□□□□ -0.19
CAMTA2-208	ENST00000572543	BRPF1	P55201	1214 aa	Predicted RBP	13.86	□□□□□ -0.19
CAMTA2-208	ENST00000572543	FILIP1	Q7Z7B0	1213 aa		13.86	□□□□□ -0.19
CAMTA2-208	ENST00000572543	TTC12	Q9H892	705 aa	Predicted RBP	13.86	□□□□□ -0.19
CAMTA2-208	ENST00000572543	ABCC1	P33527	1531 aa		13.85	□□□□□ -0.19
CAMTA2-208	ENST00000572543	DHX16	O60231	1041 aa	Known RBP	13.85	□□□□□ -0.19
CAMTA2-208	ENST00000572543	F13A1	P00488	732 aa		13.85	□□□□□ -0.19
CAMTA2-208	ENST00000572543	PTPN14	Q15678	1187 aa		13.85	□□□□□ -0.19
CAMTA2-208	ENST00000572543	NEUROD6	Q96NK8	337 aa		13.85	□□□□□ -0.19
CAMTA2-208	ENST00000572543	DNAJC2	Q99543	621 aa	Known RBP	13.85	□□□□□ -0.19
CAMTA2-208	ENST00000572543	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.85	□□□□□ -0.19
CAMTA2-208	ENST00000572543	CHML	P26374	656 aa		13.85	□□□□□ -0.19
CAMTA2-208	ENST00000572543	CLIP2	Q9UDT6	1046 aa		13.85	□□□□□ -0.19
CAMTA2-208	ENST00000572543	SPG7	Q9UQ90	795 aa		13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms